RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 RGL2O15211 777 aa13.75□□□□□ -0.21
CUL3-211ENST00000487558 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
CUL3-211ENST00000487558 STK25O00506 426 aa13.74□□□□□ -0.21
CUL3-211ENST00000487558 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
CUL3-211ENST00000487558 HOXB1P14653 301 aaPredicted RBP13.74□□□□□ -0.21
CUL3-211ENST00000487558 MFRPQ9BY79 579 aa13.74□□□□□ -0.21
CUL3-211ENST00000487558 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
CUL3-211ENST00000487558 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
CUL3-211ENST00000487558 KRTAP3-3Q9BYR6 98 aa13.68□□□□□ -0.22
CUL3-211ENST00000487558 KRTAP3-2Q9BYR7 98 aa13.68□□□□□ -0.22
CUL3-211ENST00000487558 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
CUL3-211ENST00000487558 RIMBP2O15034 1052 aa13.65□□□□□ -0.22
CUL3-211ENST00000487558 MMRN1Q13201 1228 aa13.65□□□□□ -0.22
CUL3-211ENST00000487558 ZSWIM6Q9HCJ5 1215 aa13.64□□□□□ -0.23
CUL3-211ENST00000487558 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
CUL3-211ENST00000487558 ERBB3P21860 1342 aa13.6□□□□□ -0.23
CUL3-211ENST00000487558 KIF3CO14782 793 aa13.57□□□□□ -0.24
CUL3-211ENST00000487558 VARS2Q5ST30 1063 aaKnown RBP13.53□□□□□ -0.24
CUL3-211ENST00000487558 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
CUL3-211ENST00000487558 ARSIQ5FYB1 569 aa13.52□□□□□ -0.25
CUL3-211ENST00000487558 PPP1R37O75864 691 aa13.5□□□□□ -0.25
CUL3-211ENST00000487558 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
CUL3-211ENST00000487558 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
CUL3-211ENST00000487558 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
CUL3-211ENST00000487558 KHSRPQ92945 711 aaKnown RBP eCLIP13.46□□□□□ -0.254e-10■■■□□ 16
CUL3-211ENST00000487558 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.45□□□□□ -0.26
CUL3-211ENST00000487558 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
CUL3-211ENST00000487558 SLC34A2O95436 690 aa13.42□□□□□ -0.26
CUL3-211ENST00000487558 TMC2Q8TDI7 906 aa13.42□□□□□ -0.26
CUL3-211ENST00000487558 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
CUL3-211ENST00000487558 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
CUL3-211ENST00000487558 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
CUL3-211ENST00000487558 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
CUL3-211ENST00000487558 NUDT7P0C024 238 aa13.34□□□□□ -0.27
CUL3-211ENST00000487558 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
CUL3-211ENST00000487558 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
CUL3-211ENST00000487558 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
CUL3-211ENST00000487558 LHX6Q9UPM6 363 aa13.29□□□□□ -0.28
CUL3-211ENST00000487558 FOXK1P85037 733 aa13.28□□□□□ -0.28
CUL3-211ENST00000487558 GPHNQ9NQX3 736 aaPredicted RBP13.28□□□□□ -0.28
CUL3-211ENST00000487558 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
CUL3-211ENST00000487558 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
CUL3-211ENST00000487558 PTCD2Q8WV60 388 aaKnown RBP13.26□□□□□ -0.29
CUL3-211ENST00000487558 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
CUL3-211ENST00000487558 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
CUL3-211ENST00000487558 PLPP6Q8IY26 295 aa13.24□□□□□ -0.29
CUL3-211ENST00000487558 LSM11P83369 360 aaKnown RBP eCLIP13.23□□□□□ -0.29
CUL3-211ENST00000487558 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
CUL3-211ENST00000487558 SPRYD3Q8NCJ5 442 aa13.23□□□□□ -0.29
CUL3-211ENST00000487558 PBX2P40425 430 aa13.22□□□□□ -0.29
CUL3-211ENST00000487558 DSG2Q14126 1118 aa13.22□□□□□ -0.29
CUL3-211ENST00000487558 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
CUL3-211ENST00000487558 PTGER2P43116 358 aa13.21□□□□□ -0.29
CUL3-211ENST00000487558 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
CUL3-211ENST00000487558 BCANQ96GW7 911 aa13.17□□□□□ -0.3
CUL3-211ENST00000487558 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
CUL3-211ENST00000487558 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
CUL3-211ENST00000487558 CRISPLD2Q9H0B8 497 aa13.14□□□□□ -0.31
CUL3-211ENST00000487558 TBC1D12O60347 775 aa13.11□□□□□ -0.31
CUL3-211ENST00000487558 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
CUL3-211ENST00000487558 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
CUL3-211ENST00000487558 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
CUL3-211ENST00000487558 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
CUL3-211ENST00000487558 NCKAP5LQ9HCH0 1330 aa13.07□□□□□ -0.32
CUL3-211ENST00000487558 PPP1R15BQ5SWA1 713 aa13.04□□□□□ -0.32
CUL3-211ENST00000487558 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
CUL3-211ENST00000487558 PDE4AP27815 886 aa13.03□□□□□ -0.32
CUL3-211ENST00000487558 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
CUL3-211ENST00000487558 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
CUL3-211ENST00000487558 PSEN2P49810 448 aa13.01□□□□□ -0.33
CUL3-211ENST00000487558 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
CUL3-211ENST00000487558 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
CUL3-211ENST00000487558 TK2O00142 265 aa13□□□□□ -0.33
CUL3-211ENST00000487558 HRO43593 1189 aa12.97□□□□□ -0.33
CUL3-211ENST00000487558 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
CUL3-211ENST00000487558 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
CUL3-211ENST00000487558 MFSD10Q14728 455 aa12.93□□□□□ -0.34
CUL3-211ENST00000487558 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
CUL3-211ENST00000487558 KCNK17Q96T54 332 aa12.92□□□□□ -0.34
CUL3-211ENST00000487558 FOSBP53539 338 aa12.91□□□□□ -0.34
CUL3-211ENST00000487558 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
CUL3-211ENST00000487558 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
CUL3-211ENST00000487558 EVI5O60447 810 aa12.88□□□□□ -0.35
CUL3-211ENST00000487558 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
CUL3-211ENST00000487558 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
CUL3-211ENST00000487558 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
CUL3-211ENST00000487558 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
CUL3-211ENST00000487558 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
CUL3-211ENST00000487558 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
CUL3-211ENST00000487558 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
CUL3-211ENST00000487558 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
CUL3-211ENST00000487558 PTPREP23469 700 aa12.79□□□□□ -0.36
CUL3-211ENST00000487558 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
CUL3-211ENST00000487558 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
CUL3-211ENST00000487558 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
CUL3-211ENST00000487558 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
CUL3-211ENST00000487558 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
CUL3-211ENST00000487558 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
CUL3-211ENST00000487558 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
CUL3-211ENST00000487558 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms