RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 AKNAQ7Z591 1439 aa30.64■■■□□ 2.5
SEC22A-208ENST00000487572 SUPT6HQ7KZ85 1726 aaKnown RBP30.64■■■□□ 2.5
SEC22A-208ENST00000487572 EFCAB2Q5VUJ9 269 aa30.64■■■□□ 2.5
SEC22A-208ENST00000487572 NCOA2Q15596 1464 aa30.63■■■□□ 2.49
SEC22A-208ENST00000487572 CDC42BPAQ5VT25 1732 aa30.63■■■□□ 2.49
SEC22A-208ENST00000487572 GPATCH8Q9UKJ3 1502 aaKnown RBP30.62■■■□□ 2.49
SEC22A-208ENST00000487572 CDC42BPBQ9Y5S2 1711 aa30.61■■■□□ 2.49
SEC22A-208ENST00000487572 ADGRL1O94910 1474 aa30.57■■■□□ 2.48
SEC22A-208ENST00000487572 ZNF777Q9ULD5 760 aaPredicted RBP30.55■■■□□ 2.48
SEC22A-208ENST00000487572 RAPGEF3O95398 923 aa30.54■■■□□ 2.48
SEC22A-208ENST00000487572 CFDP1Q9UEE9 299 aaPredicted RBP30.54■■■□□ 2.48
SEC22A-208ENST00000487572 DENND4BO75064 1496 aaPredicted RBP30.52■■■□□ 2.48
SEC22A-208ENST00000487572 SCAPERQ9BY12 1400 aa30.52■■■□□ 2.48
SEC22A-208ENST00000487572 ITSN2Q9NZM3 1697 aa30.52■■■□□ 2.48
SEC22A-208ENST00000487572 FRMPD1Q5SYB0 1578 aa30.47■■■□□ 2.47
SEC22A-208ENST00000487572 SAMD9LQ8IVG5 1584 aa30.46■■■□□ 2.47
SEC22A-208ENST00000487572 ABCC1P33527 1531 aa30.45■■■□□ 2.47
SEC22A-208ENST00000487572 POGZQ7Z3K3 1410 aa30.44■■■□□ 2.46
SEC22A-208ENST00000487572 RICTORQ6R327 1708 aa30.43■■■□□ 2.46
SEC22A-208ENST00000487572 PPARGC1BQ86YN6 1023 aaKnown RBP30.43■■■□□ 2.46
SEC22A-208ENST00000487572 ZNF644Q9H582 1327 aaPredicted RBP30.41■■■□□ 2.46
SEC22A-208ENST00000487572 ARHGEF12Q9NZN5 1544 aa30.4■■■□□ 2.46
SEC22A-208ENST00000487572 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.46
SEC22A-208ENST00000487572 SYCP2Q9BX26 1530 aa30.38■■■□□ 2.45
SEC22A-208ENST00000487572 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
SEC22A-208ENST00000487572 HNRNPMP52272 730 aaKnown RBP eCLIP30.36■■■□□ 2.451e-9■■■■■ 33.1
SEC22A-208ENST00000487572 AFAP1Q8N556 730 aa30.36■■■□□ 2.45
SEC22A-208ENST00000487572 TRAPPC8Q9Y2L5 1435 aa30.36■■■□□ 2.45
SEC22A-208ENST00000487572 ZNF518AQ6AHZ1 1483 aa30.36■■■□□ 2.45
SEC22A-208ENST00000487572 CAMSAP2Q08AD1 1489 aa30.34■■■□□ 2.45
SEC22A-208ENST00000487572 ZMYM4Q5VZL5 1548 aa30.32■■■□□ 2.44
SEC22A-208ENST00000487572 KIAA1107Q9UPP5 1409 aa30.32■■■□□ 2.44
SEC22A-208ENST00000487572 MIA2Q96PC5 1412 aa30.3■■■□□ 2.44
SEC22A-208ENST00000487572 MYT1LQ9UL68 1186 aa30.29■■■□□ 2.44
SEC22A-208ENST00000487572 KDM5CP41229 1560 aa30.28■■■□□ 2.44
SEC22A-208ENST00000487572 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
SEC22A-208ENST00000487572 FGD6Q6ZV73 1430 aa30.25■■■□□ 2.43
SEC22A-208ENST00000487572 YEATS2Q9ULM3 1422 aa30.25■■■□□ 2.43
SEC22A-208ENST00000487572 ARHGEF40Q8TER5 1519 aa30.25■■■□□ 2.43
SEC22A-208ENST00000487572 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
SEC22A-208ENST00000487572 MBD5Q9P267 1494 aa30.24■■■□□ 2.43
SEC22A-208ENST00000487572 HECW2Q9P2P5 1572 aa30.24■■■□□ 2.43
SEC22A-208ENST00000487572 PTPN23Q9H3S7 1636 aa30.22■■■□□ 2.43
SEC22A-208ENST00000487572 SPAG9O60271 1321 aaKnown RBP30.2■■■□□ 2.42
SEC22A-208ENST00000487572 MLH3Q9UHC1 1453 aa30.19■■■□□ 2.42
SEC22A-208ENST00000487572 CCDC141Q6ZP82 1450 aa30.18■■■□□ 2.42
SEC22A-208ENST00000487572 ARHGEF5Q12774 1597 aa30.15■■■□□ 2.42
SEC22A-208ENST00000487572 TCOF1Q13428 1488 aaKnown RBP30.14■■■□□ 2.42
SEC22A-208ENST00000487572 RSPH4AQ5TD94 716 aa30.13■■■□□ 2.41
SEC22A-208ENST00000487572 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
SEC22A-208ENST00000487572 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
SEC22A-208ENST00000487572 ABCA6Q8N139 1617 aa30.12■■■□□ 2.41
SEC22A-208ENST00000487572 FAM50AQ14320 339 aaKnown RBP30.12■■■□□ 2.41
SEC22A-208ENST00000487572 ATP10AO60312 1499 aa30.12■■■□□ 2.41
SEC22A-208ENST00000487572 INO80Q9ULG1 1556 aaPredicted RBP30.11■■■□□ 2.41
SEC22A-208ENST00000487572 DIP2CQ9Y2E4 1556 aa30.11■■■□□ 2.41
SEC22A-208ENST00000487572 ARID4BQ4LE39 1312 aaPredicted RBP30.11■■■□□ 2.41
SEC22A-208ENST00000487572 C9orf84Q5VXU9 1444 aa30.08■■■□□ 2.41
SEC22A-208ENST00000487572 TSPY4P0CV99 314 aa30.07■■■□□ 2.4
SEC22A-208ENST00000487572 TSPY10P0CW01 314 aa30.07■■■□□ 2.4
SEC22A-208ENST00000487572 RTEL1-TNFRSF6BF6WH68 1400 aa30.04■■■□□ 2.4
SEC22A-208ENST00000487572 SIGLEC1Q9BZZ2 1709 aa30.03■■■□□ 2.4
SEC22A-208ENST00000487572 ABCC5O15440 1437 aa30.03■■■□□ 2.4
SEC22A-208ENST00000487572 DNMT1P26358 1616 aaKnown RBP30.02■■■□□ 2.4
SEC22A-208ENST00000487572 DAPK1P53355 1430 aa30.02■■■□□ 2.4
SEC22A-208ENST00000487572 MAST1Q9Y2H9 1570 aa29.98■■■□□ 2.39
SEC22A-208ENST00000487572 CROCC2H7BZ55 1655 aa29.98■■■□□ 2.39
SEC22A-208ENST00000487572 REREQ9P2R6 1566 aa29.97■■■□□ 2.39
SEC22A-208ENST00000487572 KDM4FA0A1W2PPD8 638 aa29.96■■■□□ 2.39
SEC22A-208ENST00000487572 A2MP01023 1474 aa29.95■■■□□ 2.39
SEC22A-208ENST00000487572 SHANK2Q9UPX8 1470 aa29.95■■■□□ 2.39
SEC22A-208ENST00000487572 MLECQ14165 292 aa29.95■■■□□ 2.39
SEC22A-208ENST00000487572 ADGBQ8N7X0 1667 aa29.94■■■□□ 2.38
SEC22A-208ENST00000487572 CHIC2Q9UKJ5 165 aa29.93■■■□□ 2.38
SEC22A-208ENST00000487572 BCORL1Q5H9F3 1711 aa29.92■■■□□ 2.38
SEC22A-208ENST00000487572 RRBP1Q9P2E9 1410 aaKnown RBP29.92■■■□□ 2.38
SEC22A-208ENST00000487572 ITGAEP38570 1179 aa29.9■■■□□ 2.38
SEC22A-208ENST00000487572 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
SEC22A-208ENST00000487572 AGLP35573 1532 aa29.88■■■□□ 2.37
SEC22A-208ENST00000487572 DHX29Q7Z478 1369 aaKnown RBP29.87■■■□□ 2.37
SEC22A-208ENST00000487572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.87■■■□□ 2.37
SEC22A-208ENST00000487572 RRP7BPQ9NSQ0 103 aa29.85■■■□□ 2.37
SEC22A-208ENST00000487572 ADAMTSL3P82987 1691 aa29.85■■■□□ 2.37
SEC22A-208ENST00000487572 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
SEC22A-208ENST00000487572 KIF15Q9NS87 1388 aa29.83■■■□□ 2.37
SEC22A-208ENST00000487572 MADDQ8WXG6 1647 aa29.82■■■□□ 2.36
SEC22A-208ENST00000487572 ANKRD30AQ9BXX3 1397 aa29.82■■■□□ 2.36
SEC22A-208ENST00000487572 DUOX2Q9NRD8 1548 aa29.78■■■□□ 2.36
SEC22A-208ENST00000487572 ADGRL2O95490 1459 aa29.78■■■□□ 2.36
SEC22A-208ENST00000487572 NCOA1Q15788 1441 aa29.78■■■□□ 2.36
SEC22A-208ENST00000487572 KIF3BO15066 747 aa29.77■■■□□ 2.36
SEC22A-208ENST00000487572 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
SEC22A-208ENST00000487572 GGT6Q6P531 493 aa29.76■■■□□ 2.35
SEC22A-208ENST00000487572 RIMS1Q86UR5 1692 aaKnown RBP29.75■■■□□ 2.35
SEC22A-208ENST00000487572 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
SEC22A-208ENST00000487572 ESF1Q9H501 851 aaKnown RBP29.71■■■□□ 2.35
SEC22A-208ENST00000487572 PTPRMP28827 1452 aa29.69■■■□□ 2.34
SEC22A-208ENST00000487572 PLPPR3Q6T4P5 718 aa29.69■■■□□ 2.34
SEC22A-208ENST00000487572 ERBINQ96RT1 1412 aa29.69■■■□□ 2.34
SEC22A-208ENST00000487572 ROCK1Q13464 1354 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms