RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 AXIN2Q9Y2T1 843 aa12.89□□□□□ -0.35
CBWD1-216ENST00000489272 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
CBWD1-216ENST00000489272 EFCAB3Q8N7B9 438 aa12.84□□□□□ -0.35
CBWD1-216ENST00000489272 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
CBWD1-216ENST00000489272 NUDT7P0C024 238 aa12.75□□□□□ -0.37
CBWD1-216ENST00000489272 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
CBWD1-216ENST00000489272 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
CBWD1-216ENST00000489272 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
CBWD1-216ENST00000489272 HRO43593 1189 aa12.72□□□□□ -0.37
CBWD1-216ENST00000489272 TK2O00142 265 aa12.71□□□□□ -0.37
CBWD1-216ENST00000489272 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
CBWD1-216ENST00000489272 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
CBWD1-216ENST00000489272 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
CBWD1-216ENST00000489272 A0A0G2JS52 829 aa12.66□□□□□ -0.38
CBWD1-216ENST00000489272 SOX12O15370 315 aa12.66□□□□□ -0.38
CBWD1-216ENST00000489272 FKBP8Q14318 412 aa12.61□□□□□ -0.39
CBWD1-216ENST00000489272 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
CBWD1-216ENST00000489272 Q6ZNB5 142 aa12.6□□□□□ -0.39
CBWD1-216ENST00000489272 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
CBWD1-216ENST00000489272 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
CBWD1-216ENST00000489272 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
CBWD1-216ENST00000489272 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-216ENST00000489272 SLC34A2O95436 690 aa12.57□□□□□ -0.4
CBWD1-216ENST00000489272 STAC3Q96MF2 364 aa12.56□□□□□ -0.4
CBWD1-216ENST00000489272 PTPN5P54829 565 aa12.55□□□□□ -0.4
CBWD1-216ENST00000489272 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
CBWD1-216ENST00000489272 KIF3CO14782 793 aa12.54□□□□□ -0.4
CBWD1-216ENST00000489272 LCE2BO14633 110 aa12.53□□□□□ -0.4
CBWD1-216ENST00000489272 PSEN2P49810 448 aa12.53□□□□□ -0.4
CBWD1-216ENST00000489272 C2orf72A6NCS6 295 aa12.48□□□□□ -0.41
CBWD1-216ENST00000489272 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
CBWD1-216ENST00000489272 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
CBWD1-216ENST00000489272 THSD4Q6ZMP0 1018 aa12.39□□□□□ -0.43
CBWD1-216ENST00000489272 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
CBWD1-216ENST00000489272 NLRP6P59044 892 aa12.37□□□□□ -0.43
CBWD1-216ENST00000489272 VPS9D1Q9Y2B5 631 aa12.35□□□□□ -0.43
CBWD1-216ENST00000489272 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
CBWD1-216ENST00000489272 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
CBWD1-216ENST00000489272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-216ENST00000489272 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-216ENST00000489272 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
CBWD1-216ENST00000489272 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
CBWD1-216ENST00000489272 TRAF7Q6Q0C0 670 aa12.3□□□□□ -0.44
CBWD1-216ENST00000489272 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
CBWD1-216ENST00000489272 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-216ENST00000489272 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
CBWD1-216ENST00000489272 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
CBWD1-216ENST00000489272 ITGBL1O95965 494 aaPredicted RBP12.25□□□□□ -0.45
CBWD1-216ENST00000489272 PTCD2Q8WV60 388 aaKnown RBP12.25□□□□□ -0.45
CBWD1-216ENST00000489272 WNT2BQ93097 391 aa12.25□□□□□ -0.45
CBWD1-216ENST00000489272 BHMG1C9JSJ3 638 aaPredicted RBP12.24□□□□□ -0.45
CBWD1-216ENST00000489272 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
CBWD1-216ENST00000489272 SLC4A5Q9BY07 1137 aa12.24□□□□□ -0.45
CBWD1-216ENST00000489272 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
CBWD1-216ENST00000489272 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
CBWD1-216ENST00000489272 GFRA3O60609 400 aa12.16□□□□□ -0.46
CBWD1-216ENST00000489272 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
CBWD1-216ENST00000489272 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
CBWD1-216ENST00000489272 ZNF787Q6DD87 383 aa12.09□□□□□ -0.47
CBWD1-216ENST00000489272 BCL2L12Q9HB09 334 aa12.09□□□□□ -0.47
CBWD1-216ENST00000489272 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
CBWD1-216ENST00000489272 TBC1D12O60347 775 aa12.07□□□□□ -0.48
CBWD1-216ENST00000489272 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
CBWD1-216ENST00000489272 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-216ENST00000489272 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
CBWD1-216ENST00000489272 NRG2O14511 850 aaPredicted RBP12.03□□□□□ -0.48
CBWD1-216ENST00000489272 KCNC4Q03721 635 aa12.02□□□□□ -0.49
CBWD1-216ENST00000489272 PTPREP23469 700 aa12□□□□□ -0.49
CBWD1-216ENST00000489272 FOXK1P85037 733 aa12□□□□□ -0.49
CBWD1-216ENST00000489272 PLPP6Q8IY26 295 aa12□□□□□ -0.49
CBWD1-216ENST00000489272 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
CBWD1-216ENST00000489272 STK24Q9Y6E0 443 aa11.99□□□□□ -0.49
CBWD1-216ENST00000489272 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
CBWD1-216ENST00000489272 ANKK1Q8NFD2 765 aa11.96□□□□□ -0.49
CBWD1-216ENST00000489272 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
CBWD1-216ENST00000489272 BCAMP50895 628 aa11.91□□□□□ -0.5
CBWD1-216ENST00000489272 FOSBP53539 338 aa11.9□□□□□ -0.5
CBWD1-216ENST00000489272 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
CBWD1-216ENST00000489272 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
CBWD1-216ENST00000489272 DSG2Q14126 1118 aa11.86□□□□□ -0.51
CBWD1-216ENST00000489272 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
CBWD1-216ENST00000489272 PPP1R37O75864 691 aa11.85□□□□□ -0.51
CBWD1-216ENST00000489272 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
CBWD1-216ENST00000489272 WBP1LQ9NX94 342 aa11.84□□□□□ -0.51
CBWD1-216ENST00000489272 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
CBWD1-216ENST00000489272 STK25O00506 426 aa11.83□□□□□ -0.52
CBWD1-216ENST00000489272 LAPTM4BQ86VI4 370 aa11.8□□□□□ -0.52
CBWD1-216ENST00000489272 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
CBWD1-216ENST00000489272 ADAM33Q9BZ11 813 aa11.79□□□□□ -0.52
CBWD1-216ENST00000489272 LOC100996750A0A140TA64 210 aa11.78□□□□□ -0.52
CBWD1-216ENST00000489272 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
CBWD1-216ENST00000489272 KRTAP4-6Q9BYQ5 205 aa11.78□□□□□ -0.52
CBWD1-216ENST00000489272 ZDHHC16Q969W1 377 aa11.77□□□□□ -0.53
CBWD1-216ENST00000489272 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
CBWD1-216ENST00000489272 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
CBWD1-216ENST00000489272 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
CBWD1-216ENST00000489272 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
CBWD1-216ENST00000489272 PROX2Q3B8N5 592 aa11.73□□□□□ -0.53
CBWD1-216ENST00000489272 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
CBWD1-216ENST00000489272 POTECB2RU33 542 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms