RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
LINC00888-204ENST00000487386 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
LINC00888-204ENST00000487386 KIF3CO14782 793 aa11.09□□□□□ -0.63
LINC00888-204ENST00000487386 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
LINC00888-204ENST00000487386 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
LINC00888-204ENST00000487386 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
LINC00888-204ENST00000487386 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
LINC00888-204ENST00000487386 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
LINC00888-204ENST00000487386 PDE4AP27815 886 aa11.02□□□□□ -0.65
LINC00888-204ENST00000487386 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
LINC00888-204ENST00000487386 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
LINC00888-204ENST00000487386 FOXK1P85037 733 aa10.99□□□□□ -0.65
LINC00888-204ENST00000487386 MFSD10Q14728 455 aa10.99□□□□□ -0.65
LINC00888-204ENST00000487386 DSG2Q14126 1118 aa10.97□□□□□ -0.65
LINC00888-204ENST00000487386 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
LINC00888-204ENST00000487386 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
LINC00888-204ENST00000487386 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
LINC00888-204ENST00000487386 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
LINC00888-204ENST00000487386 HOXB3P14651 431 aaPredicted RBP10.92□□□□□ -0.66
LINC00888-204ENST00000487386 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
LINC00888-204ENST00000487386 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
LINC00888-204ENST00000487386 SNPHO15079 494 aa10.89□□□□□ -0.67
LINC00888-204ENST00000487386 SLC34A2O95436 690 aa10.88□□□□□ -0.67
LINC00888-204ENST00000487386 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
LINC00888-204ENST00000487386 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
LINC00888-204ENST00000487386 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
LINC00888-204ENST00000487386 POTEMA6NI47 508 aa10.83□□□□□ -0.68
LINC00888-204ENST00000487386 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
LINC00888-204ENST00000487386 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
LINC00888-204ENST00000487386 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 E2F4Q16254 413 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 ZSWIM6Q9HCJ5 1215 aa10.81□□□□□ -0.68
LINC00888-204ENST00000487386 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
LINC00888-204ENST00000487386 ST18O60284 1047 aa10.79□□□□□ -0.68
LINC00888-204ENST00000487386 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
LINC00888-204ENST00000487386 RIMBP2O15034 1052 aa10.78□□□□□ -0.68
LINC00888-204ENST00000487386 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
LINC00888-204ENST00000487386 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
LINC00888-204ENST00000487386 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
LINC00888-204ENST00000487386 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
LINC00888-204ENST00000487386 HOXB1P14653 301 aaPredicted RBP10.76□□□□□ -0.69
LINC00888-204ENST00000487386 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
LINC00888-204ENST00000487386 ARSIQ5FYB1 569 aa10.75□□□□□ -0.69
LINC00888-204ENST00000487386 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
LINC00888-204ENST00000487386 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■■■■□ 22.2
LINC00888-204ENST00000487386 TBC1D12O60347 775 aa10.73□□□□□ -0.69
LINC00888-204ENST00000487386 KCNV2Q8TDN2 545 aa10.73□□□□□ -0.69
LINC00888-204ENST00000487386 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00888-204ENST00000487386 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
LINC00888-204ENST00000487386 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
LINC00888-204ENST00000487386 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
LINC00888-204ENST00000487386 DPYSL4O14531 572 aa10.69□□□□□ -0.7
LINC00888-204ENST00000487386 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
LINC00888-204ENST00000487386 NUDT7P0C024 238 aa10.67□□□□□ -0.7
LINC00888-204ENST00000487386 EVI5O60447 810 aa10.66□□□□□ -0.7
LINC00888-204ENST00000487386 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
LINC00888-204ENST00000487386 PDIA6Q15084 440 aa10.65□□□□□ -0.7
LINC00888-204ENST00000487386 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
LINC00888-204ENST00000487386 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
LINC00888-204ENST00000487386 EMP3P54852 163 aa10.62□□□□□ -0.71
LINC00888-204ENST00000487386 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
LINC00888-204ENST00000487386 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
LINC00888-204ENST00000487386 PTGER2P43116 358 aa10.61□□□□□ -0.71
LINC00888-204ENST00000487386 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
LINC00888-204ENST00000487386 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
LINC00888-204ENST00000487386 ERBB3P21860 1342 aa10.58□□□□□ -0.72
LINC00888-204ENST00000487386 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
LINC00888-204ENST00000487386 FOSBP53539 338 aa10.55□□□□□ -0.72
LINC00888-204ENST00000487386 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
LINC00888-204ENST00000487386 HS3ST6Q96QI5 342 aa10.55□□□□□ -0.72
LINC00888-204ENST00000487386 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
LINC00888-204ENST00000487386 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
LINC00888-204ENST00000487386 SEMA3EO15041 775 aa10.52□□□□□ -0.73
LINC00888-204ENST00000487386 PHF14O94880 888 aa10.52□□□□□ -0.73
LINC00888-204ENST00000487386 PCDHGA10Q9Y5H3 936 aa10.52□□□□□ -0.73
LINC00888-204ENST00000487386 DDX12PQ92771 950 aa10.51□□□□□ -0.73
LINC00888-204ENST00000487386 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
LINC00888-204ENST00000487386 MLLT3P42568 568 aaPredicted RBP10.5□□□□□ -0.73
LINC00888-204ENST00000487386 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
LINC00888-204ENST00000487386 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
LINC00888-204ENST00000487386 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
LINC00888-204ENST00000487386 EPAS1Q99814 870 aa10.49□□□□□ -0.73
LINC00888-204ENST00000487386 OSBPP22059 807 aa10.47□□□□□ -0.73
LINC00888-204ENST00000487386 ZDHHC16Q969W1 377 aa10.47□□□□□ -0.73
LINC00888-204ENST00000487386 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.73
LINC00888-204ENST00000487386 TYW1BQ6NUM6 668 aa10.46□□□□□ -0.73
LINC00888-204ENST00000487386 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
LINC00888-204ENST00000487386 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
LINC00888-204ENST00000487386 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
LINC00888-204ENST00000487386 ADAM33Q9BZ11 813 aa10.45□□□□□ -0.74
LINC00888-204ENST00000487386 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
LINC00888-204ENST00000487386 NBR1Q14596 966 aa10.43□□□□□ -0.74
LINC00888-204ENST00000487386 EN1Q05925 392 aaPredicted RBP10.42□□□□□ -0.74
LINC00888-204ENST00000487386 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
LINC00888-204ENST00000487386 PBX2P40425 430 aa10.41□□□□□ -0.74
LINC00888-204ENST00000487386 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
LINC00888-204ENST00000487386 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
LINC00888-204ENST00000487386 KRTAP3-3Q9BYR6 98 aa10.39□□□□□ -0.75
LINC00888-204ENST00000487386 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms