RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 KIF3CO14782 793 aa11.22□□□□□ -0.61
RBM39-234ENST00000487604 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
RBM39-234ENST00000487604 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
RBM39-234ENST00000487604 C2orf72A6NCS6 295 aa11.21□□□□□ -0.61
RBM39-234ENST00000487604 EMP3P54852 163 aa11.2□□□□□ -0.62
RBM39-234ENST00000487604 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
RBM39-234ENST00000487604 POTEB3A0JP26 581 aa11.16□□□□□ -0.62
RBM39-234ENST00000487604 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
RBM39-234ENST00000487604 POTEBQ6S5H4 581 aa11.16□□□□□ -0.62
RBM39-234ENST00000487604 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
RBM39-234ENST00000487604 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
RBM39-234ENST00000487604 RYDENQ9NUL5 291 aaKnown RBP11.16□□□□□ -0.62
RBM39-234ENST00000487604 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
RBM39-234ENST00000487604 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
RBM39-234ENST00000487604 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
RBM39-234ENST00000487604 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
RBM39-234ENST00000487604 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
RBM39-234ENST00000487604 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
RBM39-234ENST00000487604 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
RBM39-234ENST00000487604 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
RBM39-234ENST00000487604 GPHNQ9NQX3 736 aaPredicted RBP11.09□□□□□ -0.63
RBM39-234ENST00000487604 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.649e-12■■■□□ 15.2
RBM39-234ENST00000487604 ERBB3P21860 1342 aa11.07□□□□□ -0.64
RBM39-234ENST00000487604 SLC34A2O95436 690 aa11.06□□□□□ -0.64
RBM39-234ENST00000487604 FOXK1P85037 733 aa11.05□□□□□ -0.64
RBM39-234ENST00000487604 DSG2Q14126 1118 aa11.04□□□□□ -0.64
RBM39-234ENST00000487604 PLPP6Q8IY26 295 aa11.03□□□□□ -0.64
RBM39-234ENST00000487604 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
RBM39-234ENST00000487604 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
RBM39-234ENST00000487604 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
RBM39-234ENST00000487604 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
RBM39-234ENST00000487604 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
RBM39-234ENST00000487604 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
RBM39-234ENST00000487604 NCKAP5LQ9HCH0 1330 aa10.99□□□□□ -0.65
RBM39-234ENST00000487604 NUDT7P0C024 238 aa10.98□□□□□ -0.65
RBM39-234ENST00000487604 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
RBM39-234ENST00000487604 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
RBM39-234ENST00000487604 PDE4AP27815 886 aa10.96□□□□□ -0.65
RBM39-234ENST00000487604 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
RBM39-234ENST00000487604 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
RBM39-234ENST00000487604 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
RBM39-234ENST00000487604 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
RBM39-234ENST00000487604 PPP1R15BQ5SWA1 713 aa10.92□□□□□ -0.66
RBM39-234ENST00000487604 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
RBM39-234ENST00000487604 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
RBM39-234ENST00000487604 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
RBM39-234ENST00000487604 TBC1D12O60347 775 aa10.88□□□□□ -0.67
RBM39-234ENST00000487604 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
RBM39-234ENST00000487604 MFSD10Q14728 455 aa10.87□□□□□ -0.67
RBM39-234ENST00000487604 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
RBM39-234ENST00000487604 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
RBM39-234ENST00000487604 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
RBM39-234ENST00000487604 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
RBM39-234ENST00000487604 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
RBM39-234ENST00000487604 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
RBM39-234ENST00000487604 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
RBM39-234ENST00000487604 PBX2P40425 430 aa10.78□□□□□ -0.68
RBM39-234ENST00000487604 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
RBM39-234ENST00000487604 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
RBM39-234ENST00000487604 EMILIN3Q9NT22 766 aa10.78□□□□□ -0.68
RBM39-234ENST00000487604 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
RBM39-234ENST00000487604 LSM11P83369 360 aaKnown RBP eCLIP10.77□□□□□ -0.691e-13■□□□□ 8.6
RBM39-234ENST00000487604 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
RBM39-234ENST00000487604 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
RBM39-234ENST00000487604 EVI5O60447 810 aa10.73□□□□□ -0.69
RBM39-234ENST00000487604 MAP3K9P80192 1104 aa10.73□□□□□ -0.69
RBM39-234ENST00000487604 CAMK2BQ13554 666 aa10.73□□□□□ -0.69
RBM39-234ENST00000487604 PPP4R3BQ5MIZ7 849 aa10.73□□□□□ -0.69
RBM39-234ENST00000487604 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
RBM39-234ENST00000487604 PSEN2P49810 448 aa10.69□□□□□ -0.7
RBM39-234ENST00000487604 FOSBP53539 338 aa10.69□□□□□ -0.7
RBM39-234ENST00000487604 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
RBM39-234ENST00000487604 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
RBM39-234ENST00000487604 PTGER2P43116 358 aa10.66□□□□□ -0.7
RBM39-234ENST00000487604 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
RBM39-234ENST00000487604 JPH4Q96JJ6 628 aa10.65□□□□□ -0.7
RBM39-234ENST00000487604 DPYSL4O14531 572 aa10.64□□□□□ -0.71
RBM39-234ENST00000487604 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
RBM39-234ENST00000487604 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
RBM39-234ENST00000487604 BCL2L12Q9HB09 334 aa10.64□□□□□ -0.71
RBM39-234ENST00000487604 TK2O00142 265 aa10.61□□□□□ -0.71
RBM39-234ENST00000487604 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
RBM39-234ENST00000487604 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
RBM39-234ENST00000487604 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
RBM39-234ENST00000487604 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
RBM39-234ENST00000487604 E2F4Q16254 413 aa10.59□□□□□ -0.71
RBM39-234ENST00000487604 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
RBM39-234ENST00000487604 HRO43593 1189 aa10.58□□□□□ -0.72
RBM39-234ENST00000487604 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
RBM39-234ENST00000487604 PTPREP23469 700 aa10.57□□□□□ -0.72
RBM39-234ENST00000487604 VPS9D1Q9Y2B5 631 aa10.57□□□□□ -0.72
RBM39-234ENST00000487604 PHF14O94880 888 aa10.56□□□□□ -0.72
RBM39-234ENST00000487604 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
RBM39-234ENST00000487604 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
RBM39-234ENST00000487604 SLC4A5Q9BY07 1137 aa10.54□□□□□ -0.72
RBM39-234ENST00000487604 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
RBM39-234ENST00000487604 PDIA6Q15084 440 aa10.52□□□□□ -0.73
RBM39-234ENST00000487604 DDX12PQ92771 950 aa10.52□□□□□ -0.73
RBM39-234ENST00000487604 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
RBM39-234ENST00000487604 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms