RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 NBR1Q14596 966 aa11.51□□□□□ -0.57
CCL20-204ENST00000489160 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
CCL20-204ENST00000489160 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
CCL20-204ENST00000489160 POTEJP0CG39 1038 aa11.49□□□□□ -0.57
CCL20-204ENST00000489160 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.49□□□□□ -0.57
CCL20-204ENST00000489160 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
CCL20-204ENST00000489160 SCUBE2Q9NQ36 999 aa11.47□□□□□ -0.57
CCL20-204ENST00000489160 PDE4AP27815 886 aa11.46□□□□□ -0.57
CCL20-204ENST00000489160 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
CCL20-204ENST00000489160 TMC2Q8TDI7 906 aa11.42□□□□□ -0.58
CCL20-204ENST00000489160 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
CCL20-204ENST00000489160 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
CCL20-204ENST00000489160 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
CCL20-204ENST00000489160 C2orf72A6NCS6 295 aa11.38□□□□□ -0.59
CCL20-204ENST00000489160 KIF3CO14782 793 aa11.38□□□□□ -0.59
CCL20-204ENST00000489160 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
CCL20-204ENST00000489160 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
CCL20-204ENST00000489160 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
CCL20-204ENST00000489160 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
CCL20-204ENST00000489160 E2F4Q16254 413 aa11.36□□□□□ -0.59
CCL20-204ENST00000489160 MFSD10Q14728 455 aa11.35□□□□□ -0.59
CCL20-204ENST00000489160 FOXK1P85037 733 aa11.34□□□□□ -0.59
CCL20-204ENST00000489160 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
CCL20-204ENST00000489160 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
CCL20-204ENST00000489160 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
CCL20-204ENST00000489160 DSG2Q14126 1118 aa11.3□□□□□ -0.6
CCL20-204ENST00000489160 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
CCL20-204ENST00000489160 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
CCL20-204ENST00000489160 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
CCL20-204ENST00000489160 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
CCL20-204ENST00000489160 SNPHO15079 494 aa11.25□□□□□ -0.61
CCL20-204ENST00000489160 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
CCL20-204ENST00000489160 ARIH1Q9Y4X5 557 aaPredicted RBP11.22□□□□□ -0.61
CCL20-204ENST00000489160 POTEMA6NI47 508 aa11.21□□□□□ -0.61
CCL20-204ENST00000489160 SLC34A2O95436 690 aa11.2□□□□□ -0.62
CCL20-204ENST00000489160 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
CCL20-204ENST00000489160 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
CCL20-204ENST00000489160 TULP1O00294 542 aaPredicted RBP11.17□□□□□ -0.62
CCL20-204ENST00000489160 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
CCL20-204ENST00000489160 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
CCL20-204ENST00000489160 TBC1D12O60347 775 aa11.15□□□□□ -0.62
CCL20-204ENST00000489160 HOXB3P14651 431 aaPredicted RBP11.15□□□□□ -0.62
CCL20-204ENST00000489160 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
CCL20-204ENST00000489160 ZSWIM6Q9HCJ5 1215 aa11.14□□□□□ -0.63
CCL20-204ENST00000489160 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
CCL20-204ENST00000489160 SEMA3EO15041 775 aa11.13□□□□□ -0.63
CCL20-204ENST00000489160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCL20-204ENST00000489160 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
CCL20-204ENST00000489160 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
CCL20-204ENST00000489160 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
CCL20-204ENST00000489160 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CCL20-204ENST00000489160 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
CCL20-204ENST00000489160 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCL20-204ENST00000489160 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
CCL20-204ENST00000489160 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
CCL20-204ENST00000489160 DPYSL4O14531 572 aa11.07□□□□□ -0.64
CCL20-204ENST00000489160 SPDYE16A6NNV3 312 aaPredicted RBP11.06□□□□□ -0.64
CCL20-204ENST00000489160 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
CCL20-204ENST00000489160 ARSIQ5FYB1 569 aa11.05□□□□□ -0.64
CCL20-204ENST00000489160 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
CCL20-204ENST00000489160 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
CCL20-204ENST00000489160 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
CCL20-204ENST00000489160 PDIA6Q15084 440 aa11.03□□□□□ -0.64
CCL20-204ENST00000489160 ST18O60284 1047 aa11.02□□□□□ -0.65
CCL20-204ENST00000489160 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
CCL20-204ENST00000489160 EVI5O60447 810 aa11.01□□□□□ -0.65
CCL20-204ENST00000489160 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
CCL20-204ENST00000489160 NUDT7P0C024 238 aa10.99□□□□□ -0.65
CCL20-204ENST00000489160 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCL20-204ENST00000489160 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
CCL20-204ENST00000489160 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
CCL20-204ENST00000489160 PTGER2P43116 358 aa10.95□□□□□ -0.66
CCL20-204ENST00000489160 ZC3H15Q8WU90 426 aaKnown RBP10.95□□□□□ -0.66
CCL20-204ENST00000489160 PSDA5PKW4 1024 aaPredicted RBP10.93□□□□□ -0.66
CCL20-204ENST00000489160 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
CCL20-204ENST00000489160 EMP3P54852 163 aa10.91□□□□□ -0.66
CCL20-204ENST00000489160 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
CCL20-204ENST00000489160 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
CCL20-204ENST00000489160 ERBB3P21860 1342 aa10.88□□□□□ -0.67
CCL20-204ENST00000489160 PHF14O94880 888 aa10.88□□□□□ -0.67
CCL20-204ENST00000489160 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
CCL20-204ENST00000489160 EPAS1Q99814 870 aa10.88□□□□□ -0.67
CCL20-204ENST00000489160 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
CCL20-204ENST00000489160 FOSBP53539 338 aa10.87□□□□□ -0.67
CCL20-204ENST00000489160 DDX12PQ92771 950 aa10.87□□□□□ -0.67
CCL20-204ENST00000489160 JPH4Q96JJ6 628 aa10.87□□□□□ -0.67
CCL20-204ENST00000489160 ZMYND10O75800 440 aa10.86□□□□□ -0.67
CCL20-204ENST00000489160 PPP4R3BQ5MIZ7 849 aa10.85□□□□□ -0.67
CCL20-204ENST00000489160 ZNF454Q8N9F8 522 aa10.85□□□□□ -0.67
CCL20-204ENST00000489160 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
CCL20-204ENST00000489160 TYW1BQ6NUM6 668 aa10.84□□□□□ -0.67
CCL20-204ENST00000489160 FBXW7Q969H0 707 aa10.84□□□□□ -0.67
CCL20-204ENST00000489160 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
CCL20-204ENST00000489160 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
CCL20-204ENST00000489160 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
CCL20-204ENST00000489160 OSBPP22059 807 aa10.81□□□□□ -0.68
CCL20-204ENST00000489160 BARGINQ6ZT62 677 aa10.81□□□□□ -0.68
CCL20-204ENST00000489160 HS3ST6Q96QI5 342 aa10.8□□□□□ -0.68
CCL20-204ENST00000489160 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
CCL20-204ENST00000489160 SLC24A3Q9HC58 644 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms