RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
VPS8-224ENST00000488255 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
VPS8-224ENST00000488255 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
VPS8-224ENST00000488255 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
VPS8-224ENST00000488255 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
VPS8-224ENST00000488255 KIF3CO14782 793 aa12.57□□□□□ -0.4
VPS8-224ENST00000488255 PDE4AP27815 886 aa12.57□□□□□ -0.4
VPS8-224ENST00000488255 LARP6Q9BRS8 491 aaKnown RBP12.57□□□□□ -0.4
VPS8-224ENST00000488255 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
VPS8-224ENST00000488255 FAM163AQ96GL9 167 aaPredicted RBP12.56□□□□□ -0.4
VPS8-224ENST00000488255 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
VPS8-224ENST00000488255 CRISPLD2Q9H0B8 497 aa12.55□□□□□ -0.4
VPS8-224ENST00000488255 DSG2Q14126 1118 aa12.54□□□□□ -0.4
VPS8-224ENST00000488255 SNPHO15079 494 aa12.52□□□□□ -0.41
VPS8-224ENST00000488255 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
VPS8-224ENST00000488255 FOXK1P85037 733 aa12.49□□□□□ -0.41
VPS8-224ENST00000488255 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
VPS8-224ENST00000488255 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
VPS8-224ENST00000488255 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
VPS8-224ENST00000488255 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
VPS8-224ENST00000488255 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
VPS8-224ENST00000488255 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
VPS8-224ENST00000488255 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
VPS8-224ENST00000488255 ST18O60284 1047 aa12.43□□□□□ -0.42
VPS8-224ENST00000488255 MFSD10Q14728 455 aa12.42□□□□□ -0.42
VPS8-224ENST00000488255 UPF1Q92900 1129 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPS8-224ENST00000488255 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
VPS8-224ENST00000488255 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS8-224ENST00000488255 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
VPS8-224ENST00000488255 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
VPS8-224ENST00000488255 PCDHGA4Q9Y5G9 962 aa12.34□□□□□ -0.43
VPS8-224ENST00000488255 SLC34A2O95436 690 aa12.33□□□□□ -0.44
VPS8-224ENST00000488255 GPR153Q6NV75 609 aa12.33□□□□□ -0.44
VPS8-224ENST00000488255 EMILIN3Q9NT22 766 aa12.32□□□□□ -0.44
VPS8-224ENST00000488255 NUDT7P0C024 238 aa12.31□□□□□ -0.44
VPS8-224ENST00000488255 E2F4Q16254 413 aa12.31□□□□□ -0.44
VPS8-224ENST00000488255 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
VPS8-224ENST00000488255 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
VPS8-224ENST00000488255 TBC1D12O60347 775 aa12.3□□□□□ -0.44
VPS8-224ENST00000488255 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
VPS8-224ENST00000488255 EMP3P54852 163 aa12.3□□□□□ -0.44
VPS8-224ENST00000488255 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
VPS8-224ENST00000488255 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
VPS8-224ENST00000488255 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
VPS8-224ENST00000488255 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
VPS8-224ENST00000488255 DPYSL4O14531 572 aa12.26□□□□□ -0.45
VPS8-224ENST00000488255 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
VPS8-224ENST00000488255 FAM205CA6NFA0 338 aa12.25□□□□□ -0.45
VPS8-224ENST00000488255 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
VPS8-224ENST00000488255 POTEMA6NI47 508 aa12.24□□□□□ -0.45
VPS8-224ENST00000488255 ERBB3P21860 1342 aa12.23□□□□□ -0.45
VPS8-224ENST00000488255 EVI5O60447 810 aa12.21□□□□□ -0.45
VPS8-224ENST00000488255 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
VPS8-224ENST00000488255 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
VPS8-224ENST00000488255 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
VPS8-224ENST00000488255 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
VPS8-224ENST00000488255 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
VPS8-224ENST00000488255 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
VPS8-224ENST00000488255 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
VPS8-224ENST00000488255 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
VPS8-224ENST00000488255 P3H3Q8IVL6 736 aa12.14□□□□□ -0.47
VPS8-224ENST00000488255 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
VPS8-224ENST00000488255 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
VPS8-224ENST00000488255 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
VPS8-224ENST00000488255 DDX12PQ92771 950 aa12.09□□□□□ -0.47
VPS8-224ENST00000488255 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
VPS8-224ENST00000488255 SPDYE16A6NNV3 312 aaPredicted RBP12.08□□□□□ -0.48
VPS8-224ENST00000488255 PDIA6Q15084 440 aa12.08□□□□□ -0.48
VPS8-224ENST00000488255 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
VPS8-224ENST00000488255 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
VPS8-224ENST00000488255 GRXCR2A6NFK2 248 aa12.05□□□□□ -0.48
VPS8-224ENST00000488255 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
VPS8-224ENST00000488255 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
VPS8-224ENST00000488255 FOSBP53539 338 aa12.03□□□□□ -0.48
VPS8-224ENST00000488255 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
VPS8-224ENST00000488255 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
VPS8-224ENST00000488255 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
VPS8-224ENST00000488255 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
VPS8-224ENST00000488255 SEMA3EO15041 775 aa12□□□□□ -0.49
VPS8-224ENST00000488255 NBR1Q14596 966 aa11.99□□□□□ -0.49
VPS8-224ENST00000488255 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
VPS8-224ENST00000488255 PHF14O94880 888 aa11.98□□□□□ -0.49
VPS8-224ENST00000488255 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
VPS8-224ENST00000488255 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
VPS8-224ENST00000488255 PTGER2P43116 358 aa11.97□□□□□ -0.49
VPS8-224ENST00000488255 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
VPS8-224ENST00000488255 ADAM33Q9BZ11 813 aa11.97□□□□□ -0.49
VPS8-224ENST00000488255 PSEN2P49810 448 aa11.95□□□□□ -0.5
VPS8-224ENST00000488255 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
VPS8-224ENST00000488255 EPAS1Q99814 870 aa11.95□□□□□ -0.5
VPS8-224ENST00000488255 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
VPS8-224ENST00000488255 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
VPS8-224ENST00000488255 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
VPS8-224ENST00000488255 MAP3K7O43318 606 aa11.92□□□□□ -0.5
VPS8-224ENST00000488255 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
VPS8-224ENST00000488255 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
VPS8-224ENST00000488255 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
VPS8-224ENST00000488255 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
VPS8-224ENST00000488255 PTPREP23469 700 aa11.9□□□□□ -0.5
VPS8-224ENST00000488255 PBX2P40425 430 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms