RNA–Protein interactions for RNA: ENST00000487600.1

NKRF-203, Transcript of NFKB repressing factor, humanhuman

TSL 5

Gene NKRF, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-203ENST00000487600 TMEM92Q6UXU6 159 aa16.51■□□□□ 0.23
NKRF-203ENST00000487600 HS3ST6Q96QI5 342 aa16.5■□□□□ 0.23
NKRF-203ENST00000487600 ZSWIM6Q9HCJ5 1215 aa16.46■□□□□ 0.23
NKRF-203ENST00000487600 ERBB3P21860 1342 aa16.43■□□□□ 0.22
NKRF-203ENST00000487600 POTEB3A0JP26 581 aa16.42■□□□□ 0.22
NKRF-203ENST00000487600 POTEBQ6S5H4 581 aa16.42■□□□□ 0.22
NKRF-203ENST00000487600 SPNS2Q8IVW8 549 aa16.37■□□□□ 0.21
NKRF-203ENST00000487600 HS6ST3Q8IZP7 471 aa16.36■□□□□ 0.21
NKRF-203ENST00000487600 MMRN1Q13201 1228 aa16.33■□□□□ 0.2
NKRF-203ENST00000487600 TMC2Q8TDI7 906 aa16.33■□□□□ 0.2
NKRF-203ENST00000487600 CHGAP10645 457 aaKnown RBP16.31■□□□□ 0.2
NKRF-203ENST00000487600 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
NKRF-203ENST00000487600 C2orf72A6NCS6 295 aa16.3■□□□□ 0.2
NKRF-203ENST00000487600 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
NKRF-203ENST00000487600 KRTAP3-3Q9BYR6 98 aa16.29■□□□□ 0.2
NKRF-203ENST00000487600 KRTAP3-2Q9BYR7 98 aa16.29■□□□□ 0.2
NKRF-203ENST00000487600 KIF3CO14782 793 aa16.27■□□□□ 0.2
NKRF-203ENST00000487600 ARSIQ5FYB1 569 aa16.26■□□□□ 0.19
NKRF-203ENST00000487600 PPP1R37O75864 691 aa16.25■□□□□ 0.19
NKRF-203ENST00000487600 RYDENQ9NUL5 291 aaKnown RBP16.21■□□□□ 0.19
NKRF-203ENST00000487600 ZNF687Q8N1G0 1237 aa16.18■□□□□ 0.18
NKRF-203ENST00000487600 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
NKRF-203ENST00000487600 SLC34A2O95436 690 aa16.15■□□□□ 0.18
NKRF-203ENST00000487600 KHSRPQ92945 711 aaKnown RBP eCLIP16.14■□□□□ 0.17
NKRF-203ENST00000487600 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
NKRF-203ENST00000487600 PCDHGA4Q9Y5G9 962 aa16.11■□□□□ 0.17
NKRF-203ENST00000487600 NUDT7P0C024 238 aa16.09■□□□□ 0.17
NKRF-203ENST00000487600 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
NKRF-203ENST00000487600 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
NKRF-203ENST00000487600 FOXK1P85037 733 aa16.04■□□□□ 0.16
NKRF-203ENST00000487600 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
NKRF-203ENST00000487600 PLPP6Q8IY26 295 aa16.02■□□□□ 0.16
NKRF-203ENST00000487600 LHX6Q9UPM6 363 aa16■□□□□ 0.15
NKRF-203ENST00000487600 TBC1D12O60347 775 aa15.99■□□□□ 0.15
NKRF-203ENST00000487600 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
NKRF-203ENST00000487600 PTGER2P43116 358 aa15.97■□□□□ 0.15
NKRF-203ENST00000487600 PTCD2Q8WV60 388 aaKnown RBP15.97■□□□□ 0.15
NKRF-203ENST00000487600 PBX2P40425 430 aa15.96■□□□□ 0.15
NKRF-203ENST00000487600 ANKRD13DQ6ZTN6 518 aa15.96■□□□□ 0.15
NKRF-203ENST00000487600 DSG2Q14126 1118 aa15.95■□□□□ 0.14
NKRF-203ENST00000487600 RNF166Q96A37 237 aaPredicted RBP15.94■□□□□ 0.14
NKRF-203ENST00000487600 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
NKRF-203ENST00000487600 LSM11P83369 360 aaKnown RBP eCLIP15.91■□□□□ 0.14
NKRF-203ENST00000487600 PDE4AP27815 886 aa15.88■□□□□ 0.13
NKRF-203ENST00000487600 GTPBP6O43824 516 aaPredicted RBP15.85■□□□□ 0.13
NKRF-203ENST00000487600 CRISPLD2Q9H0B8 497 aa15.85■□□□□ 0.13
NKRF-203ENST00000487600 PPP1R15BQ5SWA1 713 aa15.83■□□□□ 0.12
NKRF-203ENST00000487600 AXIN2Q9Y2T1 843 aa15.82■□□□□ 0.12
NKRF-203ENST00000487600 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
NKRF-203ENST00000487600 ARHGAP33O14559 1287 aa15.81■□□□□ 0.12
NKRF-203ENST00000487600 PPP4R3BQ5MIZ7 849 aa15.81■□□□□ 0.12
NKRF-203ENST00000487600 UPF1Q92900 1129 aaKnown RBP eCLIP15.79■□□□□ 0.12
NKRF-203ENST00000487600 OXER1Q8TDS5 423 aa15.77■□□□□ 0.12
NKRF-203ENST00000487600 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
NKRF-203ENST00000487600 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
NKRF-203ENST00000487600 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
NKRF-203ENST00000487600 LARP6Q9BRS8 491 aaKnown RBP15.74■□□□□ 0.11
NKRF-203ENST00000487600 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
NKRF-203ENST00000487600 ADGRD1Q6QNK2 874 aa15.69■□□□□ 0.1
NKRF-203ENST00000487600 TK2O00142 265 aa15.66■□□□□ 0.1
NKRF-203ENST00000487600 ZNF454Q8N9F8 522 aa15.65■□□□□ 0.1
NKRF-203ENST00000487600 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
NKRF-203ENST00000487600 PSEN2P49810 448 aa15.64■□□□□ 0.09
NKRF-203ENST00000487600 MFSD10Q14728 455 aa15.63■□□□□ 0.09
NKRF-203ENST00000487600 MAP3K9P80192 1104 aa15.62■□□□□ 0.09
NKRF-203ENST00000487600 KCNK17Q96T54 332 aa15.62■□□□□ 0.09
NKRF-203ENST00000487600 DMRTA1Q5VZB9 504 aa15.61■□□□□ 0.09
NKRF-203ENST00000487600 BBXQ8WY36 941 aaPredicted RBP15.6■□□□□ 0.09
NKRF-203ENST00000487600 EVI5O60447 810 aa15.59■□□□□ 0.09
NKRF-203ENST00000487600 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
NKRF-203ENST00000487600 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
NKRF-203ENST00000487600 FOSBP53539 338 aa15.55■□□□□ 0.08
NKRF-203ENST00000487600 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
NKRF-203ENST00000487600 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
NKRF-203ENST00000487600 HCSTQ9UBK5 93 aa15.54■□□□□ 0.08
NKRF-203ENST00000487600 PTPREP23469 700 aa15.53■□□□□ 0.08
NKRF-203ENST00000487600 HRO43593 1189 aa15.52■□□□□ 0.08
NKRF-203ENST00000487600 CADPS2Q86UW7 1296 aa15.52■□□□□ 0.08
NKRF-203ENST00000487600 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.51■□□□□ 0.07
NKRF-203ENST00000487600 ZDHHC16Q969W1 377 aa15.5■□□□□ 0.07
NKRF-203ENST00000487600 EMILIN3Q9NT22 766 aa15.48■□□□□ 0.07
NKRF-203ENST00000487600 VPS9D1Q9Y2B5 631 aa15.47■□□□□ 0.07
NKRF-203ENST00000487600 SLC4A5Q9BY07 1137 aa15.46■□□□□ 0.07
NKRF-203ENST00000487600 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
NKRF-203ENST00000487600 KCTD12Q96CX2 325 aaKnown RBP15.43■□□□□ 0.06
NKRF-203ENST00000487600 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
NKRF-203ENST00000487600 GOLGA8CPA6NN73 597 aa15.38■□□□□ 0.05
NKRF-203ENST00000487600 CAMK2BQ13554 666 aa15.38■□□□□ 0.05
NKRF-203ENST00000487600 FBXW7Q969H0 707 aa15.38■□□□□ 0.05
NKRF-203ENST00000487600 PHF14O94880 888 aa15.37■□□□□ 0.05
NKRF-203ENST00000487600 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
NKRF-203ENST00000487600 ZBED2Q9BTP6 218 aa15.37■□□□□ 0.05
NKRF-203ENST00000487600 PLA2G2EQ9NZK7 142 aa15.36■□□□□ 0.05
NKRF-203ENST00000487600 PCDHGA10Q9Y5H3 936 aa15.36■□□□□ 0.05
NKRF-203ENST00000487600 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
NKRF-203ENST00000487600 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
NKRF-203ENST00000487600 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
NKRF-203ENST00000487600 DPYSL4O14531 572 aa15.33■□□□□ 0.04
NKRF-203ENST00000487600 MRPL50Q8N5N7 158 aaKnown RBP15.33■□□□□ 0.04
NKRF-203ENST00000487600 EPAS1Q99814 870 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms