RNA–Protein interactions for RNA: ENST00000489387.1

AP4M1-216, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 2

Gene AP4M1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-216ENST00000489387 SIGLEC1Q9BZZ2 1709 aa23.47■■□□□ 1.35
AP4M1-216ENST00000489387 PTPRMP28827 1452 aa23.46■■□□□ 1.35
AP4M1-216ENST00000489387 CLIP1P30622 1438 aa23.46■■□□□ 1.35
AP4M1-216ENST00000489387 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
AP4M1-216ENST00000489387 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
AP4M1-216ENST00000489387 MADDQ8WXG6 1647 aa23.45■■□□□ 1.34
AP4M1-216ENST00000489387 MAGI2Q86UL8 1455 aa23.44■■□□□ 1.34
AP4M1-216ENST00000489387 EFCAB2Q5VUJ9 269 aa23.44■■□□□ 1.34
AP4M1-216ENST00000489387 ARID4BQ4LE39 1312 aaPredicted RBP23.43■■□□□ 1.34
AP4M1-216ENST00000489387 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
AP4M1-216ENST00000489387 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
AP4M1-216ENST00000489387 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
AP4M1-216ENST00000489387 PREX2Q70Z35 1606 aa23.37■■□□□ 1.33
AP4M1-216ENST00000489387 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
AP4M1-216ENST00000489387 KDM5CP41229 1560 aa23.35■■□□□ 1.33
AP4M1-216ENST00000489387 ZNF518AQ6AHZ1 1483 aa23.34■■□□□ 1.33
AP4M1-216ENST00000489387 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.33
AP4M1-216ENST00000489387 ATP10AO60312 1499 aa23.32■■□□□ 1.32
AP4M1-216ENST00000489387 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
AP4M1-216ENST00000489387 ABCC1P33527 1531 aa23.31■■□□□ 1.32
AP4M1-216ENST00000489387 ARHGEF12Q9NZN5 1544 aa23.31■■□□□ 1.32
AP4M1-216ENST00000489387 C9orf84Q5VXU9 1444 aa23.3■■□□□ 1.32
AP4M1-216ENST00000489387 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
AP4M1-216ENST00000489387 TRAPPC8Q9Y2L5 1435 aa23.27■■□□□ 1.32
AP4M1-216ENST00000489387 FER1L4A9Z1Z3 1794 aa23.26■■□□□ 1.31
AP4M1-216ENST00000489387 DIP2CQ9Y2E4 1556 aa23.26■■□□□ 1.31
AP4M1-216ENST00000489387 MLECQ14165 292 aa23.25■■□□□ 1.31
AP4M1-216ENST00000489387 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
AP4M1-216ENST00000489387 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
AP4M1-216ENST00000489387 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
AP4M1-216ENST00000489387 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
AP4M1-216ENST00000489387 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
AP4M1-216ENST00000489387 SAMD9LQ8IVG5 1584 aa23.22■■□□□ 1.31
AP4M1-216ENST00000489387 REREQ9P2R6 1566 aa23.21■■□□□ 1.31
AP4M1-216ENST00000489387 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
AP4M1-216ENST00000489387 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
AP4M1-216ENST00000489387 MTUS2Q5JR59 1369 aa23.15■■□□□ 1.3
AP4M1-216ENST00000489387 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
AP4M1-216ENST00000489387 MYT1LQ9UL68 1186 aa23.15■■□□□ 1.3
AP4M1-216ENST00000489387 ILDR1Q86SU0 546 aaPredicted RBP23.14■■□□□ 1.29
AP4M1-216ENST00000489387 ZNF777Q9ULD5 760 aaPredicted RBP23.14■■□□□ 1.29
AP4M1-216ENST00000489387 AGLP35573 1532 aa23.13■■□□□ 1.29
AP4M1-216ENST00000489387 EHBP1L1Q8N3D4 1523 aa23.13■■□□□ 1.29
AP4M1-216ENST00000489387 CCNB3Q8WWL7 1395 aa23.12■■□□□ 1.29
AP4M1-216ENST00000489387 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
AP4M1-216ENST00000489387 KIAA1107Q9UPP5 1409 aa23.11■■□□□ 1.29
AP4M1-216ENST00000489387 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.29
AP4M1-216ENST00000489387 CFDP1Q9UEE9 299 aaPredicted RBP23.1■■□□□ 1.29
AP4M1-216ENST00000489387 LOC105371045A0A1W2PR82 267 aa23.08■■□□□ 1.29
AP4M1-216ENST00000489387 HSPA2P54652 639 aa23.08■■□□□ 1.29
AP4M1-216ENST00000489387 PLEKHH2Q8IVE3 1493 aa23.07■■□□□ 1.28
AP4M1-216ENST00000489387 CEBPAP49715 358 aaPredicted RBP23.07■■□□□ 1.28
AP4M1-216ENST00000489387 INO80Q9ULG1 1556 aaPredicted RBP23.05■■□□□ 1.28
AP4M1-216ENST00000489387 ATP7AQ04656 1500 aa23.04■■□□□ 1.28
AP4M1-216ENST00000489387 SPAG9O60271 1321 aaKnown RBP23.04■■□□□ 1.28
AP4M1-216ENST00000489387 PREX1Q8TCU6 1659 aa23.03■■□□□ 1.28
AP4M1-216ENST00000489387 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
AP4M1-216ENST00000489387 C3P01024 1663 aa23.02■■□□□ 1.28
AP4M1-216ENST00000489387 MBD5Q9P267 1494 aa23.01■■□□□ 1.27
AP4M1-216ENST00000489387 SETD1BQ9UPS6 1966 aaKnown RBP23■■□□□ 1.27
AP4M1-216ENST00000489387 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
AP4M1-216ENST00000489387 PLXNC1O60486 1568 aa22.99■■□□□ 1.27
AP4M1-216ENST00000489387 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
AP4M1-216ENST00000489387 VPS8Q8N3P4 1428 aa22.99■■□□□ 1.27
AP4M1-216ENST00000489387 A2MP01023 1474 aa22.95■■□□□ 1.26
AP4M1-216ENST00000489387 CNTLNQ9NXG0 1405 aa22.94■■□□□ 1.26
AP4M1-216ENST00000489387 UHRF1BP1Q6BDS2 1440 aa22.92■■□□□ 1.26
AP4M1-216ENST00000489387 ADGBQ8N7X0 1667 aa22.92■■□□□ 1.26
AP4M1-216ENST00000489387 MROH2AA6NES4 1674 aa22.91■■□□□ 1.26
AP4M1-216ENST00000489387 CAMSAP2Q08AD1 1489 aa22.91■■□□□ 1.26
AP4M1-216ENST00000489387 LRRC9Q6ZRR7 1453 aa22.91■■□□□ 1.26
AP4M1-216ENST00000489387 ESF1Q9H501 851 aaKnown RBP22.9■■□□□ 1.26
AP4M1-216ENST00000489387 RTEL1-TNFRSF6BF6WH68 1400 aa22.9■■□□□ 1.26
AP4M1-216ENST00000489387 STRCQ7RTU9 1775 aa22.89■■□□□ 1.26
AP4M1-216ENST00000489387 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
AP4M1-216ENST00000489387 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
AP4M1-216ENST00000489387 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
AP4M1-216ENST00000489387 ZMYM3Q14202 1370 aa22.86■■□□□ 1.25
AP4M1-216ENST00000489387 FBXO41Q8TF61 875 aa22.85■■□□□ 1.25
AP4M1-216ENST00000489387 KANK4Q5T7N3 995 aaPredicted RBP22.84■■□□□ 1.25
AP4M1-216ENST00000489387 NPATQ14207 1427 aa22.83■■□□□ 1.25
AP4M1-216ENST00000489387 ARHGEF5Q12774 1597 aa22.82■■□□□ 1.24
AP4M1-216ENST00000489387 DHX29Q7Z478 1369 aaKnown RBP22.82■■□□□ 1.24
AP4M1-216ENST00000489387 GGT6Q6P531 493 aa22.81■■□□□ 1.24
AP4M1-216ENST00000489387 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
AP4M1-216ENST00000489387 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
AP4M1-216ENST00000489387 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
AP4M1-216ENST00000489387 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
AP4M1-216ENST00000489387 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
AP4M1-216ENST00000489387 MYO3AQ8NEV4 1616 aa22.73■■□□□ 1.23
AP4M1-216ENST00000489387 MIA2Q96PC5 1412 aa22.73■■□□□ 1.23
AP4M1-216ENST00000489387 MAST1Q9Y2H9 1570 aa22.72■■□□□ 1.23
AP4M1-216ENST00000489387 ZNF142P52746 1687 aaPredicted RBP22.72■■□□□ 1.23
AP4M1-216ENST00000489387 KIF3BO15066 747 aa22.72■■□□□ 1.23
AP4M1-216ENST00000489387 CERKQ8TCT0 537 aa22.72■■□□□ 1.23
AP4M1-216ENST00000489387 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
AP4M1-216ENST00000489387 PTPRTO14522 1441 aa22.72■■□□□ 1.23
AP4M1-216ENST00000489387 CAMSAP1Q5T5Y3 1602 aa22.71■■□□□ 1.23
AP4M1-216ENST00000489387 TSPY4P0CV99 314 aa22.69■■□□□ 1.22
AP4M1-216ENST00000489387 TSPY10P0CW01 314 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms