RNA–Protein interactions for RNA: ENST00000489359.1

LIPA-208, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 2

Gene LIPA, Length 461 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-208ENST00000489359 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
LIPA-208ENST00000489359 GTPBP6O43824 516 aaPredicted RBP9.26□□□□□ -0.93
LIPA-208ENST00000489359 DNAJC5Q9H3Z4 198 aa9.25□□□□□ -0.93
LIPA-208ENST00000489359 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
LIPA-208ENST00000489359 KIF3CO14782 793 aa9.24□□□□□ -0.93
LIPA-208ENST00000489359 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
LIPA-208ENST00000489359 KHSRPQ92945 711 aaKnown RBP eCLIP9.24□□□□□ -0.93
LIPA-208ENST00000489359 SNPHO15079 494 aa9.23□□□□□ -0.93
LIPA-208ENST00000489359 EMP3P54852 163 aa9.19□□□□□ -0.94
LIPA-208ENST00000489359 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
LIPA-208ENST00000489359 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
LIPA-208ENST00000489359 DOK7Q18PE1 504 aa9.17□□□□□ -0.94
LIPA-208ENST00000489359 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
LIPA-208ENST00000489359 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
LIPA-208ENST00000489359 ARSIQ5FYB1 569 aa9.16□□□□□ -0.94
LIPA-208ENST00000489359 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
LIPA-208ENST00000489359 NCKAP5LQ9HCH0 1330 aa9.15□□□□□ -0.94
LIPA-208ENST00000489359 DSG2Q14126 1118 aa9.15□□□□□ -0.94
LIPA-208ENST00000489359 HOXB1P14653 301 aaPredicted RBP9.14□□□□□ -0.95
LIPA-208ENST00000489359 GPR153Q6NV75 609 aa9.14□□□□□ -0.95
LIPA-208ENST00000489359 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
LIPA-208ENST00000489359 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
LIPA-208ENST00000489359 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
LIPA-208ENST00000489359 NUDT7P0C024 238 aa9.1□□□□□ -0.95
LIPA-208ENST00000489359 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
LIPA-208ENST00000489359 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
LIPA-208ENST00000489359 VARS2Q5ST30 1063 aaKnown RBP9.08□□□□□ -0.96
LIPA-208ENST00000489359 ERBB3P21860 1342 aa9.07□□□□□ -0.96
LIPA-208ENST00000489359 RIMBP2O15034 1052 aa9.07□□□□□ -0.96
LIPA-208ENST00000489359 FOXK1P85037 733 aa9.07□□□□□ -0.96
LIPA-208ENST00000489359 PAXIP1Q6ZW49 1069 aaPredicted RBP9.07□□□□□ -0.96
LIPA-208ENST00000489359 CFAP44Q96MT7 982 aa9.07□□□□□ -0.96
LIPA-208ENST00000489359 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
LIPA-208ENST00000489359 UPF1Q92900 1129 aaKnown RBP eCLIP9.06□□□□□ -0.96
LIPA-208ENST00000489359 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
LIPA-208ENST00000489359 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
LIPA-208ENST00000489359 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
LIPA-208ENST00000489359 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
LIPA-208ENST00000489359 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
LIPA-208ENST00000489359 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
LIPA-208ENST00000489359 LHX6Q9UPM6 363 aa9.02□□□□□ -0.97
LIPA-208ENST00000489359 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
LIPA-208ENST00000489359 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
LIPA-208ENST00000489359 SLC34A2O95436 690 aa9□□□□□ -0.97
LIPA-208ENST00000489359 KDM4FA0A1W2PPD8 638 aa8.98□□□□□ -0.97
LIPA-208ENST00000489359 PDE4AP27815 886 aa8.98□□□□□ -0.97
LIPA-208ENST00000489359 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
LIPA-208ENST00000489359 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
LIPA-208ENST00000489359 EMILIN3Q9NT22 766 aa8.98□□□□□ -0.97
LIPA-208ENST00000489359 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
LIPA-208ENST00000489359 MFSD10Q14728 455 aa8.97□□□□□ -0.97
LIPA-208ENST00000489359 POTEEQ6S8J3 1075 aa8.97□□□□□ -0.97
LIPA-208ENST00000489359 OXER1Q8TDS5 423 aa8.96□□□□□ -0.98
LIPA-208ENST00000489359 AXIN2Q9Y2T1 843 aa8.95□□□□□ -0.98
LIPA-208ENST00000489359 SPNS2Q8IVW8 549 aa8.94□□□□□ -0.98
LIPA-208ENST00000489359 ZNF687Q8N1G0 1237 aa8.92□□□□□ -0.98
LIPA-208ENST00000489359 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
LIPA-208ENST00000489359 DPYSL4O14531 572 aa8.87□□□□□ -0.99
LIPA-208ENST00000489359 EVI5O60447 810 aa8.87□□□□□ -0.99
LIPA-208ENST00000489359 PSEN2P49810 448 aa8.87□□□□□ -0.99
LIPA-208ENST00000489359 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
LIPA-208ENST00000489359 TBC1D12O60347 775 aa8.85□□□□□ -0.99
LIPA-208ENST00000489359 DMRTA1Q5VZB9 504 aa8.85□□□□□ -0.99
LIPA-208ENST00000489359 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
LIPA-208ENST00000489359 ZNF454Q8N9F8 522 aa8.85□□□□□ -0.99
LIPA-208ENST00000489359 MAP3K9P80192 1104 aa8.84□□□□□ -0.99
LIPA-208ENST00000489359 CAMK2BQ13554 666 aa8.83□□□□□ -1
LIPA-208ENST00000489359 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
LIPA-208ENST00000489359 FOSBP53539 338 aa8.8□□□□□ -1
LIPA-208ENST00000489359 PPP4R3BQ5MIZ7 849 aa8.8□□□□□ -1
LIPA-208ENST00000489359 KCNK17Q96T54 332 aa8.8□□□□□ -1
LIPA-208ENST00000489359 ADAM33Q9BZ11 813 aa8.79□□□□□ -1
LIPA-208ENST00000489359 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
LIPA-208ENST00000489359 PCDHGA10Q9Y5H3 936 aa8.77□□□□□ -1.01
LIPA-208ENST00000489359 ARHGAP33O14559 1287 aa8.76□□□□□ -1.01
LIPA-208ENST00000489359 DDX12PQ92771 950 aa8.76□□□□□ -1.01
LIPA-208ENST00000489359 PLCB2Q00722 1185 aa8.75□□□□□ -1.01
LIPA-208ENST00000489359 E2F4Q16254 413 aa8.75□□□□□ -1.01
LIPA-208ENST00000489359 JPH4Q96JJ6 628 aa8.75□□□□□ -1.01
LIPA-208ENST00000489359 PBX2P40425 430 aa8.74□□□□□ -1.01
LIPA-208ENST00000489359 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
LIPA-208ENST00000489359 PSDA5PKW4 1024 aaPredicted RBP8.73□□□□□ -1.01
LIPA-208ENST00000489359 ADGRD1Q6QNK2 874 aa8.73□□□□□ -1.01
LIPA-208ENST00000489359 RBM33Q96EV2 1170 aaKnown RBP8.73□□□□□ -1.01
LIPA-208ENST00000489359 WDR70Q9NW82 654 aa8.73□□□□□ -1.01
LIPA-208ENST00000489359 ZDHHC16Q969W1 377 aa8.72□□□□□ -1.01
LIPA-208ENST00000489359 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
LIPA-208ENST00000489359 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
LIPA-208ENST00000489359 COL9A1P20849 921 aa8.71□□□□□ -1.02
LIPA-208ENST00000489359 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
LIPA-208ENST00000489359 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
LIPA-208ENST00000489359 PDIA6Q15084 440 aa8.7□□□□□ -1.02
LIPA-208ENST00000489359 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
LIPA-208ENST00000489359 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
LIPA-208ENST00000489359 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
LIPA-208ENST00000489359 GRXCR2A6NFK2 248 aa8.67□□□□□ -1.02
LIPA-208ENST00000489359 HRO43593 1189 aa8.67□□□□□ -1.02
LIPA-208ENST00000489359 PHF14O94880 888 aa8.67□□□□□ -1.02
LIPA-208ENST00000489359 PTPREP23469 700 aa8.67□□□□□ -1.02
LIPA-208ENST00000489359 NBR1Q14596 966 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms