RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
SMARCAL1-212ENST00000486983 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
SMARCAL1-212ENST00000486983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
SMARCAL1-212ENST00000486983 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
SMARCAL1-212ENST00000486983 SOX12O15370 315 aa12.35□□□□□ -0.43
SMARCAL1-212ENST00000486983 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
SMARCAL1-212ENST00000486983 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
SMARCAL1-212ENST00000486983 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-212ENST00000486983 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
SMARCAL1-212ENST00000486983 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-212ENST00000486983 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
SMARCAL1-212ENST00000486983 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
SMARCAL1-212ENST00000486983 ARSIQ5FYB1 569 aa12.24□□□□□ -0.45
SMARCAL1-212ENST00000486983 DCAF8L2P0C7V8 631 aa12.23□□□□□ -0.45
SMARCAL1-212ENST00000486983 FBXO22Q8NEZ5 403 aa12.22□□□□□ -0.45
SMARCAL1-212ENST00000486983 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCAL1-212ENST00000486983 NLRP6P59044 892 aa12.2□□□□□ -0.46
SMARCAL1-212ENST00000486983 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
SMARCAL1-212ENST00000486983 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
SMARCAL1-212ENST00000486983 NACADO15069 1562 aa12.15□□□□□ -0.46
SMARCAL1-212ENST00000486983 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-212ENST00000486983 PTGER2P43116 358 aa12.14□□□□□ -0.47
SMARCAL1-212ENST00000486983 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
SMARCAL1-212ENST00000486983 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
SMARCAL1-212ENST00000486983 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
SMARCAL1-212ENST00000486983 KIF3CO14782 793 aa12.12□□□□□ -0.47
SMARCAL1-212ENST00000486983 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
SMARCAL1-212ENST00000486983 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMARCAL1-212ENST00000486983 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
SMARCAL1-212ENST00000486983 STK25O00506 426 aa12.07□□□□□ -0.48
SMARCAL1-212ENST00000486983 NUDT7P0C024 238 aa12.07□□□□□ -0.48
SMARCAL1-212ENST00000486983 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
SMARCAL1-212ENST00000486983 POTEEQ6S8J3 1075 aa12.02□□□□□ -0.49
SMARCAL1-212ENST00000486983 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
SMARCAL1-212ENST00000486983 PBX2P40425 430 aa12.01□□□□□ -0.49
SMARCAL1-212ENST00000486983 PCDHGA4Q9Y5G9 962 aa12.01□□□□□ -0.49
SMARCAL1-212ENST00000486983 SLC34A2O95436 690 aa11.99□□□□□ -0.49
SMARCAL1-212ENST00000486983 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
SMARCAL1-212ENST00000486983 ECM2O94769 699 aaPredicted RBP11.98□□□□□ -0.49
SMARCAL1-212ENST00000486983 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
SMARCAL1-212ENST00000486983 RB1CC1Q8TDY2 1594 aa11.95□□□□□ -0.5
SMARCAL1-212ENST00000486983 RGL2O15211 777 aa11.94□□□□□ -0.5
SMARCAL1-212ENST00000486983 PPP1R37O75864 691 aa11.91□□□□□ -0.5
SMARCAL1-212ENST00000486983 PKD2Q13563 968 aa11.9□□□□□ -0.5
SMARCAL1-212ENST00000486983 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-212ENST00000486983 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
SMARCAL1-212ENST00000486983 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
SMARCAL1-212ENST00000486983 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
SMARCAL1-212ENST00000486983 PLA2G2EQ9NZK7 142 aa11.85□□□□□ -0.51
SMARCAL1-212ENST00000486983 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-212ENST00000486983 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
SMARCAL1-212ENST00000486983 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
SMARCAL1-212ENST00000486983 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-212ENST00000486983 PSEN2P49810 448 aa11.79□□□□□ -0.52
SMARCAL1-212ENST00000486983 HRO43593 1189 aa11.78□□□□□ -0.52
SMARCAL1-212ENST00000486983 TK2O00142 265 aa11.77□□□□□ -0.53
SMARCAL1-212ENST00000486983 FOXK1P85037 733 aa11.77□□□□□ -0.53
SMARCAL1-212ENST00000486983 PLPP6Q8IY26 295 aa11.77□□□□□ -0.53
SMARCAL1-212ENST00000486983 DSG2Q14126 1118 aa11.73□□□□□ -0.53
SMARCAL1-212ENST00000486983 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
SMARCAL1-212ENST00000486983 GPHNQ9NQX3 736 aaPredicted RBP11.73□□□□□ -0.53
SMARCAL1-212ENST00000486983 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
SMARCAL1-212ENST00000486983 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
SMARCAL1-212ENST00000486983 CECR2Q9BXF3 1484 aa11.72□□□□□ -0.53
SMARCAL1-212ENST00000486983 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-212ENST00000486983 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
SMARCAL1-212ENST00000486983 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
SMARCAL1-212ENST00000486983 TBC1D12O60347 775 aa11.66□□□□□ -0.54
SMARCAL1-212ENST00000486983 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.54
SMARCAL1-212ENST00000486983 OXER1Q8TDS5 423 aa11.62□□□□□ -0.55
SMARCAL1-212ENST00000486983 VPS9D1Q9Y2B5 631 aa11.62□□□□□ -0.55
SMARCAL1-212ENST00000486983 WIZO95785 1651 aa11.62□□□□□ -0.55
SMARCAL1-212ENST00000486983 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
SMARCAL1-212ENST00000486983 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMARCAL1-212ENST00000486983 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
SMARCAL1-212ENST00000486983 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
SMARCAL1-212ENST00000486983 TOP2AP11388 1531 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-212ENST00000486983 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
SMARCAL1-212ENST00000486983 BICRAQ9NZM4 1560 aa11.57□□□□□ -0.56
SMARCAL1-212ENST00000486983 PTPN5P54829 565 aa11.56□□□□□ -0.56
SMARCAL1-212ENST00000486983 EIF4G1Q04637 1599 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-212ENST00000486983 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-212ENST00000486983 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
SMARCAL1-212ENST00000486983 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
SMARCAL1-212ENST00000486983 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
SMARCAL1-212ENST00000486983 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
SMARCAL1-212ENST00000486983 FOSBP53539 338 aa11.52□□□□□ -0.57
SMARCAL1-212ENST00000486983 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
SMARCAL1-212ENST00000486983 PEG3Q9GZU2 1588 aa11.52□□□□□ -0.57
SMARCAL1-212ENST00000486983 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
SMARCAL1-212ENST00000486983 THSD4Q6ZMP0 1018 aa11.5□□□□□ -0.57
SMARCAL1-212ENST00000486983 ZBED2Q9BTP6 218 aa11.49□□□□□ -0.57
SMARCAL1-212ENST00000486983 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
SMARCAL1-212ENST00000486983 PTPREP23469 700 aa11.48□□□□□ -0.57
SMARCAL1-212ENST00000486983 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
SMARCAL1-212ENST00000486983 SMARCA2P51531 1590 aa11.46□□□□□ -0.57
SMARCAL1-212ENST00000486983 JPH4Q96JJ6 628 aa11.46□□□□□ -0.57
SMARCAL1-212ENST00000486983 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
SMARCAL1-212ENST00000486983 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
SMARCAL1-212ENST00000486983 WNT2BQ93097 391 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms