RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
NEB-215ENST00000489048 TEX14Q8IWB6 1497 aa15.17■□□□□ 0.02
NEB-215ENST00000489048 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
NEB-215ENST00000489048 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
NEB-215ENST00000489048 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
NEB-215ENST00000489048 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
NEB-215ENST00000489048 MSH5O43196 834 aa15.15■□□□□ 0.02
NEB-215ENST00000489048 CDK11AQ9UQ88 783 aaPredicted RBP15.15■□□□□ 0.02
NEB-215ENST00000489048 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
NEB-215ENST00000489048 L3MBTL2Q969R5 705 aa15.15■□□□□ 0.02
NEB-215ENST00000489048 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
NEB-215ENST00000489048 DAPK1P53355 1430 aa15.14■□□□□ 0.01
NEB-215ENST00000489048 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
NEB-215ENST00000489048 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
NEB-215ENST00000489048 ZBED9Q6R2W3 1325 aa15.13■□□□□ 0.01
NEB-215ENST00000489048 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
NEB-215ENST00000489048 CCDC184Q52MB2 194 aa15.1■□□□□ 0.01
NEB-215ENST00000489048 ABCC5O15440 1437 aa15.1■□□□□ 0.01
NEB-215ENST00000489048 NBPF8Q3BBV2 869 aa15.08■□□□□ 0
NEB-215ENST00000489048 MBD5Q9P267 1494 aa15.07■□□□□ 0
NEB-215ENST00000489048 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
NEB-215ENST00000489048 BCL11AQ9H165 835 aa15.07■□□□□ 0
NEB-215ENST00000489048 KIF7Q2M1P5 1343 aa15.06■□□□□ 0
NEB-215ENST00000489048 KIAA0556O60303 1618 aa15.05■□□□□ 0
NEB-215ENST00000489048 MRS2Q9HD23 443 aa15.05■□□□□ -0
NEB-215ENST00000489048 PZPP20742 1482 aa15.04■□□□□ -0
NEB-215ENST00000489048 FOXD1Q16676 465 aa15.03■□□□□ -0
NEB-215ENST00000489048 DISP1Q96F81 1524 aa15.03■□□□□ -0
NEB-215ENST00000489048 NUP153P49790 1475 aaKnown RBP15.03■□□□□ -0
NEB-215ENST00000489048 ADGBQ8N7X0 1667 aa15.02■□□□□ -0
NEB-215ENST00000489048 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
NEB-215ENST00000489048 RAPGEF6Q8TEU7 1601 aa15.02□□□□□ -0.01
NEB-215ENST00000489048 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
NEB-215ENST00000489048 KIAA0586Q9BVV6 1533 aa15.01□□□□□ -0.01
NEB-215ENST00000489048 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
NEB-215ENST00000489048 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
NEB-215ENST00000489048 KIF14Q15058 1648 aa15□□□□□ -0.01
NEB-215ENST00000489048 ARID4BQ4LE39 1312 aaPredicted RBP15□□□□□ -0.01
NEB-215ENST00000489048 ITSN2Q9NZM3 1697 aa14.99□□□□□ -0.01
NEB-215ENST00000489048 RNF123Q5XPI4 1314 aa14.98□□□□□ -0.01
NEB-215ENST00000489048 CROCC2H7BZ55 1655 aa14.98□□□□□ -0.01
NEB-215ENST00000489048 ADCY10Q96PN6 1610 aa14.98□□□□□ -0.01
NEB-215ENST00000489048 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
NEB-215ENST00000489048 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
NEB-215ENST00000489048 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 KDM5CP41229 1560 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 CAMSAP2Q08AD1 1489 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 BCORL1Q5H9F3 1711 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
NEB-215ENST00000489048 TROQ12816 1431 aaPredicted RBP14.96□□□□□ -0.01
NEB-215ENST00000489048 UHRF1BP1Q6BDS2 1440 aa14.95□□□□□ -0.02
NEB-215ENST00000489048 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
NEB-215ENST00000489048 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
NEB-215ENST00000489048 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
NEB-215ENST00000489048 B4GALNT3Q6L9W6 998 aa14.94□□□□□ -0.02
NEB-215ENST00000489048 USP47Q96K76 1375 aa14.93□□□□□ -0.02
NEB-215ENST00000489048 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
NEB-215ENST00000489048 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
NEB-215ENST00000489048 RALGAPBQ86X10 1494 aa14.92□□□□□ -0.02
NEB-215ENST00000489048 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
NEB-215ENST00000489048 ARHGEF12Q9NZN5 1544 aa14.91□□□□□ -0.02
NEB-215ENST00000489048 KDM5DQ9BY66 1539 aa14.9□□□□□ -0.02
NEB-215ENST00000489048 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
NEB-215ENST00000489048 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
NEB-215ENST00000489048 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
NEB-215ENST00000489048 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
NEB-215ENST00000489048 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
NEB-215ENST00000489048 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
NEB-215ENST00000489048 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
NEB-215ENST00000489048 CFDP1Q9UEE9 299 aaPredicted RBP14.86□□□□□ -0.03
NEB-215ENST00000489048 LRPPRCP42704 1394 aaKnown RBP14.86□□□□□ -0.03
NEB-215ENST00000489048 E9PCH4 1651 aa14.85□□□□□ -0.03
NEB-215ENST00000489048 PNISRQ8TF01 805 aaKnown RBP14.85□□□□□ -0.03
NEB-215ENST00000489048 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
NEB-215ENST00000489048 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
NEB-215ENST00000489048 PKD2Q13563 968 aa14.84□□□□□ -0.03
NEB-215ENST00000489048 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
NEB-215ENST00000489048 CDC42BPAQ5VT25 1732 aa14.83□□□□□ -0.04
NEB-215ENST00000489048 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
NEB-215ENST00000489048 EIF4G3O43432 1585 aaKnown RBP14.83□□□□□ -0.04
NEB-215ENST00000489048 NOP58Q9Y2X3 529 aaKnown RBP14.82□□□□□ -0.04
NEB-215ENST00000489048 PTPRGP23470 1445 aa14.82□□□□□ -0.04
NEB-215ENST00000489048 ABCC10Q5T3U5 1492 aa14.81□□□□□ -0.04
NEB-215ENST00000489048 PLB1Q6P1J6 1458 aa14.81□□□□□ -0.04
NEB-215ENST00000489048 MAGI1Q96QZ7 1491 aaPredicted RBP14.81□□□□□ -0.04
NEB-215ENST00000489048 C9orf84Q5VXU9 1444 aa14.79□□□□□ -0.04
NEB-215ENST00000489048 CCDC136Q96JN2 1154 aa14.79□□□□□ -0.04
NEB-215ENST00000489048 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
NEB-215ENST00000489048 RALBP1Q15311 655 aa14.78□□□□□ -0.04
NEB-215ENST00000489048 ARHGEF5Q12774 1597 aa14.77□□□□□ -0.04
NEB-215ENST00000489048 ABCA8O94911 1581 aa14.77□□□□□ -0.05
NEB-215ENST00000489048 TMC1Q8TDI8 760 aa14.76□□□□□ -0.05
NEB-215ENST00000489048 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
NEB-215ENST00000489048 CARD11Q9BXL7 1154 aa14.76□□□□□ -0.05
NEB-215ENST00000489048 NUP155O75694 1391 aa14.76□□□□□ -0.05
NEB-215ENST00000489048 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
NEB-215ENST00000489048 NUP160Q12769 1436 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms