RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.23□□□□□ -0.77
SSR1-209ENST00000488834 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
SSR1-209ENST00000488834 FAM163AQ96GL9 167 aaPredicted RBP10.21□□□□□ -0.77
SSR1-209ENST00000488834 ST18O60284 1047 aa10.17□□□□□ -0.78
SSR1-209ENST00000488834 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
SSR1-209ENST00000488834 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
SSR1-209ENST00000488834 POTEMA6NI47 508 aa10.13□□□□□ -0.79
SSR1-209ENST00000488834 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
SSR1-209ENST00000488834 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
SSR1-209ENST00000488834 KIF3CO14782 793 aa10.09□□□□□ -0.79
SSR1-209ENST00000488834 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
SSR1-209ENST00000488834 POTEB3A0JP26 581 aa10.07□□□□□ -0.8
SSR1-209ENST00000488834 C2orf72A6NCS6 295 aa10.07□□□□□ -0.8
SSR1-209ENST00000488834 POTEBQ6S5H4 581 aa10.07□□□□□ -0.8
SSR1-209ENST00000488834 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
SSR1-209ENST00000488834 PDE4AP27815 886 aa10.04□□□□□ -0.8
SSR1-209ENST00000488834 CADPS2Q86UW7 1296 aa10.04□□□□□ -0.8
SSR1-209ENST00000488834 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
SSR1-209ENST00000488834 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
SSR1-209ENST00000488834 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.814e-7■■■■□ 23.4
SSR1-209ENST00000488834 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
SSR1-209ENST00000488834 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
SSR1-209ENST00000488834 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
SSR1-209ENST00000488834 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
SSR1-209ENST00000488834 CRISPLD2Q9H0B8 497 aa9.97□□□□□ -0.81
SSR1-209ENST00000488834 SNPHO15079 494 aa9.95□□□□□ -0.82
SSR1-209ENST00000488834 DSG2Q14126 1118 aa9.95□□□□□ -0.82
SSR1-209ENST00000488834 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
SSR1-209ENST00000488834 PPP1R15BQ5SWA1 713 aa9.94□□□□□ -0.82
SSR1-209ENST00000488834 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
SSR1-209ENST00000488834 KDM2AQ9Y2K7 1162 aa9.93□□□□□ -0.82
SSR1-209ENST00000488834 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
SSR1-209ENST00000488834 EMP3P54852 163 aa9.91□□□□□ -0.82
SSR1-209ENST00000488834 FOXK1P85037 733 aa9.91□□□□□ -0.82
SSR1-209ENST00000488834 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
SSR1-209ENST00000488834 MFSD10Q14728 455 aa9.9□□□□□ -0.82
SSR1-209ENST00000488834 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
SSR1-209ENST00000488834 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
SSR1-209ENST00000488834 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
SSR1-209ENST00000488834 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
SSR1-209ENST00000488834 E2F4Q16254 413 aa9.87□□□□□ -0.83
SSR1-209ENST00000488834 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
SSR1-209ENST00000488834 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
SSR1-209ENST00000488834 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
SSR1-209ENST00000488834 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
SSR1-209ENST00000488834 KDM4FA0A1W2PPD8 638 aa9.85□□□□□ -0.83
SSR1-209ENST00000488834 NUDT7P0C024 238 aa9.84□□□□□ -0.83
SSR1-209ENST00000488834 PCDHGA4Q9Y5G9 962 aa9.84□□□□□ -0.83
SSR1-209ENST00000488834 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
SSR1-209ENST00000488834 UPF1Q92900 1129 aaKnown RBP eCLIP9.82□□□□□ -0.84
SSR1-209ENST00000488834 SLC34A2O95436 690 aa9.81□□□□□ -0.84
SSR1-209ENST00000488834 VARS2Q5ST30 1063 aaKnown RBP9.81□□□□□ -0.84
SSR1-209ENST00000488834 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
SSR1-209ENST00000488834 TBC1D12O60347 775 aa9.8□□□□□ -0.84
SSR1-209ENST00000488834 KCNV2Q8TDN2 545 aa9.79□□□□□ -0.84
SSR1-209ENST00000488834 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
SSR1-209ENST00000488834 CAMK2BQ13554 666 aa9.78□□□□□ -0.84
SSR1-209ENST00000488834 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
SSR1-209ENST00000488834 ERBB3P21860 1342 aa9.78□□□□□ -0.84
SSR1-209ENST00000488834 POTEEQ6S8J3 1075 aa9.77□□□□□ -0.85
SSR1-209ENST00000488834 OXER1Q8TDS5 423 aa9.77□□□□□ -0.85
SSR1-209ENST00000488834 PTCD2Q8WV60 388 aaKnown RBP9.77□□□□□ -0.85
SSR1-209ENST00000488834 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
SSR1-209ENST00000488834 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
SSR1-209ENST00000488834 ZNF316A6NFI3 1004 aaPredicted RBP9.76□□□□□ -0.85
SSR1-209ENST00000488834 DPYSL4O14531 572 aa9.75□□□□□ -0.85
SSR1-209ENST00000488834 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
SSR1-209ENST00000488834 NBR1Q14596 966 aa9.73□□□□□ -0.85
SSR1-209ENST00000488834 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
SSR1-209ENST00000488834 SPNS2Q8IVW8 549 aa9.68□□□□□ -0.86
SSR1-209ENST00000488834 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
SSR1-209ENST00000488834 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
SSR1-209ENST00000488834 SPDYE16A6NNV3 312 aaPredicted RBP9.67□□□□□ -0.86
SSR1-209ENST00000488834 EVI5O60447 810 aa9.67□□□□□ -0.86
SSR1-209ENST00000488834 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
SSR1-209ENST00000488834 PDIA6Q15084 440 aa9.65□□□□□ -0.86
SSR1-209ENST00000488834 BCANQ96GW7 911 aa9.65□□□□□ -0.86
SSR1-209ENST00000488834 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
SSR1-209ENST00000488834 SEMA3EO15041 775 aa9.6□□□□□ -0.87
SSR1-209ENST00000488834 PSEN2P49810 448 aa9.6□□□□□ -0.87
SSR1-209ENST00000488834 MMRN1Q13201 1228 aa9.6□□□□□ -0.87
SSR1-209ENST00000488834 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
SSR1-209ENST00000488834 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
SSR1-209ENST00000488834 DDX12PQ92771 950 aa9.59□□□□□ -0.87
SSR1-209ENST00000488834 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
SSR1-209ENST00000488834 FOSBP53539 338 aa9.58□□□□□ -0.88
SSR1-209ENST00000488834 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
SSR1-209ENST00000488834 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
SSR1-209ENST00000488834 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
SSR1-209ENST00000488834 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
SSR1-209ENST00000488834 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSR1-209ENST00000488834 MLLT3P42568 568 aaPredicted RBP9.54□□□□□ -0.88
SSR1-209ENST00000488834 PPP4R3BQ5MIZ7 849 aa9.54□□□□□ -0.88
SSR1-209ENST00000488834 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
SSR1-209ENST00000488834 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
SSR1-209ENST00000488834 PCDHGA10Q9Y5H3 936 aa9.54□□□□□ -0.88
SSR1-209ENST00000488834 TESPA1A2RU30 521 aaPredicted RBP9.53□□□□□ -0.88
SSR1-209ENST00000488834 PTGER2P43116 358 aa9.53□□□□□ -0.88
SSR1-209ENST00000488834 ANKRD13DQ6ZTN6 518 aa9.53□□□□□ -0.88
SSR1-209ENST00000488834 PHF14O94880 888 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms