RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
COL21A1-211ENST00000488912 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
COL21A1-211ENST00000488912 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
COL21A1-211ENST00000488912 HRCP23327 699 aa16.39■□□□□ 0.21
COL21A1-211ENST00000488912 ABCA9Q8IUA7 1624 aa16.38■□□□□ 0.21
COL21A1-211ENST00000488912 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
COL21A1-211ENST00000488912 ARHGAP5Q13017 1502 aa16.38■□□□□ 0.21
COL21A1-211ENST00000488912 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
COL21A1-211ENST00000488912 DAPK1P53355 1430 aa16.37■□□□□ 0.21
COL21A1-211ENST00000488912 CROCC2H7BZ55 1655 aa16.35■□□□□ 0.21
COL21A1-211ENST00000488912 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
COL21A1-211ENST00000488912 ABCC5O15440 1437 aa16.35■□□□□ 0.21
COL21A1-211ENST00000488912 PLCH2O75038 1416 aa16.35■□□□□ 0.21
COL21A1-211ENST00000488912 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
COL21A1-211ENST00000488912 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
COL21A1-211ENST00000488912 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
COL21A1-211ENST00000488912 ARAP3Q8WWN8 1544 aa16.32■□□□□ 0.2
COL21A1-211ENST00000488912 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
COL21A1-211ENST00000488912 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
COL21A1-211ENST00000488912 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
COL21A1-211ENST00000488912 SYCP2Q9BX26 1530 aa16.3■□□□□ 0.2
COL21A1-211ENST00000488912 ARHGEF5Q12774 1597 aa16.3■□□□□ 0.2
COL21A1-211ENST00000488912 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
COL21A1-211ENST00000488912 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
COL21A1-211ENST00000488912 NAIPQ13075 1403 aa16.29■□□□□ 0.2
COL21A1-211ENST00000488912 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
COL21A1-211ENST00000488912 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL21A1-211ENST00000488912 ABCC1P33527 1531 aa16.27■□□□□ 0.19
COL21A1-211ENST00000488912 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.19
COL21A1-211ENST00000488912 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.19
COL21A1-211ENST00000488912 PLEKHH2Q8IVE3 1493 aa16.26■□□□□ 0.19
COL21A1-211ENST00000488912 SHANK2Q9UPX8 1470 aa16.26■□□□□ 0.19
COL21A1-211ENST00000488912 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
COL21A1-211ENST00000488912 CCDC141Q6ZP82 1450 aa16.26■□□□□ 0.19
COL21A1-211ENST00000488912 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
COL21A1-211ENST00000488912 FANCAO15360 1455 aa16.25■□□□□ 0.19
COL21A1-211ENST00000488912 ARHGEF12Q9NZN5 1544 aa16.25■□□□□ 0.19
COL21A1-211ENST00000488912 ADGRL2O95490 1459 aa16.24■□□□□ 0.19
COL21A1-211ENST00000488912 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
COL21A1-211ENST00000488912 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
COL21A1-211ENST00000488912 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
COL21A1-211ENST00000488912 KDM6BO15054 1643 aa16.23■□□□□ 0.19
COL21A1-211ENST00000488912 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
COL21A1-211ENST00000488912 NCOA1Q15788 1441 aa16.22■□□□□ 0.19
COL21A1-211ENST00000488912 MAP3K4Q9Y6R4 1608 aa16.22■□□□□ 0.19
COL21A1-211ENST00000488912 GLI2P10070 1586 aa16.22■□□□□ 0.19
COL21A1-211ENST00000488912 RSPH4AQ5TD94 716 aa16.2■□□□□ 0.18
COL21A1-211ENST00000488912 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 MAST1Q9Y2H9 1570 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 ANKRD30AQ9BXX3 1397 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 ADGRL1O94910 1474 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
COL21A1-211ENST00000488912 KIF13AQ9H1H9 1805 aa16.16■□□□□ 0.18
COL21A1-211ENST00000488912 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
COL21A1-211ENST00000488912 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
COL21A1-211ENST00000488912 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
COL21A1-211ENST00000488912 FAM69CQ0P6D2 419 aa16.14■□□□□ 0.18
COL21A1-211ENST00000488912 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
COL21A1-211ENST00000488912 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
COL21A1-211ENST00000488912 NEO1Q92859 1461 aa16.13■□□□□ 0.17
COL21A1-211ENST00000488912 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
COL21A1-211ENST00000488912 ZFYVE16Q7Z3T8 1539 aa16.12■□□□□ 0.17
COL21A1-211ENST00000488912 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
COL21A1-211ENST00000488912 PPRC1Q5VV67 1664 aaKnown RBP16.12■□□□□ 0.17
COL21A1-211ENST00000488912 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
COL21A1-211ENST00000488912 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
COL21A1-211ENST00000488912 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
COL21A1-211ENST00000488912 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
COL21A1-211ENST00000488912 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.17
COL21A1-211ENST00000488912 ATP7AQ04656 1500 aa16.08■□□□□ 0.17
COL21A1-211ENST00000488912 RTEL1-TNFRSF6BF6WH68 1400 aa16.08■□□□□ 0.16
COL21A1-211ENST00000488912 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.16
COL21A1-211ENST00000488912 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
COL21A1-211ENST00000488912 KDM5CP41229 1560 aa16.07■□□□□ 0.16
COL21A1-211ENST00000488912 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
COL21A1-211ENST00000488912 KIDINS220Q9ULH0 1771 aa16.06■□□□□ 0.16
COL21A1-211ENST00000488912 RICTORQ6R327 1708 aa16.05■□□□□ 0.16
COL21A1-211ENST00000488912 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
COL21A1-211ENST00000488912 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
COL21A1-211ENST00000488912 TEX14Q8IWB6 1497 aa16.04■□□□□ 0.16
COL21A1-211ENST00000488912 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
COL21A1-211ENST00000488912 ERBINQ96RT1 1412 aa16.02■□□□□ 0.16
COL21A1-211ENST00000488912 PZPP20742 1482 aa16.02■□□□□ 0.15
COL21A1-211ENST00000488912 FRMPD1Q5SYB0 1578 aa16.01■□□□□ 0.15
COL21A1-211ENST00000488912 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
COL21A1-211ENST00000488912 UNC13BO14795 1591 aa16■□□□□ 0.15
COL21A1-211ENST00000488912 RAPGEF3O95398 923 aa16■□□□□ 0.15
COL21A1-211ENST00000488912 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
COL21A1-211ENST00000488912 KDM5DQ9BY66 1539 aa16■□□□□ 0.15
COL21A1-211ENST00000488912 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
COL21A1-211ENST00000488912 ABCA6Q8N139 1617 aa15.98■□□□□ 0.15
COL21A1-211ENST00000488912 NUP155O75694 1391 aa15.97■□□□□ 0.15
COL21A1-211ENST00000488912 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
COL21A1-211ENST00000488912 MAGI2Q86UL8 1455 aa15.96■□□□□ 0.14
COL21A1-211ENST00000488912 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
COL21A1-211ENST00000488912 EIF2AK4Q9P2K8 1649 aaKnown RBP15.95■□□□□ 0.14
COL21A1-211ENST00000488912 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
COL21A1-211ENST00000488912 FOXD1Q16676 465 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms