RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ZSWIM6Q9HCJ5 1215 aa10.3□□□□□ -0.76
CCDC93-209ENST00000488908 NLRP6P59044 892 aa10.28□□□□□ -0.76
CCDC93-209ENST00000488908 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
CCDC93-209ENST00000488908 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
CCDC93-209ENST00000488908 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
CCDC93-209ENST00000488908 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
CCDC93-209ENST00000488908 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
CCDC93-209ENST00000488908 STK25O00506 426 aa10.21□□□□□ -0.77
CCDC93-209ENST00000488908 ECM2O94769 699 aaPredicted RBP10.2□□□□□ -0.78
CCDC93-209ENST00000488908 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
CCDC93-209ENST00000488908 MFRPQ9BY79 579 aa10.18□□□□□ -0.78
CCDC93-209ENST00000488908 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
CCDC93-209ENST00000488908 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
CCDC93-209ENST00000488908 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
CCDC93-209ENST00000488908 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
CCDC93-209ENST00000488908 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
CCDC93-209ENST00000488908 KIF3CO14782 793 aa10.1□□□□□ -0.79
CCDC93-209ENST00000488908 RGL2O15211 777 aa10.09□□□□□ -0.79
CCDC93-209ENST00000488908 PTGER2P43116 358 aa10.09□□□□□ -0.79
CCDC93-209ENST00000488908 PKD2Q13563 968 aa10.09□□□□□ -0.79
CCDC93-209ENST00000488908 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC93-209ENST00000488908 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
CCDC93-209ENST00000488908 ANKRD13DQ6ZTN6 518 aa10.05□□□□□ -0.8
CCDC93-209ENST00000488908 SLC34A2O95436 690 aa10.04□□□□□ -0.8
CCDC93-209ENST00000488908 NUDT7P0C024 238 aa10.04□□□□□ -0.8
CCDC93-209ENST00000488908 LSM11P83369 360 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC93-209ENST00000488908 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
CCDC93-209ENST00000488908 PBX2P40425 430 aa10□□□□□ -0.81
CCDC93-209ENST00000488908 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
CCDC93-209ENST00000488908 PPP1R37O75864 691 aa9.97□□□□□ -0.81
CCDC93-209ENST00000488908 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
CCDC93-209ENST00000488908 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
CCDC93-209ENST00000488908 POTEEQ6S8J3 1075 aa9.91□□□□□ -0.82
CCDC93-209ENST00000488908 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
CCDC93-209ENST00000488908 FOXK1P85037 733 aa9.9□□□□□ -0.82
CCDC93-209ENST00000488908 PTCD2Q8WV60 388 aaKnown RBP9.9□□□□□ -0.82
CCDC93-209ENST00000488908 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
CCDC93-209ENST00000488908 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
CCDC93-209ENST00000488908 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
CCDC93-209ENST00000488908 KDM4FA0A1W2PPD8 638 aa9.85□□□□□ -0.83
CCDC93-209ENST00000488908 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
CCDC93-209ENST00000488908 TBC1D12O60347 775 aa9.84□□□□□ -0.83
CCDC93-209ENST00000488908 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
CCDC93-209ENST00000488908 DSG2Q14126 1118 aa9.83□□□□□ -0.84
CCDC93-209ENST00000488908 PPP4R3BQ5MIZ7 849 aa9.82□□□□□ -0.84
CCDC93-209ENST00000488908 TK2O00142 265 aa9.81□□□□□ -0.84
CCDC93-209ENST00000488908 HCSTQ9UBK5 93 aa9.81□□□□□ -0.84
CCDC93-209ENST00000488908 RYDENQ9NUL5 291 aaKnown RBP9.8□□□□□ -0.84
CCDC93-209ENST00000488908 PSEN2P49810 448 aa9.78□□□□□ -0.84
CCDC93-209ENST00000488908 DNAJC5Q9H3Z4 198 aa9.78□□□□□ -0.84
CCDC93-209ENST00000488908 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
CCDC93-209ENST00000488908 KCNH8Q96L42 1107 aa9.77□□□□□ -0.85
CCDC93-209ENST00000488908 HRO43593 1189 aa9.76□□□□□ -0.85
CCDC93-209ENST00000488908 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
CCDC93-209ENST00000488908 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
CCDC93-209ENST00000488908 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
CCDC93-209ENST00000488908 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
CCDC93-209ENST00000488908 KCNK17Q96T54 332 aa9.73□□□□□ -0.85
CCDC93-209ENST00000488908 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCDC93-209ENST00000488908 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
CCDC93-209ENST00000488908 PPP1R15BQ5SWA1 713 aa9.7□□□□□ -0.86
CCDC93-209ENST00000488908 ZNF454Q8N9F8 522 aa9.69□□□□□ -0.86
CCDC93-209ENST00000488908 KCTD12Q96CX2 325 aaKnown RBP9.69□□□□□ -0.86
CCDC93-209ENST00000488908 PDE4AP27815 886 aa9.67□□□□□ -0.86
CCDC93-209ENST00000488908 VPS9D1Q9Y2B5 631 aa9.67□□□□□ -0.86
CCDC93-209ENST00000488908 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
CCDC93-209ENST00000488908 NCKAP5LQ9HCH0 1330 aa9.64□□□□□ -0.87
CCDC93-209ENST00000488908 PTPREP23469 700 aa9.63□□□□□ -0.87
CCDC93-209ENST00000488908 FOSBP53539 338 aa9.63□□□□□ -0.87
CCDC93-209ENST00000488908 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
CCDC93-209ENST00000488908 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
CCDC93-209ENST00000488908 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
CCDC93-209ENST00000488908 EVI5O60447 810 aa9.6□□□□□ -0.87
CCDC93-209ENST00000488908 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
CCDC93-209ENST00000488908 DDX27Q96GQ7 796 aaKnown RBP9.59□□□□□ -0.87
CCDC93-209ENST00000488908 LARP6Q9BRS8 491 aaKnown RBP9.59□□□□□ -0.87
CCDC93-209ENST00000488908 PTPN5P54829 565 aa9.58□□□□□ -0.88
CCDC93-209ENST00000488908 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
CCDC93-209ENST00000488908 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
CCDC93-209ENST00000488908 BHMG1C9JSJ3 638 aaPredicted RBP9.57□□□□□ -0.88
CCDC93-209ENST00000488908 ZBED2Q9BTP6 218 aa9.57□□□□□ -0.88
CCDC93-209ENST00000488908 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
CCDC93-209ENST00000488908 MRPL50Q8N5N7 158 aaKnown RBP9.55□□□□□ -0.88
CCDC93-209ENST00000488908 MFSD10Q14728 455 aa9.54□□□□□ -0.88
CCDC93-209ENST00000488908 THSD4Q6ZMP0 1018 aa9.54□□□□□ -0.88
CCDC93-209ENST00000488908 WNT2BQ93097 391 aa9.54□□□□□ -0.88
CCDC93-209ENST00000488908 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
CCDC93-209ENST00000488908 NBPF3Q9H094 633 aa9.54□□□□□ -0.88
CCDC93-209ENST00000488908 DCAF8L2P0C7V8 631 aa9.51□□□□□ -0.89
CCDC93-209ENST00000488908 IFFO2Q5TF58 517 aa9.5□□□□□ -0.89
CCDC93-209ENST00000488908 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
CCDC93-209ENST00000488908 EMILIN3Q9NT22 766 aa9.49□□□□□ -0.89
CCDC93-209ENST00000488908 RGS20O76081 388 aa9.47□□□□□ -0.89
CCDC93-209ENST00000488908 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
CCDC93-209ENST00000488908 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
CCDC93-209ENST00000488908 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.9
CCDC93-209ENST00000488908 PHF14O94880 888 aa9.45□□□□□ -0.9
CCDC93-209ENST00000488908 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
CCDC93-209ENST00000488908 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
CCDC93-209ENST00000488908 ANKK1Q8NFD2 765 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms