RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 SCAPERQ9BY12 1400 aa27.93■■■□□ 2.06
ITSN1-230ENST00000488166 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
ITSN1-230ENST00000488166 YEATS2Q9ULM3 1422 aa27.92■■■□□ 2.06
ITSN1-230ENST00000488166 MAGI2Q86UL8 1455 aa27.91■■■□□ 2.06
ITSN1-230ENST00000488166 SIGLEC1Q9BZZ2 1709 aa27.91■■■□□ 2.06
ITSN1-230ENST00000488166 EFCAB2Q5VUJ9 269 aa27.89■■■□□ 2.06
ITSN1-230ENST00000488166 PLPPR3Q6T4P5 718 aa27.89■■■□□ 2.06
ITSN1-230ENST00000488166 CLIP1P30622 1438 aa27.87■■■□□ 2.05
ITSN1-230ENST00000488166 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
ITSN1-230ENST00000488166 FER1L4A9Z1Z3 1794 aa27.86■■■□□ 2.05
ITSN1-230ENST00000488166 TROQ12816 1431 aaPredicted RBP27.86■■■□□ 2.05
ITSN1-230ENST00000488166 MLECQ14165 292 aa27.85■■■□□ 2.05
ITSN1-230ENST00000488166 ARHGAP5Q13017 1502 aa27.85■■■□□ 2.05
ITSN1-230ENST00000488166 LMTK3Q96Q04 1460 aa27.81■■■□□ 2.04
ITSN1-230ENST00000488166 CDC42BPBQ9Y5S2 1711 aa27.78■■■□□ 2.04
ITSN1-230ENST00000488166 MYT1LQ9UL68 1186 aa27.78■■■□□ 2.04
ITSN1-230ENST00000488166 ATP10AO60312 1499 aa27.77■■■□□ 2.04
ITSN1-230ENST00000488166 ZNF518AQ6AHZ1 1483 aa27.76■■■□□ 2.04
ITSN1-230ENST00000488166 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
ITSN1-230ENST00000488166 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
ITSN1-230ENST00000488166 CASKIN1Q8WXD9 1431 aa27.73■■■□□ 2.03
ITSN1-230ENST00000488166 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
ITSN1-230ENST00000488166 KDM5CP41229 1560 aa27.7■■■□□ 2.03
ITSN1-230ENST00000488166 AFAP1Q8N556 730 aa27.7■■■□□ 2.02
ITSN1-230ENST00000488166 HSPA2P54652 639 aa27.69■■■□□ 2.02
ITSN1-230ENST00000488166 ARHGEF12Q9NZN5 1544 aa27.68■■■□□ 2.02
ITSN1-230ENST00000488166 CDC42BPAQ5VT25 1732 aa27.67■■■□□ 2.02
ITSN1-230ENST00000488166 ITSN2Q9NZM3 1697 aa27.65■■■□□ 2.02
ITSN1-230ENST00000488166 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
ITSN1-230ENST00000488166 FYCO1Q9BQS8 1478 aa27.64■■■□□ 2.02
ITSN1-230ENST00000488166 FBXO41Q8TF61 875 aa27.64■■■□□ 2.02
ITSN1-230ENST00000488166 ABCC1P33527 1531 aa27.62■■■□□ 2.01
ITSN1-230ENST00000488166 ABCA6Q8N139 1617 aa27.62■■■□□ 2.01
ITSN1-230ENST00000488166 PREX1Q8TCU6 1659 aa27.62■■■□□ 2.01
ITSN1-230ENST00000488166 TRAPPC8Q9Y2L5 1435 aa27.58■■■□□ 2
ITSN1-230ENST00000488166 MLH3Q9UHC1 1453 aa27.57■■■□□ 2
ITSN1-230ENST00000488166 CEBPAP49715 358 aaPredicted RBP27.57■■■□□ 2
ITSN1-230ENST00000488166 REREQ9P2R6 1566 aa27.56■■■□□ 2
ITSN1-230ENST00000488166 ZNF777Q9ULD5 760 aaPredicted RBP27.54■■■□□ 2
ITSN1-230ENST00000488166 KIDINS220Q9ULH0 1771 aa27.54■■■□□ 2
ITSN1-230ENST00000488166 ESF1Q9H501 851 aaKnown RBP27.51■■□□□ 1.99
ITSN1-230ENST00000488166 SETD1BQ9UPS6 1966 aaKnown RBP27.5■■□□□ 1.99
ITSN1-230ENST00000488166 SAMD9LQ8IVG5 1584 aa27.5■■□□□ 1.99
ITSN1-230ENST00000488166 C3P01024 1663 aa27.49■■□□□ 1.99
ITSN1-230ENST00000488166 AGLP35573 1532 aa27.46■■□□□ 1.99
ITSN1-230ENST00000488166 SYCP2Q9BX26 1530 aa27.46■■□□□ 1.99
ITSN1-230ENST00000488166 UHRF1BP1Q6BDS2 1440 aa27.45■■□□□ 1.98
ITSN1-230ENST00000488166 GPATCH8Q9UKJ3 1502 aaKnown RBP27.45■■□□□ 1.98
ITSN1-230ENST00000488166 SUPT6HQ7KZ85 1726 aaKnown RBP27.42■■□□□ 1.98
ITSN1-230ENST00000488166 HNRNPMP52272 730 aaKnown RBP eCLIP27.42■■□□□ 1.98
ITSN1-230ENST00000488166 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
ITSN1-230ENST00000488166 STRCQ7RTU9 1775 aa27.4■■□□□ 1.98
ITSN1-230ENST00000488166 CCNB3Q8WWL7 1395 aa27.4■■□□□ 1.98
ITSN1-230ENST00000488166 CFDP1Q9UEE9 299 aaPredicted RBP27.4■■□□□ 1.98
ITSN1-230ENST00000488166 SPAG9O60271 1321 aaKnown RBP27.4■■□□□ 1.98
ITSN1-230ENST00000488166 CERKQ8TCT0 537 aa27.36■■□□□ 1.97
ITSN1-230ENST00000488166 PLEKHH2Q8IVE3 1493 aa27.36■■□□□ 1.97
ITSN1-230ENST00000488166 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
ITSN1-230ENST00000488166 CNTLNQ9NXG0 1405 aa27.34■■□□□ 1.97
ITSN1-230ENST00000488166 DMRT2Q9Y5R5 561 aa27.33■■□□□ 1.97
ITSN1-230ENST00000488166 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
ITSN1-230ENST00000488166 KIAA1107Q9UPP5 1409 aa27.32■■□□□ 1.96
ITSN1-230ENST00000488166 INO80Q9ULG1 1556 aaPredicted RBP27.31■■□□□ 1.96
ITSN1-230ENST00000488166 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
ITSN1-230ENST00000488166 TIAM1Q13009 1591 aa27.3■■□□□ 1.96
ITSN1-230ENST00000488166 CLTCQ00610 1675 aaKnown RBP27.29■■□□□ 1.96
ITSN1-230ENST00000488166 CEP162Q5TB80 1403 aa27.27■■□□□ 1.96
ITSN1-230ENST00000488166 ADGBQ8N7X0 1667 aa27.27■■□□□ 1.96
ITSN1-230ENST00000488166 A2MP01023 1474 aa27.26■■□□□ 1.95
ITSN1-230ENST00000488166 PLXNC1O60486 1568 aa27.24■■□□□ 1.95
ITSN1-230ENST00000488166 ZNF644Q9H582 1327 aaPredicted RBP27.22■■□□□ 1.95
ITSN1-230ENST00000488166 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
ITSN1-230ENST00000488166 GGT6Q6P531 493 aa27.21■■□□□ 1.95
ITSN1-230ENST00000488166 NPATQ14207 1427 aa27.19■■□□□ 1.94
ITSN1-230ENST00000488166 PTPRTO14522 1441 aa27.18■■□□□ 1.94
ITSN1-230ENST00000488166 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
ITSN1-230ENST00000488166 MBD5Q9P267 1494 aa27.14■■□□□ 1.94
ITSN1-230ENST00000488166 NCOA1Q15788 1441 aa27.14■■□□□ 1.93
ITSN1-230ENST00000488166 MYO3AQ8NEV4 1616 aa27.13■■□□□ 1.93
ITSN1-230ENST00000488166 NCOA2Q15596 1464 aa27.11■■□□□ 1.93
ITSN1-230ENST00000488166 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
ITSN1-230ENST00000488166 RTEL1-TNFRSF6BF6WH68 1400 aa27.1■■□□□ 1.93
ITSN1-230ENST00000488166 CAMSAP2Q08AD1 1489 aa27.09■■□□□ 1.93
ITSN1-230ENST00000488166 CCDC141Q6ZP82 1450 aa27.07■■□□□ 1.92
ITSN1-230ENST00000488166 CEP170BQ9Y4F5 1589 aaPredicted RBP27.06■■□□□ 1.92
ITSN1-230ENST00000488166 PPP6R1Q9UPN7 881 aa27.06■■□□□ 1.92
ITSN1-230ENST00000488166 PTPRKQ15262 1439 aa27.06■■□□□ 1.92
ITSN1-230ENST00000488166 DHX29Q7Z478 1369 aaKnown RBP27.05■■□□□ 1.92
ITSN1-230ENST00000488166 NCKAP5LQ9HCH0 1330 aa27.03■■□□□ 1.92
ITSN1-230ENST00000488166 LTBP4Q8N2S1 1624 aa27.02■■□□□ 1.92
ITSN1-230ENST00000488166 KIF3BO15066 747 aa27.01■■□□□ 1.91
ITSN1-230ENST00000488166 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
ITSN1-230ENST00000488166 RSPH4AQ5TD94 716 aa27■■□□□ 1.91
ITSN1-230ENST00000488166 VPS8Q8N3P4 1428 aa26.99■■□□□ 1.91
ITSN1-230ENST00000488166 ARHGEF5Q12774 1597 aa26.97■■□□□ 1.91
ITSN1-230ENST00000488166 PLA2R1Q13018 1463 aa26.97■■□□□ 1.91
ITSN1-230ENST00000488166 LRRC9Q6ZRR7 1453 aa26.96■■□□□ 1.91
ITSN1-230ENST00000488166 TSPY4P0CV99 314 aa26.96■■□□□ 1.91
ITSN1-230ENST00000488166 TSPY10P0CW01 314 aa26.96■■□□□ 1.91
ITSN1-230ENST00000488166 PKD2Q13563 968 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms