RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
VPS26A-205ENST00000489656 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
VPS26A-205ENST00000489656 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
VPS26A-205ENST00000489656 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
VPS26A-205ENST00000489656 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
VPS26A-205ENST00000489656 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
VPS26A-205ENST00000489656 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
VPS26A-205ENST00000489656 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.03
VPS26A-205ENST00000489656 CROCC2H7BZ55 1655 aa21.45■■□□□ 1.02
VPS26A-205ENST00000489656 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
VPS26A-205ENST00000489656 SAMD9LQ8IVG5 1584 aa21.43■■□□□ 1.02
VPS26A-205ENST00000489656 PLCH2O75038 1416 aa21.42■■□□□ 1.02
VPS26A-205ENST00000489656 KCNH8Q96L42 1107 aa21.42■■□□□ 1.02
VPS26A-205ENST00000489656 CFDP1Q9UEE9 299 aaPredicted RBP21.42■■□□□ 1.02
VPS26A-205ENST00000489656 GLI2P10070 1586 aa21.41■■□□□ 1.02
VPS26A-205ENST00000489656 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
VPS26A-205ENST00000489656 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
VPS26A-205ENST00000489656 ADGBQ8N7X0 1667 aa21.38■■□□□ 1.01
VPS26A-205ENST00000489656 MAP3K4Q9Y6R4 1608 aa21.37■■□□□ 1.01
VPS26A-205ENST00000489656 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
VPS26A-205ENST00000489656 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
VPS26A-205ENST00000489656 PLEKHH2Q8IVE3 1493 aa21.36■■□□□ 1.01
VPS26A-205ENST00000489656 DAPK1P53355 1430 aa21.35■■□□□ 1.01
VPS26A-205ENST00000489656 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
VPS26A-205ENST00000489656 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
VPS26A-205ENST00000489656 ZNF644Q9H582 1327 aaPredicted RBP21.33■■□□□ 1.01
VPS26A-205ENST00000489656 KIF13AQ9H1H9 1805 aa21.33■■□□□ 1.01
VPS26A-205ENST00000489656 ABCC1P33527 1531 aa21.33■■□□□ 1
VPS26A-205ENST00000489656 ABCC5O15440 1437 aa21.32■■□□□ 1
VPS26A-205ENST00000489656 AKNAQ7Z591 1439 aa21.32■■□□□ 1
VPS26A-205ENST00000489656 KIAA1107Q9UPP5 1409 aa21.32■■□□□ 1
VPS26A-205ENST00000489656 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
VPS26A-205ENST00000489656 MBD5Q9P267 1494 aa21.3■■□□□ 1
VPS26A-205ENST00000489656 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
VPS26A-205ENST00000489656 ITGAEP38570 1179 aa21.29■■□□□ 1
VPS26A-205ENST00000489656 EFCAB2Q5VUJ9 269 aa21.29■■□□□ 1
VPS26A-205ENST00000489656 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
VPS26A-205ENST00000489656 MAST1Q9Y2H9 1570 aa21.28■■□□□ 1
VPS26A-205ENST00000489656 ZNF777Q9ULD5 760 aaPredicted RBP21.28■■□□□ 1
VPS26A-205ENST00000489656 CD109Q6YHK3 1445 aa21.28■■□□□ 1
VPS26A-205ENST00000489656 FANCAO15360 1455 aa21.27■■□□□ 1
VPS26A-205ENST00000489656 HFM1A2PYH4 1435 aa21.27■■□□□ 1
VPS26A-205ENST00000489656 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
VPS26A-205ENST00000489656 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
VPS26A-205ENST00000489656 ROCK1Q13464 1354 aa21.26■□□□□ 0.99
VPS26A-205ENST00000489656 RSPH4AQ5TD94 716 aa21.25■□□□□ 0.99
VPS26A-205ENST00000489656 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
VPS26A-205ENST00000489656 PPRC1Q5VV67 1664 aaKnown RBP21.23■□□□□ 0.99
VPS26A-205ENST00000489656 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
VPS26A-205ENST00000489656 NAIPQ13075 1403 aa21.21■□□□□ 0.99
VPS26A-205ENST00000489656 NEO1Q92859 1461 aa21.21■□□□□ 0.99
VPS26A-205ENST00000489656 TSPOAP1O95153 1857 aa21.2■□□□□ 0.98
VPS26A-205ENST00000489656 HRCP23327 699 aa21.19■□□□□ 0.98
VPS26A-205ENST00000489656 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
VPS26A-205ENST00000489656 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
VPS26A-205ENST00000489656 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
VPS26A-205ENST00000489656 ADGRL1O94910 1474 aa21.18■□□□□ 0.98
VPS26A-205ENST00000489656 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.982e-7■■■■■ 29.2
VPS26A-205ENST00000489656 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
VPS26A-205ENST00000489656 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.97
VPS26A-205ENST00000489656 TRAPPC8Q9Y2L5 1435 aa21.13■□□□□ 0.97
VPS26A-205ENST00000489656 ANKRD30AQ9BXX3 1397 aa21.13■□□□□ 0.97
VPS26A-205ENST00000489656 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
VPS26A-205ENST00000489656 CHIC2Q9UKJ5 165 aa21.13■□□□□ 0.97
VPS26A-205ENST00000489656 KDM5CP41229 1560 aa21.12■□□□□ 0.97
VPS26A-205ENST00000489656 TSPY4P0CV99 314 aa21.12■□□□□ 0.97
VPS26A-205ENST00000489656 TSPY10P0CW01 314 aa21.12■□□□□ 0.97
VPS26A-205ENST00000489656 TEX14Q8IWB6 1497 aa21.12■□□□□ 0.97
VPS26A-205ENST00000489656 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
VPS26A-205ENST00000489656 SCAPERQ9BY12 1400 aa21.12■□□□□ 0.97
VPS26A-205ENST00000489656 KDM6BO15054 1643 aa21.11■□□□□ 0.97
VPS26A-205ENST00000489656 ZFYVE16Q7Z3T8 1539 aa21.11■□□□□ 0.97
VPS26A-205ENST00000489656 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
VPS26A-205ENST00000489656 ZNF518AQ6AHZ1 1483 aa21.09■□□□□ 0.97
VPS26A-205ENST00000489656 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.97
VPS26A-205ENST00000489656 RRP7BPQ9NSQ0 103 aa21.08■□□□□ 0.97
VPS26A-205ENST00000489656 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.96
VPS26A-205ENST00000489656 POGZQ7Z3K3 1410 aa21.07■□□□□ 0.96
VPS26A-205ENST00000489656 ATP7AQ04656 1500 aa21.07■□□□□ 0.96
VPS26A-205ENST00000489656 HECW2Q9P2P5 1572 aa21.05■□□□□ 0.96
VPS26A-205ENST00000489656 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
VPS26A-205ENST00000489656 DENND4BO75064 1496 aaPredicted RBP21.03■□□□□ 0.96
VPS26A-205ENST00000489656 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
VPS26A-205ENST00000489656 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
VPS26A-205ENST00000489656 ANKRD50Q9ULJ7 1429 aa21.02■□□□□ 0.96
VPS26A-205ENST00000489656 FRMPD1Q5SYB0 1578 aa21.02■□□□□ 0.95
VPS26A-205ENST00000489656 SPAG9O60271 1321 aaKnown RBP21.01■□□□□ 0.95
VPS26A-205ENST00000489656 MLH3Q9UHC1 1453 aa21.01■□□□□ 0.95
VPS26A-205ENST00000489656 ZMYM4Q5VZL5 1548 aa21■□□□□ 0.95
VPS26A-205ENST00000489656 AFAP1Q8N556 730 aa21■□□□□ 0.95
VPS26A-205ENST00000489656 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
VPS26A-205ENST00000489656 EIF2AK4Q9P2K8 1649 aaKnown RBP20.98■□□□□ 0.95
VPS26A-205ENST00000489656 CLSPNQ9HAW4 1339 aa20.98■□□□□ 0.95
VPS26A-205ENST00000489656 UNC13BO14795 1591 aa20.97■□□□□ 0.95
VPS26A-205ENST00000489656 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
VPS26A-205ENST00000489656 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
VPS26A-205ENST00000489656 ABCA6Q8N139 1617 aa20.95■□□□□ 0.94
VPS26A-205ENST00000489656 BCORL1Q5H9F3 1711 aa20.94■□□□□ 0.94
VPS26A-205ENST00000489656 DEPDC5O75140 1603 aa20.93■□□□□ 0.94
VPS26A-205ENST00000489656 MAGI2Q86UL8 1455 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms