RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FRMPD1Q5SYB0 1578 aa19.35■□□□□ 0.69
NELFE-209ENST00000488426 PLCH2O75038 1416 aa19.34■□□□□ 0.69
NELFE-209ENST00000488426 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
NELFE-209ENST00000488426 EHBP1L1Q8N3D4 1523 aa19.34■□□□□ 0.69
NELFE-209ENST00000488426 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
NELFE-209ENST00000488426 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
NELFE-209ENST00000488426 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
NELFE-209ENST00000488426 SCAPERQ9BY12 1400 aa19.27■□□□□ 0.68
NELFE-209ENST00000488426 RICTORQ6R327 1708 aa19.27■□□□□ 0.68
NELFE-209ENST00000488426 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
NELFE-209ENST00000488426 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
NELFE-209ENST00000488426 YEATS2Q9ULM3 1422 aa19.24■□□□□ 0.67
NELFE-209ENST00000488426 MYO5CQ9NQX4 1742 aa19.23■□□□□ 0.67
NELFE-209ENST00000488426 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
NELFE-209ENST00000488426 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
NELFE-209ENST00000488426 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
NELFE-209ENST00000488426 HRCP23327 699 aa19.22■□□□□ 0.67
NELFE-209ENST00000488426 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
NELFE-209ENST00000488426 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
NELFE-209ENST00000488426 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
NELFE-209ENST00000488426 POGZQ7Z3K3 1410 aa19.19■□□□□ 0.66
NELFE-209ENST00000488426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.662e-7■■■■□ 20.6
NELFE-209ENST00000488426 SIGLEC1Q9BZZ2 1709 aa19.17■□□□□ 0.66
NELFE-209ENST00000488426 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
NELFE-209ENST00000488426 ZMYM4Q5VZL5 1548 aa19.17■□□□□ 0.66
NELFE-209ENST00000488426 ARHGEF12Q9NZN5 1544 aa19.17■□□□□ 0.66
NELFE-209ENST00000488426 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
NELFE-209ENST00000488426 ARHGEF40Q8TER5 1519 aa19.15■□□□□ 0.66
NELFE-209ENST00000488426 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
NELFE-209ENST00000488426 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.65
NELFE-209ENST00000488426 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.65
NELFE-209ENST00000488426 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.65
NELFE-209ENST00000488426 TRAPPC8Q9Y2L5 1435 aa19.13■□□□□ 0.65
NELFE-209ENST00000488426 ADAMTSL3P82987 1691 aa19.13■□□□□ 0.65
NELFE-209ENST00000488426 PREX2Q70Z35 1606 aa19.13■□□□□ 0.65
NELFE-209ENST00000488426 MLECQ14165 292 aa19.12■□□□□ 0.65
NELFE-209ENST00000488426 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
NELFE-209ENST00000488426 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
NELFE-209ENST00000488426 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.65
NELFE-209ENST00000488426 PTPRMP28827 1452 aa19.09■□□□□ 0.65
NELFE-209ENST00000488426 ZNF518AQ6AHZ1 1483 aa19.09■□□□□ 0.65
NELFE-209ENST00000488426 MADDQ8WXG6 1647 aa19.08■□□□□ 0.64
NELFE-209ENST00000488426 ABCC1P33527 1531 aa19.07■□□□□ 0.64
NELFE-209ENST00000488426 MIA2Q96PC5 1412 aa19.07■□□□□ 0.64
NELFE-209ENST00000488426 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
NELFE-209ENST00000488426 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
NELFE-209ENST00000488426 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
NELFE-209ENST00000488426 ATP10AO60312 1499 aa19.07■□□□□ 0.64
NELFE-209ENST00000488426 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
NELFE-209ENST00000488426 KDM5CP41229 1560 aa19.06■□□□□ 0.64
NELFE-209ENST00000488426 FAM50AQ14320 339 aaKnown RBP19.06■□□□□ 0.64
NELFE-209ENST00000488426 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
NELFE-209ENST00000488426 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
NELFE-209ENST00000488426 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
NELFE-209ENST00000488426 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
NELFE-209ENST00000488426 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
NELFE-209ENST00000488426 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.64
NELFE-209ENST00000488426 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.63
NELFE-209ENST00000488426 C9orf84Q5VXU9 1444 aa19.01■□□□□ 0.63
NELFE-209ENST00000488426 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
NELFE-209ENST00000488426 DIP2CQ9Y2E4 1556 aa19■□□□□ 0.63
NELFE-209ENST00000488426 RIMS1Q86UR5 1692 aaKnown RBP19■□□□□ 0.63
NELFE-209ENST00000488426 CCER1Q8TC90 406 aaPredicted RBP19■□□□□ 0.63
NELFE-209ENST00000488426 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
NELFE-209ENST00000488426 ITGAEP38570 1179 aa18.99■□□□□ 0.63
NELFE-209ENST00000488426 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
NELFE-209ENST00000488426 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
NELFE-209ENST00000488426 KIAA1107Q9UPP5 1409 aa18.95■□□□□ 0.62
NELFE-209ENST00000488426 SPAG9O60271 1321 aaKnown RBP18.95■□□□□ 0.62
NELFE-209ENST00000488426 MBD5Q9P267 1494 aa18.93■□□□□ 0.62
NELFE-209ENST00000488426 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
NELFE-209ENST00000488426 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
NELFE-209ENST00000488426 DNMT1P26358 1616 aaKnown RBP18.9■□□□□ 0.62
NELFE-209ENST00000488426 PLEKHH2Q8IVE3 1493 aa18.89■□□□□ 0.61
NELFE-209ENST00000488426 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
NELFE-209ENST00000488426 HSPA2P54652 639 aa18.89■□□□□ 0.61
NELFE-209ENST00000488426 REREQ9P2R6 1566 aa18.89■□□□□ 0.61
NELFE-209ENST00000488426 RAB3GAP2Q9H2M9 1393 aa18.88■□□□□ 0.61
NELFE-209ENST00000488426 CAMSAP2Q08AD1 1489 aa18.88■□□□□ 0.61
NELFE-209ENST00000488426 LMTK3Q96Q04 1460 aa18.87■□□□□ 0.61
NELFE-209ENST00000488426 ATP7AQ04656 1500 aa18.87■□□□□ 0.61
NELFE-209ENST00000488426 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
NELFE-209ENST00000488426 AGLP35573 1532 aa18.86■□□□□ 0.61
NELFE-209ENST00000488426 INO80Q9ULG1 1556 aaPredicted RBP18.85■□□□□ 0.61
NELFE-209ENST00000488426 DAPK1P53355 1430 aa18.84■□□□□ 0.61
NELFE-209ENST00000488426 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
NELFE-209ENST00000488426 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
NELFE-209ENST00000488426 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
NELFE-209ENST00000488426 A2MP01023 1474 aa18.82■□□□□ 0.6
NELFE-209ENST00000488426 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
NELFE-209ENST00000488426 ABCC5O15440 1437 aa18.81■□□□□ 0.6
NELFE-209ENST00000488426 NAIPQ13075 1403 aa18.81■□□□□ 0.6
NELFE-209ENST00000488426 GGT6Q6P531 493 aa18.8■□□□□ 0.6
NELFE-209ENST00000488426 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
NELFE-209ENST00000488426 PLXNC1O60486 1568 aa18.78■□□□□ 0.6
NELFE-209ENST00000488426 CCDC141Q6ZP82 1450 aa18.78■□□□□ 0.6
NELFE-209ENST00000488426 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
NELFE-209ENST00000488426 ARHGEF5Q12774 1597 aa18.77■□□□□ 0.6
NELFE-209ENST00000488426 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
NELFE-209ENST00000488426 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms