RNA–Protein interactions for RNA: ENST00000488145.1

NPDC1-205, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-205ENST00000488145 TIAM1Q13009 1591 aa28.74■■■□□ 2.19
NPDC1-205ENST00000488145 FRMPD1Q5SYB0 1578 aa28.74■■■□□ 2.19
NPDC1-205ENST00000488145 RICTORQ6R327 1708 aa28.74■■■□□ 2.19
NPDC1-205ENST00000488145 DENND4BO75064 1496 aaPredicted RBP28.73■■■□□ 2.19
NPDC1-205ENST00000488145 ADGRL1O94910 1474 aa28.72■■■□□ 2.19
NPDC1-205ENST00000488145 RAPGEF3O95398 923 aa28.72■■■□□ 2.19
NPDC1-205ENST00000488145 SCAPERQ9BY12 1400 aa28.67■■■□□ 2.18
NPDC1-205ENST00000488145 SUPT6HQ7KZ85 1726 aaKnown RBP28.64■■■□□ 2.18
NPDC1-205ENST00000488145 MAP3K1Q13233 1512 aa28.64■■■□□ 2.17
NPDC1-205ENST00000488145 GPATCH8Q9UKJ3 1502 aaKnown RBP28.63■■■□□ 2.17
NPDC1-205ENST00000488145 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
NPDC1-205ENST00000488145 POGZQ7Z3K3 1410 aa28.61■■■□□ 2.17
NPDC1-205ENST00000488145 ZMYM4Q5VZL5 1548 aa28.61■■■□□ 2.17
NPDC1-205ENST00000488145 ITSN2Q9NZM3 1697 aa28.61■■■□□ 2.17
NPDC1-205ENST00000488145 LRRC9Q6ZRR7 1453 aa28.59■■■□□ 2.17
NPDC1-205ENST00000488145 ABCC1P33527 1531 aa28.58■■■□□ 2.17
NPDC1-205ENST00000488145 ARHGEF40Q8TER5 1519 aa28.55■■■□□ 2.16
NPDC1-205ENST00000488145 NCOA2Q15596 1464 aa28.55■■■□□ 2.16
NPDC1-205ENST00000488145 ZNF518AQ6AHZ1 1483 aa28.55■■■□□ 2.16
NPDC1-205ENST00000488145 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
NPDC1-205ENST00000488145 APLP2Q06481 763 aa28.54■■■□□ 2.16
NPDC1-205ENST00000488145 CFDP1Q9UEE9 299 aaPredicted RBP28.53■■■□□ 2.16
NPDC1-205ENST00000488145 ZNF777Q9ULD5 760 aaPredicted RBP28.53■■■□□ 2.16
NPDC1-205ENST00000488145 MAGI2Q86UL8 1455 aa28.53■■■□□ 2.16
NPDC1-205ENST00000488145 ZFYVE16Q7Z3T8 1539 aa28.52■■■□□ 2.16
NPDC1-205ENST00000488145 KDM5CP41229 1560 aa28.5■■■□□ 2.15
NPDC1-205ENST00000488145 ARHGEF12Q9NZN5 1544 aa28.49■■■□□ 2.15
NPDC1-205ENST00000488145 KANK4Q5T7N3 995 aaPredicted RBP28.48■■■□□ 2.15
NPDC1-205ENST00000488145 SYCP2Q9BX26 1530 aa28.47■■■□□ 2.15
NPDC1-205ENST00000488145 PLEKHH2Q8IVE3 1493 aa28.46■■■□□ 2.15
NPDC1-205ENST00000488145 YEATS2Q9ULM3 1422 aa28.46■■■□□ 2.15
NPDC1-205ENST00000488145 AFAP1Q8N556 730 aa28.46■■■□□ 2.15
NPDC1-205ENST00000488145 HECW2Q9P2P5 1572 aa28.45■■■□□ 2.15
NPDC1-205ENST00000488145 TRAPPC8Q9Y2L5 1435 aa28.45■■■□□ 2.15
NPDC1-205ENST00000488145 KIAA1107Q9UPP5 1409 aa28.42■■■□□ 2.14
NPDC1-205ENST00000488145 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
NPDC1-205ENST00000488145 HNRNPMP52272 730 aaKnown RBP eCLIP28.39■■■□□ 2.14
NPDC1-205ENST00000488145 MLH3Q9UHC1 1453 aa28.38■■■□□ 2.13
NPDC1-205ENST00000488145 ARID4BQ4LE39 1312 aaPredicted RBP28.38■■■□□ 2.13
NPDC1-205ENST00000488145 ATP10AO60312 1499 aa28.36■■■□□ 2.13
NPDC1-205ENST00000488145 ZNF644Q9H582 1327 aaPredicted RBP28.36■■■□□ 2.13
NPDC1-205ENST00000488145 BCORL1Q5H9F3 1711 aa28.35■■■□□ 2.13
NPDC1-205ENST00000488145 KIDINS220Q9ULH0 1771 aa28.35■■■□□ 2.13
NPDC1-205ENST00000488145 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
NPDC1-205ENST00000488145 DIP2CQ9Y2E4 1556 aa28.34■■■□□ 2.13
NPDC1-205ENST00000488145 ABCA6Q8N139 1617 aa28.34■■■□□ 2.13
NPDC1-205ENST00000488145 SIGLEC1Q9BZZ2 1709 aa28.34■■■□□ 2.13
NPDC1-205ENST00000488145 C9orf84Q5VXU9 1444 aa28.34■■■□□ 2.13
NPDC1-205ENST00000488145 MYOM3Q5VTT5 1437 aa28.32■■■□□ 2.12
NPDC1-205ENST00000488145 ADAMTSL3P82987 1691 aa28.31■■■□□ 2.12
NPDC1-205ENST00000488145 SPAG9O60271 1321 aaKnown RBP28.3■■■□□ 2.12
NPDC1-205ENST00000488145 MBD5Q9P267 1494 aa28.28■■■□□ 2.12
NPDC1-205ENST00000488145 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
NPDC1-205ENST00000488145 ATP7AQ04656 1500 aa28.28■■■□□ 2.12
NPDC1-205ENST00000488145 REREQ9P2R6 1566 aa28.27■■■□□ 2.12
NPDC1-205ENST00000488145 MIA2Q96PC5 1412 aa28.26■■■□□ 2.12
NPDC1-205ENST00000488145 CCDC141Q6ZP82 1450 aa28.23■■■□□ 2.11
NPDC1-205ENST00000488145 MADDQ8WXG6 1647 aa28.23■■■□□ 2.11
NPDC1-205ENST00000488145 ARHGEF5Q12774 1597 aa28.23■■■□□ 2.11
NPDC1-205ENST00000488145 RSPH4AQ5TD94 716 aa28.2■■■□□ 2.1
NPDC1-205ENST00000488145 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
NPDC1-205ENST00000488145 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
NPDC1-205ENST00000488145 PTPN23Q9H3S7 1636 aa28.18■■■□□ 2.1
NPDC1-205ENST00000488145 RIMS1Q86UR5 1692 aaKnown RBP28.17■■■□□ 2.1
NPDC1-205ENST00000488145 MLECQ14165 292 aa28.17■■■□□ 2.1
NPDC1-205ENST00000488145 AGLP35573 1532 aa28.16■■■□□ 2.1
NPDC1-205ENST00000488145 RTEL1-TNFRSF6BF6WH68 1400 aa28.16■■■□□ 2.1
NPDC1-205ENST00000488145 FGD6Q6ZV73 1430 aa28.14■■■□□ 2.1
NPDC1-205ENST00000488145 PTPRMP28827 1452 aa28.12■■■□□ 2.09
NPDC1-205ENST00000488145 A2MP01023 1474 aa28.11■■■□□ 2.09
NPDC1-205ENST00000488145 TSPY4P0CV99 314 aa28.1■■■□□ 2.09
NPDC1-205ENST00000488145 TSPY10P0CW01 314 aa28.1■■■□□ 2.09
NPDC1-205ENST00000488145 PLXNC1O60486 1568 aa28.1■■■□□ 2.09
NPDC1-205ENST00000488145 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
NPDC1-205ENST00000488145 MAST1Q9Y2H9 1570 aa28.07■■■□□ 2.08
NPDC1-205ENST00000488145 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
NPDC1-205ENST00000488145 ILDR1Q86SU0 546 aaPredicted RBP28.05■■■□□ 2.08
NPDC1-205ENST00000488145 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
NPDC1-205ENST00000488145 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
NPDC1-205ENST00000488145 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
NPDC1-205ENST00000488145 SHANK2Q9UPX8 1470 aa27.98■■■□□ 2.07
NPDC1-205ENST00000488145 ABCC5O15440 1437 aa27.98■■■□□ 2.07
NPDC1-205ENST00000488145 DAPK1P53355 1430 aa27.98■■■□□ 2.07
NPDC1-205ENST00000488145 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
NPDC1-205ENST00000488145 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.06
NPDC1-205ENST00000488145 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
NPDC1-205ENST00000488145 CNTLNQ9NXG0 1405 aa27.92■■■□□ 2.06
NPDC1-205ENST00000488145 GGT6Q6P531 493 aa27.91■■■□□ 2.06
NPDC1-205ENST00000488145 MROH2AA6NES4 1674 aa27.91■■■□□ 2.06
NPDC1-205ENST00000488145 C3P01024 1663 aa27.91■■■□□ 2.06
NPDC1-205ENST00000488145 CLTCQ00610 1675 aaKnown RBP27.89■■■□□ 2.06
NPDC1-205ENST00000488145 KIF3BO15066 747 aa27.88■■■□□ 2.05
NPDC1-205ENST00000488145 DUOX2Q9NRD8 1548 aa27.87■■■□□ 2.05
NPDC1-205ENST00000488145 EIF2AK4Q9P2K8 1649 aaKnown RBP27.87■■■□□ 2.05
NPDC1-205ENST00000488145 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
NPDC1-205ENST00000488145 CEBPAP49715 358 aaPredicted RBP27.84■■■□□ 2.05
NPDC1-205ENST00000488145 PPP6R1Q9UPN7 881 aa27.84■■■□□ 2.05
NPDC1-205ENST00000488145 CHIC2Q9UKJ5 165 aa27.83■■■□□ 2.05
NPDC1-205ENST00000488145 ANKRD30AQ9BXX3 1397 aa27.83■■■□□ 2.05
NPDC1-205ENST00000488145 RRP7BPQ9NSQ0 103 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms