RNA–Protein interactions for RNA: ENST00000488262.1

LINC02053-202, Transcript of long intergenic non-protein coding RNA 2053, humanhuman

TSL 1 (best) BASIC

Gene LINC02053, Length 940 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02053-202ENST00000488262 KRTAP3-2Q9BYR7 98 aa12.75□□□□□ -0.37
LINC02053-202ENST00000488262 NLRP6P59044 892 aa12.73□□□□□ -0.37
LINC02053-202ENST00000488262 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
LINC02053-202ENST00000488262 STK25O00506 426 aa12.71□□□□□ -0.37
LINC02053-202ENST00000488262 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
LINC02053-202ENST00000488262 PKD2Q13563 968 aa12.69□□□□□ -0.38
LINC02053-202ENST00000488262 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
LINC02053-202ENST00000488262 ERBB3P21860 1342 aa12.67□□□□□ -0.38
LINC02053-202ENST00000488262 RGL2O15211 777 aa12.67□□□□□ -0.38
LINC02053-202ENST00000488262 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
LINC02053-202ENST00000488262 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
LINC02053-202ENST00000488262 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
LINC02053-202ENST00000488262 ARSIQ5FYB1 569 aa12.55□□□□□ -0.4
LINC02053-202ENST00000488262 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
LINC02053-202ENST00000488262 KIF3CO14782 793 aa12.53□□□□□ -0.4
LINC02053-202ENST00000488262 KHSRPQ92945 711 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC02053-202ENST00000488262 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
LINC02053-202ENST00000488262 PPP1R37O75864 691 aa12.46□□□□□ -0.41
LINC02053-202ENST00000488262 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
LINC02053-202ENST00000488262 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
LINC02053-202ENST00000488262 NUDT7P0C024 238 aa12.41□□□□□ -0.42
LINC02053-202ENST00000488262 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
LINC02053-202ENST00000488262 RNF166Q96A37 237 aaPredicted RBP12.39□□□□□ -0.43
LINC02053-202ENST00000488262 SLC34A2O95436 690 aa12.38□□□□□ -0.43
LINC02053-202ENST00000488262 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
LINC02053-202ENST00000488262 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
LINC02053-202ENST00000488262 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
LINC02053-202ENST00000488262 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
LINC02053-202ENST00000488262 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
LINC02053-202ENST00000488262 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC02053-202ENST00000488262 PTGER2P43116 358 aa12.29□□□□□ -0.44
LINC02053-202ENST00000488262 PBX2P40425 430 aa12.27□□□□□ -0.45
LINC02053-202ENST00000488262 FOXK1P85037 733 aa12.26□□□□□ -0.45
LINC02053-202ENST00000488262 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
LINC02053-202ENST00000488262 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
LINC02053-202ENST00000488262 GPHNQ9NQX3 736 aaPredicted RBP12.25□□□□□ -0.45
LINC02053-202ENST00000488262 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
LINC02053-202ENST00000488262 PLPP6Q8IY26 295 aa12.24□□□□□ -0.45
LINC02053-202ENST00000488262 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
LINC02053-202ENST00000488262 DSG2Q14126 1118 aa12.23□□□□□ -0.45
LINC02053-202ENST00000488262 KDM4FA0A1W2PPD8 638 aa12.22□□□□□ -0.45
LINC02053-202ENST00000488262 DNAJC5Q9H3Z4 198 aa12.21□□□□□ -0.45
LINC02053-202ENST00000488262 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
LINC02053-202ENST00000488262 ARHGAP33O14559 1287 aa12.15□□□□□ -0.46
LINC02053-202ENST00000488262 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
LINC02053-202ENST00000488262 TBC1D12O60347 775 aa12.12□□□□□ -0.47
LINC02053-202ENST00000488262 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
LINC02053-202ENST00000488262 CRISPLD2Q9H0B8 497 aa12.11□□□□□ -0.47
LINC02053-202ENST00000488262 PSEN2P49810 448 aa12.1□□□□□ -0.47
LINC02053-202ENST00000488262 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
LINC02053-202ENST00000488262 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
LINC02053-202ENST00000488262 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC02053-202ENST00000488262 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
LINC02053-202ENST00000488262 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
LINC02053-202ENST00000488262 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
LINC02053-202ENST00000488262 TK2O00142 265 aa12.04□□□□□ -0.48
LINC02053-202ENST00000488262 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
LINC02053-202ENST00000488262 HRO43593 1189 aa12.02□□□□□ -0.49
LINC02053-202ENST00000488262 KCNK17Q96T54 332 aa12.02□□□□□ -0.49
LINC02053-202ENST00000488262 PDE4AP27815 886 aa12□□□□□ -0.49
LINC02053-202ENST00000488262 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
LINC02053-202ENST00000488262 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
LINC02053-202ENST00000488262 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
LINC02053-202ENST00000488262 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
LINC02053-202ENST00000488262 KCNH8Q96L42 1107 aa11.98□□□□□ -0.49
LINC02053-202ENST00000488262 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
LINC02053-202ENST00000488262 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
LINC02053-202ENST00000488262 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
LINC02053-202ENST00000488262 FOSBP53539 338 aa11.93□□□□□ -0.5
LINC02053-202ENST00000488262 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
LINC02053-202ENST00000488262 PLA2G2EQ9NZK7 142 aa11.93□□□□□ -0.5
LINC02053-202ENST00000488262 KCTD12Q96CX2 325 aaKnown RBP11.92□□□□□ -0.5
LINC02053-202ENST00000488262 VPS9D1Q9Y2B5 631 aa11.92□□□□□ -0.5
LINC02053-202ENST00000488262 EVI5O60447 810 aa11.91□□□□□ -0.5
LINC02053-202ENST00000488262 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
LINC02053-202ENST00000488262 MFSD10Q14728 455 aa11.9□□□□□ -0.5
LINC02053-202ENST00000488262 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
LINC02053-202ENST00000488262 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
LINC02053-202ENST00000488262 PTPREP23469 700 aa11.87□□□□□ -0.51
LINC02053-202ENST00000488262 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
LINC02053-202ENST00000488262 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
LINC02053-202ENST00000488262 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
LINC02053-202ENST00000488262 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
LINC02053-202ENST00000488262 SLC4A5Q9BY07 1137 aa11.85□□□□□ -0.51
LINC02053-202ENST00000488262 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
LINC02053-202ENST00000488262 ZBED2Q9BTP6 218 aa11.83□□□□□ -0.52
LINC02053-202ENST00000488262 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
LINC02053-202ENST00000488262 PTPN5P54829 565 aa11.79□□□□□ -0.52
LINC02053-202ENST00000488262 PCDHGA10Q9Y5H3 936 aa11.77□□□□□ -0.53
LINC02053-202ENST00000488262 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
LINC02053-202ENST00000488262 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
LINC02053-202ENST00000488262 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
LINC02053-202ENST00000488262 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
LINC02053-202ENST00000488262 WNT2BQ93097 391 aa11.73□□□□□ -0.53
LINC02053-202ENST00000488262 NBPF3Q9H094 633 aa11.73□□□□□ -0.53
LINC02053-202ENST00000488262 CAMK2BQ13554 666 aa11.71□□□□□ -0.53
LINC02053-202ENST00000488262 PHF14O94880 888 aa11.7□□□□□ -0.54
LINC02053-202ENST00000488262 COL9A1P20849 921 aa11.7□□□□□ -0.54
LINC02053-202ENST00000488262 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
LINC02053-202ENST00000488262 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms