RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 PTPRMP28827 1452 aa29.87■■■□□ 2.37
ATG9A-222ENST00000488833 MADDQ8WXG6 1647 aa29.87■■■□□ 2.37
ATG9A-222ENST00000488833 POGZQ7Z3K3 1410 aa29.87■■■□□ 2.37
ATG9A-222ENST00000488833 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
ATG9A-222ENST00000488833 YEATS2Q9ULM3 1422 aa29.84■■■□□ 2.37
ATG9A-222ENST00000488833 CCDC18Q5T9S5 1454 aa29.84■■■□□ 2.37
ATG9A-222ENST00000488833 MAGI2Q86UL8 1455 aa29.83■■■□□ 2.37
ATG9A-222ENST00000488833 EFCAB2Q5VUJ9 269 aa29.83■■■□□ 2.37
ATG9A-222ENST00000488833 ARHGAP5Q13017 1502 aa29.81■■■□□ 2.36
ATG9A-222ENST00000488833 FYCO1Q9BQS8 1478 aa29.78■■■□□ 2.36
ATG9A-222ENST00000488833 RIMS1Q86UR5 1692 aaKnown RBP29.78■■■□□ 2.36
ATG9A-222ENST00000488833 SIGLEC1Q9BZZ2 1709 aa29.77■■■□□ 2.36
ATG9A-222ENST00000488833 CDC42BPBQ9Y5S2 1711 aa29.73■■■□□ 2.35
ATG9A-222ENST00000488833 ZNF518AQ6AHZ1 1483 aa29.72■■■□□ 2.35
ATG9A-222ENST00000488833 PREX2Q70Z35 1606 aa29.71■■■□□ 2.35
ATG9A-222ENST00000488833 ATP10AO60312 1499 aa29.68■■■□□ 2.34
ATG9A-222ENST00000488833 KDM5CP41229 1560 aa29.67■■■□□ 2.34
ATG9A-222ENST00000488833 C9orf84Q5VXU9 1444 aa29.66■■■□□ 2.34
ATG9A-222ENST00000488833 MLECQ14165 292 aa29.64■■■□□ 2.34
ATG9A-222ENST00000488833 FER1L4A9Z1Z3 1794 aa29.64■■■□□ 2.34
ATG9A-222ENST00000488833 CDC42BPAQ5VT25 1732 aa29.62■■■□□ 2.33
ATG9A-222ENST00000488833 ABCC1P33527 1531 aa29.62■■■□□ 2.33
ATG9A-222ENST00000488833 AFAP1Q8N556 730 aa29.62■■■□□ 2.33
ATG9A-222ENST00000488833 ITSN2Q9NZM3 1697 aa29.6■■■□□ 2.33
ATG9A-222ENST00000488833 MYT1LQ9UL68 1186 aa29.59■■■□□ 2.33
ATG9A-222ENST00000488833 PLPPR3Q6T4P5 718 aa29.58■■■□□ 2.33
ATG9A-222ENST00000488833 DIP2CQ9Y2E4 1556 aa29.57■■■□□ 2.32
ATG9A-222ENST00000488833 LMTK3Q96Q04 1460 aa29.57■■■□□ 2.32
ATG9A-222ENST00000488833 ARHGEF12Q9NZN5 1544 aa29.56■■■□□ 2.32
ATG9A-222ENST00000488833 TRAPPC8Q9Y2L5 1435 aa29.55■■■□□ 2.32
ATG9A-222ENST00000488833 ABCA6Q8N139 1617 aa29.54■■■□□ 2.32
ATG9A-222ENST00000488833 ILDR1Q86SU0 546 aaPredicted RBP29.53■■■□□ 2.32
ATG9A-222ENST00000488833 MLH3Q9UHC1 1453 aa29.53■■■□□ 2.32
ATG9A-222ENST00000488833 REREQ9P2R6 1566 aa29.5■■■□□ 2.31
ATG9A-222ENST00000488833 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
ATG9A-222ENST00000488833 GPATCH8Q9UKJ3 1502 aaKnown RBP29.49■■■□□ 2.31
ATG9A-222ENST00000488833 SAMD9LQ8IVG5 1584 aa29.48■■■□□ 2.31
ATG9A-222ENST00000488833 ZNF777Q9ULD5 760 aaPredicted RBP29.48■■■□□ 2.31
ATG9A-222ENST00000488833 MTUS2Q5JR59 1369 aa29.47■■■□□ 2.31
ATG9A-222ENST00000488833 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.31
ATG9A-222ENST00000488833 KIDINS220Q9ULH0 1771 aa29.44■■■□□ 2.3
ATG9A-222ENST00000488833 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
ATG9A-222ENST00000488833 AGLP35573 1532 aa29.4■■■□□ 2.3
ATG9A-222ENST00000488833 EHBP1L1Q8N3D4 1523 aa29.4■■■□□ 2.3
ATG9A-222ENST00000488833 HSPA2P54652 639 aa29.39■■■□□ 2.3
ATG9A-222ENST00000488833 CFDP1Q9UEE9 299 aaPredicted RBP29.38■■■□□ 2.29
ATG9A-222ENST00000488833 PLEKHH2Q8IVE3 1493 aa29.37■■■□□ 2.29
ATG9A-222ENST00000488833 PREX1Q8TCU6 1659 aa29.36■■■□□ 2.29
ATG9A-222ENST00000488833 TIAM1Q13009 1591 aa29.35■■■□□ 2.29
ATG9A-222ENST00000488833 CEBPAP49715 358 aaPredicted RBP29.35■■■□□ 2.29
ATG9A-222ENST00000488833 HNRNPMP52272 730 aaKnown RBP eCLIP29.35■■■□□ 2.29
ATG9A-222ENST00000488833 SPAG9O60271 1321 aaKnown RBP29.33■■■□□ 2.29
ATG9A-222ENST00000488833 KIAA1107Q9UPP5 1409 aa29.33■■■□□ 2.29
ATG9A-222ENST00000488833 ATP7AQ04656 1500 aa29.31■■■□□ 2.28
ATG9A-222ENST00000488833 INO80Q9ULG1 1556 aaPredicted RBP29.3■■■□□ 2.28
ATG9A-222ENST00000488833 ESF1Q9H501 851 aaKnown RBP29.28■■■□□ 2.28
ATG9A-222ENST00000488833 C3P01024 1663 aa29.28■■■□□ 2.28
ATG9A-222ENST00000488833 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
ATG9A-222ENST00000488833 UHRF1BP1Q6BDS2 1440 aa29.23■■■□□ 2.27
ATG9A-222ENST00000488833 SETD1BQ9UPS6 1966 aaKnown RBP29.22■■■□□ 2.27
ATG9A-222ENST00000488833 ZNF644Q9H582 1327 aaPredicted RBP29.21■■■□□ 2.27
ATG9A-222ENST00000488833 CNTLNQ9NXG0 1405 aa29.21■■■□□ 2.27
ATG9A-222ENST00000488833 PLXNC1O60486 1568 aa29.21■■■□□ 2.27
ATG9A-222ENST00000488833 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.26
ATG9A-222ENST00000488833 A2MP01023 1474 aa29.19■■■□□ 2.26
ATG9A-222ENST00000488833 NCOA2Q15596 1464 aa29.19■■■□□ 2.26
ATG9A-222ENST00000488833 VPS8Q8N3P4 1428 aa29.18■■■□□ 2.26
ATG9A-222ENST00000488833 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
ATG9A-222ENST00000488833 MBD5Q9P267 1494 aa29.17■■■□□ 2.26
ATG9A-222ENST00000488833 MROH2AA6NES4 1674 aa29.15■■■□□ 2.26
ATG9A-222ENST00000488833 ADGBQ8N7X0 1667 aa29.15■■■□□ 2.26
ATG9A-222ENST00000488833 CAMSAP2Q08AD1 1489 aa29.12■■■□□ 2.25
ATG9A-222ENST00000488833 CLTCQ00610 1675 aaKnown RBP29.1■■■□□ 2.25
ATG9A-222ENST00000488833 STRCQ7RTU9 1775 aa29.09■■■□□ 2.25
ATG9A-222ENST00000488833 RTEL1-TNFRSF6BF6WH68 1400 aa29.08■■■□□ 2.25
ATG9A-222ENST00000488833 CCDC141Q6ZP82 1450 aa29.08■■■□□ 2.25
ATG9A-222ENST00000488833 LRRC9Q6ZRR7 1453 aa29.07■■■□□ 2.24
ATG9A-222ENST00000488833 NPATQ14207 1427 aa29.05■■■□□ 2.24
ATG9A-222ENST00000488833 ZMYM3Q14202 1370 aa29.05■■■□□ 2.24
ATG9A-222ENST00000488833 GGT6Q6P531 493 aa29.04■■■□□ 2.24
ATG9A-222ENST00000488833 DMRT2Q9Y5R5 561 aa29■■■□□ 2.23
ATG9A-222ENST00000488833 ARHGEF5Q12774 1597 aa28.99■■■□□ 2.23
ATG9A-222ENST00000488833 DHX29Q7Z478 1369 aaKnown RBP28.99■■■□□ 2.23
ATG9A-222ENST00000488833 MAP3K1Q13233 1512 aa28.99■■■□□ 2.23
ATG9A-222ENST00000488833 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
ATG9A-222ENST00000488833 CERKQ8TCT0 537 aa28.96■■■□□ 2.23
ATG9A-222ENST00000488833 PPP6R1Q9UPN7 881 aa28.95■■■□□ 2.22
ATG9A-222ENST00000488833 PTPRKQ15262 1439 aa28.94■■■□□ 2.22
ATG9A-222ENST00000488833 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
ATG9A-222ENST00000488833 NCOA1Q15788 1441 aa28.94■■■□□ 2.22
ATG9A-222ENST00000488833 KANK4Q5T7N3 995 aaPredicted RBP28.93■■■□□ 2.22
ATG9A-222ENST00000488833 PTPRTO14522 1441 aa28.92■■■□□ 2.22
ATG9A-222ENST00000488833 ZNF142P52746 1687 aaPredicted RBP28.92■■■□□ 2.22
ATG9A-222ENST00000488833 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
ATG9A-222ENST00000488833 KIF3BO15066 747 aa28.9■■■□□ 2.22
ATG9A-222ENST00000488833 MYOM3Q5VTT5 1437 aa28.88■■■□□ 2.21
ATG9A-222ENST00000488833 TSPY4P0CV99 314 aa28.88■■■□□ 2.21
ATG9A-222ENST00000488833 TSPY10P0CW01 314 aa28.88■■■□□ 2.21
ATG9A-222ENST00000488833 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
ATG9A-222ENST00000488833 KDM5DQ9BY66 1539 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms