RNA–Protein interactions for RNA: ENST00000487902.5

PDE6B-210, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-210ENST00000487902 RICTORQ6R327 1708 aa27.95■■■□□ 2.07
PDE6B-210ENST00000487902 SCAPERQ9BY12 1400 aa27.95■■■□□ 2.07
PDE6B-210ENST00000487902 CDC42BPBQ9Y5S2 1711 aa27.94■■■□□ 2.06
PDE6B-210ENST00000487902 FRMPD1Q5SYB0 1578 aa27.93■■■□□ 2.06
PDE6B-210ENST00000487902 TIAM1Q13009 1591 aa27.92■■■□□ 2.06
PDE6B-210ENST00000487902 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
PDE6B-210ENST00000487902 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
PDE6B-210ENST00000487902 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
PDE6B-210ENST00000487902 POGZQ7Z3K3 1410 aa27.9■■■□□ 2.06
PDE6B-210ENST00000487902 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
PDE6B-210ENST00000487902 ZMYM4Q5VZL5 1548 aa27.89■■■□□ 2.06
PDE6B-210ENST00000487902 APLP2Q06481 763 aa27.88■■■□□ 2.05
PDE6B-210ENST00000487902 ZNF518AQ6AHZ1 1483 aa27.87■■■□□ 2.05
PDE6B-210ENST00000487902 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
PDE6B-210ENST00000487902 SUPT6HQ7KZ85 1726 aaKnown RBP27.86■■■□□ 2.05
PDE6B-210ENST00000487902 ITSN2Q9NZM3 1697 aa27.84■■■□□ 2.05
PDE6B-210ENST00000487902 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
PDE6B-210ENST00000487902 ARHGEF40Q8TER5 1519 aa27.82■■■□□ 2.04
PDE6B-210ENST00000487902 PLEKHH2Q8IVE3 1493 aa27.82■■■□□ 2.04
PDE6B-210ENST00000487902 ABCC1P33527 1531 aa27.81■■■□□ 2.04
PDE6B-210ENST00000487902 ZFYVE16Q7Z3T8 1539 aa27.81■■■□□ 2.04
PDE6B-210ENST00000487902 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
PDE6B-210ENST00000487902 KDM4FA0A1W2PPD8 638 aa27.79■■■□□ 2.04
PDE6B-210ENST00000487902 ZNF777Q9ULD5 760 aaPredicted RBP27.79■■■□□ 2.04
PDE6B-210ENST00000487902 KDM5CP41229 1560 aa27.77■■■□□ 2.04
PDE6B-210ENST00000487902 NCOA2Q15596 1464 aa27.76■■■□□ 2.04
PDE6B-210ENST00000487902 KIAA1107Q9UPP5 1409 aa27.75■■■□□ 2.03
PDE6B-210ENST00000487902 SAMD9LQ8IVG5 1584 aa27.73■■■□□ 2.03
PDE6B-210ENST00000487902 MYT1LQ9UL68 1186 aa27.73■■■□□ 2.03
PDE6B-210ENST00000487902 ARID4BQ4LE39 1312 aaPredicted RBP27.72■■■□□ 2.03
PDE6B-210ENST00000487902 AFAP1Q8N556 730 aa27.72■■■□□ 2.03
PDE6B-210ENST00000487902 HECW2Q9P2P5 1572 aa27.72■■■□□ 2.03
PDE6B-210ENST00000487902 MLH3Q9UHC1 1453 aa27.7■■■□□ 2.03
PDE6B-210ENST00000487902 YEATS2Q9ULM3 1422 aa27.69■■■□□ 2.02
PDE6B-210ENST00000487902 ATP10AO60312 1499 aa27.69■■■□□ 2.02
PDE6B-210ENST00000487902 SYCP2Q9BX26 1530 aa27.68■■■□□ 2.02
PDE6B-210ENST00000487902 ARHGEF12Q9NZN5 1544 aa27.68■■■□□ 2.02
PDE6B-210ENST00000487902 TRAPPC8Q9Y2L5 1435 aa27.67■■■□□ 2.02
PDE6B-210ENST00000487902 C9orf84Q5VXU9 1444 aa27.66■■■□□ 2.02
PDE6B-210ENST00000487902 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
PDE6B-210ENST00000487902 HNRNPMP52272 730 aaKnown RBP eCLIP27.63■■■□□ 2.01
PDE6B-210ENST00000487902 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
PDE6B-210ENST00000487902 BCORL1Q5H9F3 1711 aa27.61■■■□□ 2.01
PDE6B-210ENST00000487902 SPAG9O60271 1321 aaKnown RBP27.61■■■□□ 2.01
PDE6B-210ENST00000487902 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
PDE6B-210ENST00000487902 ADAMTSL3P82987 1691 aa27.58■■■□□ 2.01
PDE6B-210ENST00000487902 DIP2CQ9Y2E4 1556 aa27.57■■■□□ 2
PDE6B-210ENST00000487902 MIA2Q96PC5 1412 aa27.57■■■□□ 2
PDE6B-210ENST00000487902 CAMSAP2Q08AD1 1489 aa27.57■■■□□ 2
PDE6B-210ENST00000487902 KIDINS220Q9ULH0 1771 aa27.56■■■□□ 2
PDE6B-210ENST00000487902 MYOM3Q5VTT5 1437 aa27.56■■■□□ 2
PDE6B-210ENST00000487902 ZNF644Q9H582 1327 aaPredicted RBP27.55■■■□□ 2
PDE6B-210ENST00000487902 ABCA6Q8N139 1617 aa27.55■■■□□ 2
PDE6B-210ENST00000487902 ATP7AQ04656 1500 aa27.53■■■□□ 2
PDE6B-210ENST00000487902 MBD5Q9P267 1494 aa27.53■■■□□ 2
PDE6B-210ENST00000487902 CCDC141Q6ZP82 1450 aa27.51■■■□□ 2
PDE6B-210ENST00000487902 INO80Q9ULG1 1556 aaPredicted RBP27.51■■□□□ 1.99
PDE6B-210ENST00000487902 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
PDE6B-210ENST00000487902 AGLP35573 1532 aa27.49■■□□□ 1.99
PDE6B-210ENST00000487902 ARHGEF5Q12774 1597 aa27.48■■□□□ 1.99
PDE6B-210ENST00000487902 MADDQ8WXG6 1647 aa27.48■■□□□ 1.99
PDE6B-210ENST00000487902 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
PDE6B-210ENST00000487902 TSPY4P0CV99 314 aa27.46■■□□□ 1.99
PDE6B-210ENST00000487902 TSPY10P0CW01 314 aa27.46■■□□□ 1.99
PDE6B-210ENST00000487902 PTPRMP28827 1452 aa27.45■■□□□ 1.99
PDE6B-210ENST00000487902 MLECQ14165 292 aa27.44■■□□□ 1.98
PDE6B-210ENST00000487902 ADGBQ8N7X0 1667 aa27.43■■□□□ 1.98
PDE6B-210ENST00000487902 FER1L4A9Z1Z3 1794 aa27.42■■□□□ 1.98
PDE6B-210ENST00000487902 RIMS1Q86UR5 1692 aaKnown RBP27.41■■□□□ 1.98
PDE6B-210ENST00000487902 A2MP01023 1474 aa27.4■■□□□ 1.98
PDE6B-210ENST00000487902 ESF1Q9H501 851 aaKnown RBP27.38■■□□□ 1.97
PDE6B-210ENST00000487902 FGD6Q6ZV73 1430 aa27.37■■□□□ 1.97
PDE6B-210ENST00000487902 PTPN23Q9H3S7 1636 aa27.37■■□□□ 1.97
PDE6B-210ENST00000487902 PLXNC1O60486 1568 aa27.35■■□□□ 1.97
PDE6B-210ENST00000487902 MAST1Q9Y2H9 1570 aa27.34■■□□□ 1.97
PDE6B-210ENST00000487902 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
PDE6B-210ENST00000487902 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
PDE6B-210ENST00000487902 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
PDE6B-210ENST00000487902 PPP6R1Q9UPN7 881 aa27.28■■□□□ 1.96
PDE6B-210ENST00000487902 SHANK2Q9UPX8 1470 aa27.27■■□□□ 1.96
PDE6B-210ENST00000487902 DNMT1P26358 1616 aaKnown RBP27.24■■□□□ 1.95
PDE6B-210ENST00000487902 CROCC2H7BZ55 1655 aa27.24■■□□□ 1.95
PDE6B-210ENST00000487902 DAPK1P53355 1430 aa27.22■■□□□ 1.95
PDE6B-210ENST00000487902 GGT6Q6P531 493 aa27.21■■□□□ 1.95
PDE6B-210ENST00000487902 ABCC5O15440 1437 aa27.21■■□□□ 1.95
PDE6B-210ENST00000487902 MROH2AA6NES4 1674 aa27.2■■□□□ 1.94
PDE6B-210ENST00000487902 FAM50AQ14320 339 aaKnown RBP27.19■■□□□ 1.94
PDE6B-210ENST00000487902 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
PDE6B-210ENST00000487902 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
PDE6B-210ENST00000487902 KIF3BO15066 747 aa27.18■■□□□ 1.94
PDE6B-210ENST00000487902 SETD1BQ9UPS6 1966 aaKnown RBP27.17■■□□□ 1.94
PDE6B-210ENST00000487902 DUOX2Q9NRD8 1548 aa27.16■■□□□ 1.94
PDE6B-210ENST00000487902 ANKRD30AQ9BXX3 1397 aa27.15■■□□□ 1.94
PDE6B-210ENST00000487902 EIF2AK4Q9P2K8 1649 aaKnown RBP27.15■■□□□ 1.94
PDE6B-210ENST00000487902 C3P01024 1663 aa27.14■■□□□ 1.93
PDE6B-210ENST00000487902 KIF15Q9NS87 1388 aa27.12■■□□□ 1.93
PDE6B-210ENST00000487902 CLTCQ00610 1675 aaKnown RBP27.11■■□□□ 1.93
PDE6B-210ENST00000487902 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
PDE6B-210ENST00000487902 ZMYM3Q14202 1370 aa27.1■■□□□ 1.93
PDE6B-210ENST00000487902 PREX1Q8TCU6 1659 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms