RNA–Protein interactions for RNA: ENST00000487846.1

TNIK-213, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 4

Gene TNIK, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-213ENST00000487846 HRCP23327 699 aa11.1□□□□□ -0.63
TNIK-213ENST00000487846 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
TNIK-213ENST00000487846 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
TNIK-213ENST00000487846 TIE1P35590 1138 aa11.08□□□□□ -0.64
TNIK-213ENST00000487846 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
TNIK-213ENST00000487846 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
TNIK-213ENST00000487846 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
TNIK-213ENST00000487846 SCUBE2Q9NQ36 999 aa11.05□□□□□ -0.64
TNIK-213ENST00000487846 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
TNIK-213ENST00000487846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
TNIK-213ENST00000487846 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
TNIK-213ENST00000487846 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
TNIK-213ENST00000487846 CCDC9Q9Y3X0 531 aaKnown RBP11□□□□□ -0.65
TNIK-213ENST00000487846 ZMYND10O75800 440 aa10.99□□□□□ -0.65
TNIK-213ENST00000487846 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
TNIK-213ENST00000487846 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
TNIK-213ENST00000487846 ZBTB7CA1YPR0 619 aa10.97□□□□□ -0.65
TNIK-213ENST00000487846 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
TNIK-213ENST00000487846 ARID3AQ99856 593 aa10.96□□□□□ -0.65
TNIK-213ENST00000487846 SMYD5Q6GMV2 418 aa10.95□□□□□ -0.66
TNIK-213ENST00000487846 PDAP1Q13442 181 aaKnown RBP10.94□□□□□ -0.66
TNIK-213ENST00000487846 PSEN1P49768 467 aa10.93□□□□□ -0.66
TNIK-213ENST00000487846 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
TNIK-213ENST00000487846 SEC24BO95487 1268 aa10.92□□□□□ -0.66
TNIK-213ENST00000487846 PDIA4P13667 645 aaKnown RBP10.92□□□□□ -0.66
TNIK-213ENST00000487846 IER5LQ5T953 404 aa10.92□□□□□ -0.66
TNIK-213ENST00000487846 SEMA3EO15041 775 aa10.91□□□□□ -0.66
TNIK-213ENST00000487846 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
TNIK-213ENST00000487846 E2F4Q16254 413 aa10.9□□□□□ -0.66
TNIK-213ENST00000487846 BARGINQ6ZT62 677 aa10.9□□□□□ -0.66
TNIK-213ENST00000487846 AK7Q96M32 723 aa10.88□□□□□ -0.67
TNIK-213ENST00000487846 IL27Q8NEV9 243 aa10.86□□□□□ -0.67
TNIK-213ENST00000487846 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
TNIK-213ENST00000487846 GPBP1L1Q9HC44 474 aaPredicted RBP10.83□□□□□ -0.68
TNIK-213ENST00000487846 APBB1O00213 710 aa10.81□□□□□ -0.68
TNIK-213ENST00000487846 ST18O60284 1047 aa10.81□□□□□ -0.68
TNIK-213ENST00000487846 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
TNIK-213ENST00000487846 FLIIQ13045 1269 aa10.78□□□□□ -0.68
TNIK-213ENST00000487846 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
TNIK-213ENST00000487846 IRX5P78411 483 aaPredicted RBP10.77□□□□□ -0.69
TNIK-213ENST00000487846 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
TNIK-213ENST00000487846 KRI1Q8N9T8 703 aaKnown RBP10.77□□□□□ -0.69
TNIK-213ENST00000487846 SLAIN1Q8ND83 568 aa10.77□□□□□ -0.69
TNIK-213ENST00000487846 PLCG2P16885 1265 aa10.76□□□□□ -0.69
TNIK-213ENST00000487846 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
TNIK-213ENST00000487846 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
TNIK-213ENST00000487846 EFCAB3Q8N7B9 438 aa10.74□□□□□ -0.69
TNIK-213ENST00000487846 PDE4DQ08499 809 aa10.7□□□□□ -0.7
TNIK-213ENST00000487846 GPIHBP1Q8IV16 184 aa10.7□□□□□ -0.7
TNIK-213ENST00000487846 PDCD7Q8N8D1 485 aaKnown RBP10.7□□□□□ -0.7
TNIK-213ENST00000487846 OCEL1Q9H607 264 aa10.7□□□□□ -0.7
TNIK-213ENST00000487846 TRIM66O15016 1216 aa10.69□□□□□ -0.7
TNIK-213ENST00000487846 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
TNIK-213ENST00000487846 NECTIN2Q92692 538 aa10.69□□□□□ -0.7
TNIK-213ENST00000487846 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
TNIK-213ENST00000487846 SOX12O15370 315 aa10.68□□□□□ -0.7
TNIK-213ENST00000487846 MFRPQ9BY79 579 aa10.67□□□□□ -0.7
TNIK-213ENST00000487846 KCTD17Q8N5Z5 321 aa10.65□□□□□ -0.7
TNIK-213ENST00000487846 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
TNIK-213ENST00000487846 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
TNIK-213ENST00000487846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.7
TNIK-213ENST00000487846 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
TNIK-213ENST00000487846 A6NJR5 290 aa10.64□□□□□ -0.71
TNIK-213ENST00000487846 CCDC82Q8N4S0 544 aa10.64□□□□□ -0.71
TNIK-213ENST00000487846 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
TNIK-213ENST00000487846 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
TNIK-213ENST00000487846 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
TNIK-213ENST00000487846 TRAIPQ9BWF2 469 aa10.61□□□□□ -0.71
TNIK-213ENST00000487846 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
TNIK-213ENST00000487846 RBM26Q5T8P6 1007 aaKnown RBP10.6□□□□□ -0.71
TNIK-213ENST00000487846 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
TNIK-213ENST00000487846 TRAK2O60296 914 aa10.59□□□□□ -0.71
TNIK-213ENST00000487846 PDE4AP27815 886 aa10.59□□□□□ -0.71
TNIK-213ENST00000487846 NLRP6P59044 892 aa10.59□□□□□ -0.71
TNIK-213ENST00000487846 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
TNIK-213ENST00000487846 SNPHO15079 494 aa10.57□□□□□ -0.72
TNIK-213ENST00000487846 MFSD10Q14728 455 aa10.57□□□□□ -0.72
TNIK-213ENST00000487846 PPP1R37O75864 691 aa10.56□□□□□ -0.72
TNIK-213ENST00000487846 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
TNIK-213ENST00000487846 RAD21O60216 631 aa10.55□□□□□ -0.72
TNIK-213ENST00000487846 ONECUT3O60422 494 aaPredicted RBP10.54□□□□□ -0.72
TNIK-213ENST00000487846 GOPCQ9HD26 462 aa10.54□□□□□ -0.72
TNIK-213ENST00000487846 NCKAP5LQ9HCH0 1330 aa10.54□□□□□ -0.72
TNIK-213ENST00000487846 PLEKHG3A1L390 1219 aa10.52□□□□□ -0.73
TNIK-213ENST00000487846 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.73
TNIK-213ENST00000487846 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
TNIK-213ENST00000487846 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
TNIK-213ENST00000487846 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
TNIK-213ENST00000487846 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
TNIK-213ENST00000487846 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
TNIK-213ENST00000487846 MLLT3P42568 568 aaPredicted RBP10.49□□□□□ -0.73
TNIK-213ENST00000487846 CLUAP1Q96AJ1 413 aa10.49□□□□□ -0.73
TNIK-213ENST00000487846 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
TNIK-213ENST00000487846 C3orf67Q6ZVT6 689 aa10.48□□□□□ -0.73
TNIK-213ENST00000487846 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
TNIK-213ENST00000487846 SERPINA10Q9UK55 444 aa10.48□□□□□ -0.73
TNIK-213ENST00000487846 TMCO4Q5TGY1 634 aa10.47□□□□□ -0.73
TNIK-213ENST00000487846 AEBP1Q8IUX7 1158 aa10.47□□□□□ -0.73
TNIK-213ENST00000487846 MICALL2Q8IY33 904 aa10.47□□□□□ -0.73
TNIK-213ENST00000487846 MINK1Q8N4C8 1332 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms