RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
CSF3R-213ENST00000489551 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.27
CSF3R-213ENST00000489551 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
CSF3R-213ENST00000489551 POGZQ7Z3K3 1410 aa16.76■□□□□ 0.27
CSF3R-213ENST00000489551 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
CSF3R-213ENST00000489551 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
CSF3R-213ENST00000489551 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
CSF3R-213ENST00000489551 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
CSF3R-213ENST00000489551 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
CSF3R-213ENST00000489551 ATP10AO60312 1499 aa16.68■□□□□ 0.26
CSF3R-213ENST00000489551 HSPA2P54652 639 aa16.68■□□□□ 0.26
CSF3R-213ENST00000489551 MLECQ14165 292 aa16.68■□□□□ 0.26
CSF3R-213ENST00000489551 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
CSF3R-213ENST00000489551 ARHGEF12Q9NZN5 1544 aa16.68■□□□□ 0.26
CSF3R-213ENST00000489551 KDM5CP41229 1560 aa16.68■□□□□ 0.26
CSF3R-213ENST00000489551 EFCAB2Q5VUJ9 269 aa16.67■□□□□ 0.26
CSF3R-213ENST00000489551 FBXO41Q8TF61 875 aa16.66■□□□□ 0.26
CSF3R-213ENST00000489551 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
CSF3R-213ENST00000489551 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
CSF3R-213ENST00000489551 PREX2Q70Z35 1606 aa16.64■□□□□ 0.25
CSF3R-213ENST00000489551 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
CSF3R-213ENST00000489551 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
CSF3R-213ENST00000489551 CDC42BPAQ5VT25 1732 aa16.64■□□□□ 0.25
CSF3R-213ENST00000489551 DIP2CQ9Y2E4 1556 aa16.64■□□□□ 0.25
CSF3R-213ENST00000489551 ZNF518AQ6AHZ1 1483 aa16.63■□□□□ 0.25
CSF3R-213ENST00000489551 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
CSF3R-213ENST00000489551 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
CSF3R-213ENST00000489551 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
CSF3R-213ENST00000489551 PREX1Q8TCU6 1659 aa16.61■□□□□ 0.25
CSF3R-213ENST00000489551 CLIP1P30622 1438 aa16.61■□□□□ 0.25
CSF3R-213ENST00000489551 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
CSF3R-213ENST00000489551 TRAPPC8Q9Y2L5 1435 aa16.6■□□□□ 0.25
CSF3R-213ENST00000489551 ABCC1P33527 1531 aa16.6■□□□□ 0.25
CSF3R-213ENST00000489551 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
CSF3R-213ENST00000489551 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
CSF3R-213ENST00000489551 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
CSF3R-213ENST00000489551 SETD1BQ9UPS6 1966 aaKnown RBP16.58■□□□□ 0.24
CSF3R-213ENST00000489551 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
CSF3R-213ENST00000489551 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
CSF3R-213ENST00000489551 C3P01024 1663 aa16.56■□□□□ 0.24
CSF3R-213ENST00000489551 SAMD9LQ8IVG5 1584 aa16.53■□□□□ 0.24
CSF3R-213ENST00000489551 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
CSF3R-213ENST00000489551 AGLP35573 1532 aa16.52■□□□□ 0.24
CSF3R-213ENST00000489551 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
CSF3R-213ENST00000489551 GPATCH8Q9UKJ3 1502 aaKnown RBP16.49■□□□□ 0.23
CSF3R-213ENST00000489551 SYCP2Q9BX26 1530 aa16.48■□□□□ 0.23
CSF3R-213ENST00000489551 CERKQ8TCT0 537 aa16.47■□□□□ 0.23
CSF3R-213ENST00000489551 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
CSF3R-213ENST00000489551 UHRF1BP1Q6BDS2 1440 aa16.45■□□□□ 0.22
CSF3R-213ENST00000489551 HNRNPMP52272 730 aaKnown RBP eCLIP16.44■□□□□ 0.22
CSF3R-213ENST00000489551 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
CSF3R-213ENST00000489551 INO80Q9ULG1 1556 aaPredicted RBP16.43■□□□□ 0.22
CSF3R-213ENST00000489551 MROH2AA6NES4 1674 aa16.42■□□□□ 0.22
CSF3R-213ENST00000489551 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
CSF3R-213ENST00000489551 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
CSF3R-213ENST00000489551 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
CSF3R-213ENST00000489551 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
CSF3R-213ENST00000489551 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
CSF3R-213ENST00000489551 SPAG9O60271 1321 aaKnown RBP16.38■□□□□ 0.21
CSF3R-213ENST00000489551 CNTLNQ9NXG0 1405 aa16.36■□□□□ 0.21
CSF3R-213ENST00000489551 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
CSF3R-213ENST00000489551 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
CSF3R-213ENST00000489551 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
CSF3R-213ENST00000489551 PTPRTO14522 1441 aa16.36■□□□□ 0.21
CSF3R-213ENST00000489551 LTBP4Q8N2S1 1624 aa16.35■□□□□ 0.21
CSF3R-213ENST00000489551 ADGBQ8N7X0 1667 aa16.35■□□□□ 0.21
CSF3R-213ENST00000489551 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
CSF3R-213ENST00000489551 ZMYM3Q14202 1370 aa16.35■□□□□ 0.21
CSF3R-213ENST00000489551 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
CSF3R-213ENST00000489551 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
CSF3R-213ENST00000489551 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
CSF3R-213ENST00000489551 A2MP01023 1474 aa16.34■□□□□ 0.21
CSF3R-213ENST00000489551 PLEKHH2Q8IVE3 1493 aa16.34■□□□□ 0.21
CSF3R-213ENST00000489551 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
CSF3R-213ENST00000489551 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
CSF3R-213ENST00000489551 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
CSF3R-213ENST00000489551 NPATQ14207 1427 aa16.32■□□□□ 0.2
CSF3R-213ENST00000489551 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
CSF3R-213ENST00000489551 MYO3AQ8NEV4 1616 aa16.31■□□□□ 0.2
CSF3R-213ENST00000489551 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
CSF3R-213ENST00000489551 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
CSF3R-213ENST00000489551 GGT6Q6P531 493 aa16.27■□□□□ 0.2
CSF3R-213ENST00000489551 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
CSF3R-213ENST00000489551 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
CSF3R-213ENST00000489551 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
CSF3R-213ENST00000489551 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
CSF3R-213ENST00000489551 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
CSF3R-213ENST00000489551 CAMSAP2Q08AD1 1489 aa16.22■□□□□ 0.19
CSF3R-213ENST00000489551 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
CSF3R-213ENST00000489551 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
CSF3R-213ENST00000489551 PLA2R1Q13018 1463 aa16.21■□□□□ 0.19
CSF3R-213ENST00000489551 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
CSF3R-213ENST00000489551 IQSEC2Q5JU85 1478 aa16.2■□□□□ 0.18
CSF3R-213ENST00000489551 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
CSF3R-213ENST00000489551 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
CSF3R-213ENST00000489551 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
CSF3R-213ENST00000489551 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
CSF3R-213ENST00000489551 A2ML1A8K2U0 1454 aa16.17■□□□□ 0.18
CSF3R-213ENST00000489551 POLR1AO95602 1720 aaPredicted RBP16.17■□□□□ 0.18
CSF3R-213ENST00000489551 ILDR2Q71H61 639 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms