RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HECW2Q9P2P5 1572 aa18.31■□□□□ 0.52
NIPAL3-207ENST00000488155 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
NIPAL3-207ENST00000488155 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
NIPAL3-207ENST00000488155 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
NIPAL3-207ENST00000488155 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
NIPAL3-207ENST00000488155 YEATS2Q9ULM3 1422 aa18.29■□□□□ 0.52
NIPAL3-207ENST00000488155 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
NIPAL3-207ENST00000488155 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
NIPAL3-207ENST00000488155 RIMS1Q86UR5 1692 aaKnown RBP18.28■□□□□ 0.52
NIPAL3-207ENST00000488155 CDC42BPAQ5VT25 1732 aa18.27■□□□□ 0.52
NIPAL3-207ENST00000488155 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.52
NIPAL3-207ENST00000488155 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
NIPAL3-207ENST00000488155 PTPRMP28827 1452 aa18.26■□□□□ 0.51
NIPAL3-207ENST00000488155 MLECQ14165 292 aa18.25■□□□□ 0.51
NIPAL3-207ENST00000488155 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
NIPAL3-207ENST00000488155 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
NIPAL3-207ENST00000488155 MYT1LQ9UL68 1186 aa18.24■□□□□ 0.51
NIPAL3-207ENST00000488155 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
NIPAL3-207ENST00000488155 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
NIPAL3-207ENST00000488155 FER1L4A9Z1Z3 1794 aa18.2■□□□□ 0.5
NIPAL3-207ENST00000488155 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
NIPAL3-207ENST00000488155 ZNF777Q9ULD5 760 aaPredicted RBP18.19■□□□□ 0.5
NIPAL3-207ENST00000488155 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
NIPAL3-207ENST00000488155 ZNF518AQ6AHZ1 1483 aa18.18■□□□□ 0.5
NIPAL3-207ENST00000488155 LOC105371045A0A1W2PR82 267 aa18.17■□□□□ 0.5
NIPAL3-207ENST00000488155 ATP10AO60312 1499 aa18.17■□□□□ 0.5
NIPAL3-207ENST00000488155 ARHGEF12Q9NZN5 1544 aa18.16■□□□□ 0.5
NIPAL3-207ENST00000488155 KDM5CP41229 1560 aa18.16■□□□□ 0.5
NIPAL3-207ENST00000488155 ABCC1P33527 1531 aa18.15■□□□□ 0.5
NIPAL3-207ENST00000488155 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
NIPAL3-207ENST00000488155 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
NIPAL3-207ENST00000488155 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
NIPAL3-207ENST00000488155 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
NIPAL3-207ENST00000488155 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
NIPAL3-207ENST00000488155 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
NIPAL3-207ENST00000488155 SAMD9LQ8IVG5 1584 aa18.12■□□□□ 0.49
NIPAL3-207ENST00000488155 KIDINS220Q9ULH0 1771 aa18.1■□□□□ 0.49
NIPAL3-207ENST00000488155 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
NIPAL3-207ENST00000488155 HNRNPMP52272 730 aaKnown RBP eCLIP18.09■□□□□ 0.49
NIPAL3-207ENST00000488155 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.49
NIPAL3-207ENST00000488155 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
NIPAL3-207ENST00000488155 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
NIPAL3-207ENST00000488155 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
NIPAL3-207ENST00000488155 LMTK3Q96Q04 1460 aa18.05■□□□□ 0.48
NIPAL3-207ENST00000488155 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
NIPAL3-207ENST00000488155 EHBP1L1Q8N3D4 1523 aa18.04■□□□□ 0.48
NIPAL3-207ENST00000488155 SUPT6HQ7KZ85 1726 aaKnown RBP18.04■□□□□ 0.48
NIPAL3-207ENST00000488155 HSPA2P54652 639 aa18.04■□□□□ 0.48
NIPAL3-207ENST00000488155 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
NIPAL3-207ENST00000488155 REREQ9P2R6 1566 aa18.02■□□□□ 0.48
NIPAL3-207ENST00000488155 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
NIPAL3-207ENST00000488155 ZNF644Q9H582 1327 aaPredicted RBP18.01■□□□□ 0.47
NIPAL3-207ENST00000488155 ILDR1Q86SU0 546 aaPredicted RBP18.01■□□□□ 0.47
NIPAL3-207ENST00000488155 C3P01024 1663 aa17.99■□□□□ 0.47
NIPAL3-207ENST00000488155 PLEKHH2Q8IVE3 1493 aa17.98■□□□□ 0.47
NIPAL3-207ENST00000488155 ATP7AQ04656 1500 aa17.98■□□□□ 0.47
NIPAL3-207ENST00000488155 PREX1Q8TCU6 1659 aa17.97■□□□□ 0.47
NIPAL3-207ENST00000488155 ESF1Q9H501 851 aaKnown RBP17.97■□□□□ 0.47
NIPAL3-207ENST00000488155 AGLP35573 1532 aa17.97■□□□□ 0.47
NIPAL3-207ENST00000488155 KIAA1107Q9UPP5 1409 aa17.97■□□□□ 0.47
NIPAL3-207ENST00000488155 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
NIPAL3-207ENST00000488155 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.46
NIPAL3-207ENST00000488155 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
NIPAL3-207ENST00000488155 ADGBQ8N7X0 1667 aa17.92■□□□□ 0.46
NIPAL3-207ENST00000488155 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
NIPAL3-207ENST00000488155 A2MP01023 1474 aa17.9■□□□□ 0.46
NIPAL3-207ENST00000488155 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
NIPAL3-207ENST00000488155 CAMSAP2Q08AD1 1489 aa17.89■□□□□ 0.45
NIPAL3-207ENST00000488155 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
NIPAL3-207ENST00000488155 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
NIPAL3-207ENST00000488155 GGT6Q6P531 493 aa17.88■□□□□ 0.45
NIPAL3-207ENST00000488155 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
NIPAL3-207ENST00000488155 STRCQ7RTU9 1775 aa17.86■□□□□ 0.45
NIPAL3-207ENST00000488155 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
NIPAL3-207ENST00000488155 MROH2AA6NES4 1674 aa17.86■□□□□ 0.45
NIPAL3-207ENST00000488155 CCDC141Q6ZP82 1450 aa17.84■□□□□ 0.45
NIPAL3-207ENST00000488155 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
NIPAL3-207ENST00000488155 ZMYM3Q14202 1370 aa17.82■□□□□ 0.44
NIPAL3-207ENST00000488155 RTEL1-TNFRSF6BF6WH68 1400 aa17.81■□□□□ 0.44
NIPAL3-207ENST00000488155 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
NIPAL3-207ENST00000488155 APLP2Q06481 763 aa17.8■□□□□ 0.44
NIPAL3-207ENST00000488155 MAP3K1Q13233 1512 aa17.8■□□□□ 0.44
NIPAL3-207ENST00000488155 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
NIPAL3-207ENST00000488155 KIF3BO15066 747 aa17.79■□□□□ 0.44
NIPAL3-207ENST00000488155 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
NIPAL3-207ENST00000488155 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
NIPAL3-207ENST00000488155 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
NIPAL3-207ENST00000488155 RSPH4AQ5TD94 716 aa17.78■□□□□ 0.44
NIPAL3-207ENST00000488155 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
NIPAL3-207ENST00000488155 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
NIPAL3-207ENST00000488155 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
NIPAL3-207ENST00000488155 NPATQ14207 1427 aa17.72■□□□□ 0.43
NIPAL3-207ENST00000488155 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
NIPAL3-207ENST00000488155 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
NIPAL3-207ENST00000488155 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
NIPAL3-207ENST00000488155 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
NIPAL3-207ENST00000488155 MIA2Q96PC5 1412 aa17.71■□□□□ 0.43
NIPAL3-207ENST00000488155 PTPN23Q9H3S7 1636 aa17.7■□□□□ 0.42
NIPAL3-207ENST00000488155 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
NIPAL3-207ENST00000488155 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms