RNA–Protein interactions for RNA: ENST00000489582.5

MMP11-211, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-211ENST00000489582 FANCAO15360 1455 aa23.42■■□□□ 1.34
MMP11-211ENST00000489582 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
MMP11-211ENST00000489582 PHLDB1Q86UU1 1377 aa23.39■■□□□ 1.33
MMP11-211ENST00000489582 ARAP3Q8WWN8 1544 aa23.38■■□□□ 1.33
MMP11-211ENST00000489582 PREX2Q70Z35 1606 aa23.37■■□□□ 1.33
MMP11-211ENST00000489582 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
MMP11-211ENST00000489582 CDC42BPBQ9Y5S2 1711 aa23.37■■□□□ 1.33
MMP11-211ENST00000489582 ARHGAP5Q13017 1502 aa23.37■■□□□ 1.33
MMP11-211ENST00000489582 ZNF777Q9ULD5 760 aaPredicted RBP23.36■■□□□ 1.33
MMP11-211ENST00000489582 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
MMP11-211ENST00000489582 AKNAQ7Z591 1439 aa23.35■■□□□ 1.33
MMP11-211ENST00000489582 ADGRL1O94910 1474 aa23.3■■□□□ 1.32
MMP11-211ENST00000489582 ITSN2Q9NZM3 1697 aa23.3■■□□□ 1.32
MMP11-211ENST00000489582 MIA2Q96PC5 1412 aa23.3■■□□□ 1.32
MMP11-211ENST00000489582 RICTORQ6R327 1708 aa23.28■■□□□ 1.32
MMP11-211ENST00000489582 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
MMP11-211ENST00000489582 RAPGEF3O95398 923 aa23.28■■□□□ 1.32
MMP11-211ENST00000489582 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
MMP11-211ENST00000489582 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
MMP11-211ENST00000489582 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
MMP11-211ENST00000489582 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
MMP11-211ENST00000489582 PLEKHH2Q8IVE3 1493 aa23.24■■□□□ 1.31
MMP11-211ENST00000489582 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
MMP11-211ENST00000489582 KIAA1107Q9UPP5 1409 aa23.21■■□□□ 1.31
MMP11-211ENST00000489582 SAMD9LQ8IVG5 1584 aa23.21■■□□□ 1.31
MMP11-211ENST00000489582 ABCC1P33527 1531 aa23.2■■□□□ 1.3
MMP11-211ENST00000489582 CAMSAP2Q08AD1 1489 aa23.2■■□□□ 1.3
MMP11-211ENST00000489582 POGZQ7Z3K3 1410 aa23.2■■□□□ 1.3
MMP11-211ENST00000489582 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.3
MMP11-211ENST00000489582 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
MMP11-211ENST00000489582 RSPH4AQ5TD94 716 aa23.17■■□□□ 1.3
MMP11-211ENST00000489582 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
MMP11-211ENST00000489582 ZMYM4Q5VZL5 1548 aa23.17■■□□□ 1.3
MMP11-211ENST00000489582 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
MMP11-211ENST00000489582 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
MMP11-211ENST00000489582 SYCP2Q9BX26 1530 aa23.15■■□□□ 1.3
MMP11-211ENST00000489582 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
MMP11-211ENST00000489582 MBD5Q9P267 1494 aa23.14■■□□□ 1.29
MMP11-211ENST00000489582 TRAPPC8Q9Y2L5 1435 aa23.14■■□□□ 1.29
MMP11-211ENST00000489582 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
MMP11-211ENST00000489582 ARHGEF40Q8TER5 1519 aa23.13■■□□□ 1.29
MMP11-211ENST00000489582 ZFYVE16Q7Z3T8 1539 aa23.11■■□□□ 1.29
MMP11-211ENST00000489582 KDM5CP41229 1560 aa23.1■■□□□ 1.29
MMP11-211ENST00000489582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.1■■□□□ 1.29
MMP11-211ENST00000489582 TSPY4P0CV99 314 aa23.09■■□□□ 1.29
MMP11-211ENST00000489582 TSPY10P0CW01 314 aa23.09■■□□□ 1.29
MMP11-211ENST00000489582 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
MMP11-211ENST00000489582 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
MMP11-211ENST00000489582 HECW2Q9P2P5 1572 aa23.08■■□□□ 1.29
MMP11-211ENST00000489582 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
MMP11-211ENST00000489582 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
MMP11-211ENST00000489582 YEATS2Q9ULM3 1422 aa23.07■■□□□ 1.28
MMP11-211ENST00000489582 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
MMP11-211ENST00000489582 ABCC5O15440 1437 aa23.05■■□□□ 1.28
MMP11-211ENST00000489582 DAPK1P53355 1430 aa23.03■■□□□ 1.28
MMP11-211ENST00000489582 ITGAEP38570 1179 aa23.03■■□□□ 1.28
MMP11-211ENST00000489582 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
MMP11-211ENST00000489582 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
MMP11-211ENST00000489582 DNMT1P26358 1616 aaKnown RBP22.99■■□□□ 1.27
MMP11-211ENST00000489582 ABCA6Q8N139 1617 aa22.99■■□□□ 1.27
MMP11-211ENST00000489582 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
MMP11-211ENST00000489582 DIP2CQ9Y2E4 1556 aa22.98■■□□□ 1.27
MMP11-211ENST00000489582 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
MMP11-211ENST00000489582 ARID4BQ4LE39 1312 aaPredicted RBP22.98■■□□□ 1.27
MMP11-211ENST00000489582 C9orf84Q5VXU9 1444 aa22.98■■□□□ 1.27
MMP11-211ENST00000489582 ATP10AO60312 1499 aa22.97■■□□□ 1.27
MMP11-211ENST00000489582 SIGLEC1Q9BZZ2 1709 aa22.96■■□□□ 1.27
MMP11-211ENST00000489582 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
MMP11-211ENST00000489582 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
MMP11-211ENST00000489582 KDM4FA0A1W2PPD8 638 aa22.95■■□□□ 1.26
MMP11-211ENST00000489582 SHANK2Q9UPX8 1470 aa22.95■■□□□ 1.26
MMP11-211ENST00000489582 PTPRKQ15262 1439 aa22.93■■□□□ 1.26
MMP11-211ENST00000489582 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
MMP11-211ENST00000489582 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
MMP11-211ENST00000489582 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
MMP11-211ENST00000489582 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
MMP11-211ENST00000489582 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
MMP11-211ENST00000489582 CROCC2H7BZ55 1655 aa22.89■■□□□ 1.25
MMP11-211ENST00000489582 REREQ9P2R6 1566 aa22.89■■□□□ 1.25
MMP11-211ENST00000489582 TRIM26Q12899 539 aaPredicted RBP22.87■■□□□ 1.25
MMP11-211ENST00000489582 NCOA1Q15788 1441 aa22.87■■□□□ 1.25
MMP11-211ENST00000489582 ROCK1Q13464 1354 aa22.87■■□□□ 1.25
MMP11-211ENST00000489582 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
MMP11-211ENST00000489582 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
MMP11-211ENST00000489582 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
MMP11-211ENST00000489582 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
MMP11-211ENST00000489582 MLECQ14165 292 aa22.84■■□□□ 1.25
MMP11-211ENST00000489582 DHX29Q7Z478 1369 aaKnown RBP22.84■■□□□ 1.25
MMP11-211ENST00000489582 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
MMP11-211ENST00000489582 A2MP01023 1474 aa22.83■■□□□ 1.25
MMP11-211ENST00000489582 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
MMP11-211ENST00000489582 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
MMP11-211ENST00000489582 AGLP35573 1532 aa22.8■■□□□ 1.24
MMP11-211ENST00000489582 RIMS1Q86UR5 1692 aaKnown RBP22.8■■□□□ 1.24
MMP11-211ENST00000489582 DUOX2Q9NRD8 1548 aa22.78■■□□□ 1.24
MMP11-211ENST00000489582 KIF3BO15066 747 aa22.75■■□□□ 1.23
MMP11-211ENST00000489582 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
MMP11-211ENST00000489582 ERBINQ96RT1 1412 aa22.73■■□□□ 1.23
MMP11-211ENST00000489582 HFM1A2PYH4 1435 aa22.72■■□□□ 1.23
MMP11-211ENST00000489582 NAIPQ13075 1403 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms