RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 POGZQ7Z3K3 1410 aa31.41■■■□□ 2.62
CD55-209ENST00000488171 EFCAB2Q5VUJ9 269 aa31.41■■■□□ 2.62
CD55-209ENST00000488171 ZFYVE16Q7Z3T8 1539 aa31.39■■■□□ 2.62
CD55-209ENST00000488171 YEATS2Q9ULM3 1422 aa31.39■■■□□ 2.61
CD55-209ENST00000488171 HECW2Q9P2P5 1572 aa31.38■■■□□ 2.61
CD55-209ENST00000488171 MAGI2Q86UL8 1455 aa31.38■■■□□ 2.61
CD55-209ENST00000488171 ARID4BQ4LE39 1312 aaPredicted RBP31.36■■■□□ 2.61
CD55-209ENST00000488171 ARHGAP5Q13017 1502 aa31.36■■■□□ 2.61
CD55-209ENST00000488171 PTPRMP28827 1452 aa31.34■■■□□ 2.61
CD55-209ENST00000488171 CDC42BPBQ9Y5S2 1711 aa31.34■■■□□ 2.61
CD55-209ENST00000488171 SIGLEC1Q9BZZ2 1709 aa31.33■■■□□ 2.61
CD55-209ENST00000488171 MADDQ8WXG6 1647 aa31.32■■■□□ 2.6
CD55-209ENST00000488171 PREX2Q70Z35 1606 aa31.3■■■□□ 2.6
CD55-209ENST00000488171 ZNF518AQ6AHZ1 1483 aa31.26■■■□□ 2.59
CD55-209ENST00000488171 KDM5CP41229 1560 aa31.24■■■□□ 2.59
CD55-209ENST00000488171 CDC42BPAQ5VT25 1732 aa31.23■■■□□ 2.59
CD55-209ENST00000488171 AFAP1Q8N556 730 aa31.21■■■□□ 2.59
CD55-209ENST00000488171 RIMS1Q86UR5 1692 aaKnown RBP31.2■■■□□ 2.59
CD55-209ENST00000488171 ATP10AO60312 1499 aa31.2■■■□□ 2.59
CD55-209ENST00000488171 ABCC1P33527 1531 aa31.2■■■□□ 2.58
CD55-209ENST00000488171 CEP162Q5TB80 1403 aa31.2■■■□□ 2.58
CD55-209ENST00000488171 ARHGEF12Q9NZN5 1544 aa31.18■■■□□ 2.58
CD55-209ENST00000488171 C9orf84Q5VXU9 1444 aa31.18■■■□□ 2.58
CD55-209ENST00000488171 ITSN2Q9NZM3 1697 aa31.15■■■□□ 2.58
CD55-209ENST00000488171 TRAPPC8Q9Y2L5 1435 aa31.14■■■□□ 2.58
CD55-209ENST00000488171 GPATCH8Q9UKJ3 1502 aaKnown RBP31.12■■■□□ 2.57
CD55-209ENST00000488171 MLECQ14165 292 aa31.11■■■□□ 2.57
CD55-209ENST00000488171 MLH3Q9UHC1 1453 aa31.1■■■□□ 2.57
CD55-209ENST00000488171 DIP2CQ9Y2E4 1556 aa31.1■■■□□ 2.57
CD55-209ENST00000488171 FER1L4A9Z1Z3 1794 aa31.09■■■□□ 2.57
CD55-209ENST00000488171 SAMD9LQ8IVG5 1584 aa31.08■■■□□ 2.57
CD55-209ENST00000488171 ABCA6Q8N139 1617 aa31.07■■■□□ 2.56
CD55-209ENST00000488171 MTUS2Q5JR59 1369 aa31.07■■■□□ 2.56
CD55-209ENST00000488171 REREQ9P2R6 1566 aa31.05■■■□□ 2.56
CD55-209ENST00000488171 MYT1LQ9UL68 1186 aa31.05■■■□□ 2.56
CD55-209ENST00000488171 ZNF777Q9ULD5 760 aaPredicted RBP31.03■■■□□ 2.56
CD55-209ENST00000488171 LMTK3Q96Q04 1460 aa31.02■■■□□ 2.56
CD55-209ENST00000488171 KIDINS220Q9ULH0 1771 aa31.01■■■□□ 2.56
CD55-209ENST00000488171 SYCP2Q9BX26 1530 aa31.01■■■□□ 2.55
CD55-209ENST00000488171 LOC105371045A0A1W2PR82 267 aa31.01■■■□□ 2.55
CD55-209ENST00000488171 CCNB3Q8WWL7 1395 aa31.01■■■□□ 2.55
CD55-209ENST00000488171 EHBP1L1Q8N3D4 1523 aa31■■■□□ 2.55
CD55-209ENST00000488171 PLPPR3Q6T4P5 718 aa30.97■■■□□ 2.55
CD55-209ENST00000488171 CFDP1Q9UEE9 299 aaPredicted RBP30.97■■■□□ 2.55
CD55-209ENST00000488171 TIAM1Q13009 1591 aa30.96■■■□□ 2.55
CD55-209ENST00000488171 KIAA1107Q9UPP5 1409 aa30.95■■■□□ 2.54
CD55-209ENST00000488171 HNRNPMP52272 730 aaKnown RBP eCLIP30.94■■■□□ 2.54
CD55-209ENST00000488171 AGLP35573 1532 aa30.94■■■□□ 2.54
CD55-209ENST00000488171 PLEKHH2Q8IVE3 1493 aa30.93■■■□□ 2.54
CD55-209ENST00000488171 SPAG9O60271 1321 aaKnown RBP30.87■■■□□ 2.53
CD55-209ENST00000488171 VPS8Q8N3P4 1428 aa30.86■■■□□ 2.53
CD55-209ENST00000488171 INO80Q9ULG1 1556 aaPredicted RBP30.85■■■□□ 2.53
CD55-209ENST00000488171 ATP7AQ04656 1500 aa30.85■■■□□ 2.53
CD55-209ENST00000488171 CEBPAP49715 358 aaPredicted RBP30.84■■■□□ 2.53
CD55-209ENST00000488171 ZNF644Q9H582 1327 aaPredicted RBP30.84■■■□□ 2.53
CD55-209ENST00000488171 HSPA2P54652 639 aa30.82■■■□□ 2.52
CD55-209ENST00000488171 SUPT6HQ7KZ85 1726 aaKnown RBP30.82■■■□□ 2.52
CD55-209ENST00000488171 NCOA2Q15596 1464 aa30.82■■■□□ 2.52
CD55-209ENST00000488171 ILDR1Q86SU0 546 aaPredicted RBP30.81■■■□□ 2.52
CD55-209ENST00000488171 MBD5Q9P267 1494 aa30.8■■■□□ 2.52
CD55-209ENST00000488171 PREX1Q8TCU6 1659 aa30.78■■■□□ 2.52
CD55-209ENST00000488171 C3P01024 1663 aa30.77■■■□□ 2.52
CD55-209ENST00000488171 PLXNC1O60486 1568 aa30.76■■■□□ 2.51
CD55-209ENST00000488171 A2MP01023 1474 aa30.73■■■□□ 2.51
CD55-209ENST00000488171 LRRC9Q6ZRR7 1453 aa30.73■■■□□ 2.51
CD55-209ENST00000488171 ESF1Q9H501 851 aaKnown RBP30.71■■■□□ 2.51
CD55-209ENST00000488171 CNTLNQ9NXG0 1405 aa30.7■■■□□ 2.5
CD55-209ENST00000488171 CAMSAP2Q08AD1 1489 aa30.69■■■□□ 2.5
CD55-209ENST00000488171 ADGBQ8N7X0 1667 aa30.69■■■□□ 2.5
CD55-209ENST00000488171 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
CD55-209ENST00000488171 RTEL1-TNFRSF6BF6WH68 1400 aa30.67■■■□□ 2.5
CD55-209ENST00000488171 SETD1BQ9UPS6 1966 aaKnown RBP30.66■■■□□ 2.5
CD55-209ENST00000488171 UHRF1BP1Q6BDS2 1440 aa30.65■■■□□ 2.5
CD55-209ENST00000488171 MROH2AA6NES4 1674 aa30.65■■■□□ 2.5
CD55-209ENST00000488171 CCDC141Q6ZP82 1450 aa30.64■■■□□ 2.5
CD55-209ENST00000488171 KANK4Q5T7N3 995 aaPredicted RBP30.64■■■□□ 2.5
CD55-209ENST00000488171 CLTCQ00610 1675 aaKnown RBP30.58■■■□□ 2.49
CD55-209ENST00000488171 ARHGEF5Q12774 1597 aa30.58■■■□□ 2.49
CD55-209ENST00000488171 ZMYM3Q14202 1370 aa30.58■■■□□ 2.49
CD55-209ENST00000488171 RSPH4AQ5TD94 716 aa30.57■■■□□ 2.48
CD55-209ENST00000488171 DHX29Q7Z478 1369 aaKnown RBP30.56■■■□□ 2.48
CD55-209ENST00000488171 GGT6Q6P531 493 aa30.55■■■□□ 2.48
CD55-209ENST00000488171 STRCQ7RTU9 1775 aa30.55■■■□□ 2.48
CD55-209ENST00000488171 NPATQ14207 1427 aa30.54■■■□□ 2.48
CD55-209ENST00000488171 MYOM3Q5VTT5 1437 aa30.5■■■□□ 2.47
CD55-209ENST00000488171 PPP6R1Q9UPN7 881 aa30.5■■■□□ 2.47
CD55-209ENST00000488171 FBXO41Q8TF61 875 aa30.48■■■□□ 2.47
CD55-209ENST00000488171 MIA2Q96PC5 1412 aa30.47■■■□□ 2.47
CD55-209ENST00000488171 TSPY4P0CV99 314 aa30.45■■■□□ 2.47
CD55-209ENST00000488171 TSPY10P0CW01 314 aa30.45■■■□□ 2.47
CD55-209ENST00000488171 PTPRKQ15262 1439 aa30.45■■■□□ 2.46
CD55-209ENST00000488171 MAST1Q9Y2H9 1570 aa30.44■■■□□ 2.46
CD55-209ENST00000488171 KIF3BO15066 747 aa30.43■■■□□ 2.46
CD55-209ENST00000488171 DMRT2Q9Y5R5 561 aa30.41■■■□□ 2.46
CD55-209ENST00000488171 MYO3AQ8NEV4 1616 aa30.4■■■□□ 2.46
CD55-209ENST00000488171 APLP2Q06481 763 aa30.4■■■□□ 2.46
CD55-209ENST00000488171 NCOA1Q15788 1441 aa30.37■■■□□ 2.45
CD55-209ENST00000488171 ZNF142P52746 1687 aaPredicted RBP30.37■■■□□ 2.45
CD55-209ENST00000488171 KDM5DQ9BY66 1539 aa30.36■■■□□ 2.45
CD55-209ENST00000488171 FAM135AQ9P2D6 1515 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms