RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
RAD50-207ENST00000487596 EMP3P54852 163 aa13.1□□□□□ -0.31
RAD50-207ENST00000487596 KIF3CO14782 793 aa13.09□□□□□ -0.31
RAD50-207ENST00000487596 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
RAD50-207ENST00000487596 CDAN1Q8IWY9 1227 aa13.09□□□□□ -0.31
RAD50-207ENST00000487596 PPP1R37O75864 691 aa13.08□□□□□ -0.32
RAD50-207ENST00000487596 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
RAD50-207ENST00000487596 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
RAD50-207ENST00000487596 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
RAD50-207ENST00000487596 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
RAD50-207ENST00000487596 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
RAD50-207ENST00000487596 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
RAD50-207ENST00000487596 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
RAD50-207ENST00000487596 SLC34A2O95436 690 aa12.97□□□□□ -0.33
RAD50-207ENST00000487596 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
RAD50-207ENST00000487596 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
RAD50-207ENST00000487596 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
RAD50-207ENST00000487596 ERBB3P21860 1342 aa12.94□□□□□ -0.34
RAD50-207ENST00000487596 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
RAD50-207ENST00000487596 FOXK1P85037 733 aa12.92□□□□□ -0.34
RAD50-207ENST00000487596 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
RAD50-207ENST00000487596 POTEB3A0JP26 581 aa12.87□□□□□ -0.35
RAD50-207ENST00000487596 POTEBQ6S5H4 581 aa12.87□□□□□ -0.35
RAD50-207ENST00000487596 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
RAD50-207ENST00000487596 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
RAD50-207ENST00000487596 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
RAD50-207ENST00000487596 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
RAD50-207ENST00000487596 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
RAD50-207ENST00000487596 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
RAD50-207ENST00000487596 PDE4AP27815 886 aa12.83□□□□□ -0.36
RAD50-207ENST00000487596 PTCD2Q8WV60 388 aaKnown RBP12.83□□□□□ -0.36
RAD50-207ENST00000487596 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
RAD50-207ENST00000487596 DSG2Q14126 1118 aa12.82□□□□□ -0.36
RAD50-207ENST00000487596 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
RAD50-207ENST00000487596 TBC1D12O60347 775 aa12.8□□□□□ -0.36
RAD50-207ENST00000487596 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
RAD50-207ENST00000487596 KRTAP3-2Q9BYR7 98 aa12.8□□□□□ -0.36
RAD50-207ENST00000487596 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.363e-9■■■■□ 22.6
RAD50-207ENST00000487596 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
RAD50-207ENST00000487596 NUDT7P0C024 238 aa12.77□□□□□ -0.37
RAD50-207ENST00000487596 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
RAD50-207ENST00000487596 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
RAD50-207ENST00000487596 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
RAD50-207ENST00000487596 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
RAD50-207ENST00000487596 LHX6Q9UPM6 363 aa12.72□□□□□ -0.37
RAD50-207ENST00000487596 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
RAD50-207ENST00000487596 PBX2P40425 430 aa12.71□□□□□ -0.37
RAD50-207ENST00000487596 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
RAD50-207ENST00000487596 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
RAD50-207ENST00000487596 MFSD10Q14728 455 aa12.69□□□□□ -0.38
RAD50-207ENST00000487596 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
RAD50-207ENST00000487596 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
RAD50-207ENST00000487596 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
RAD50-207ENST00000487596 PTGER2P43116 358 aa12.63□□□□□ -0.39
RAD50-207ENST00000487596 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
RAD50-207ENST00000487596 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
RAD50-207ENST00000487596 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAD50-207ENST00000487596 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
RAD50-207ENST00000487596 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
RAD50-207ENST00000487596 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
RAD50-207ENST00000487596 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
RAD50-207ENST00000487596 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
RAD50-207ENST00000487596 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
RAD50-207ENST00000487596 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
RAD50-207ENST00000487596 EVI5O60447 810 aa12.52□□□□□ -0.41
RAD50-207ENST00000487596 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
RAD50-207ENST00000487596 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
RAD50-207ENST00000487596 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
RAD50-207ENST00000487596 CFAP44Q96MT7 982 aa12.5□□□□□ -0.41
RAD50-207ENST00000487596 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
RAD50-207ENST00000487596 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
RAD50-207ENST00000487596 TK2O00142 265 aa12.48□□□□□ -0.41
RAD50-207ENST00000487596 FOSBP53539 338 aa12.48□□□□□ -0.41
RAD50-207ENST00000487596 ZNF454Q8N9F8 522 aa12.48□□□□□ -0.41
RAD50-207ENST00000487596 AXIN2Q9Y2T1 843 aa12.48□□□□□ -0.41
RAD50-207ENST00000487596 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
RAD50-207ENST00000487596 BCL2L12Q9HB09 334 aa12.45□□□□□ -0.42
RAD50-207ENST00000487596 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
RAD50-207ENST00000487596 ZDHHC16Q969W1 377 aa12.42□□□□□ -0.42
RAD50-207ENST00000487596 WDR70Q9NW82 654 aa12.41□□□□□ -0.42
RAD50-207ENST00000487596 PSEN2P49810 448 aa12.4□□□□□ -0.42
RAD50-207ENST00000487596 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
RAD50-207ENST00000487596 PTPREP23469 700 aa12.39□□□□□ -0.43
RAD50-207ENST00000487596 SLC4A5Q9BY07 1137 aa12.39□□□□□ -0.43
RAD50-207ENST00000487596 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
RAD50-207ENST00000487596 PHF14O94880 888 aa12.37□□□□□ -0.43
RAD50-207ENST00000487596 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
RAD50-207ENST00000487596 DPYSL4O14531 572 aa12.36□□□□□ -0.43
RAD50-207ENST00000487596 E2F4Q16254 413 aa12.36□□□□□ -0.43
RAD50-207ENST00000487596 ARIH1Q9Y4X5 557 aaPredicted RBP12.36□□□□□ -0.43
RAD50-207ENST00000487596 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
RAD50-207ENST00000487596 HRO43593 1189 aa12.34□□□□□ -0.43
RAD50-207ENST00000487596 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
RAD50-207ENST00000487596 EPAS1Q99814 870 aa12.34□□□□□ -0.43
RAD50-207ENST00000487596 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
RAD50-207ENST00000487596 STAC3Q96MF2 364 aa12.33□□□□□ -0.44
RAD50-207ENST00000487596 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
RAD50-207ENST00000487596 VPS9D1Q9Y2B5 631 aa12.32□□□□□ -0.44
RAD50-207ENST00000487596 PDIA6Q15084 440 aa12.3□□□□□ -0.44
RAD50-207ENST00000487596 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms