RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 AKNAQ7Z591 1439 aa23.45■■□□□ 1.34
CLDN11-207ENST00000486975 CLIP1P30622 1438 aa23.44■■□□□ 1.34
CLDN11-207ENST00000486975 TROQ12816 1431 aaPredicted RBP23.44■■□□□ 1.34
CLDN11-207ENST00000486975 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
CLDN11-207ENST00000486975 PLCH2O75038 1416 aa23.43■■□□□ 1.34
CLDN11-207ENST00000486975 PCF11O94913 1555 aaKnown RBP23.43■■□□□ 1.34
CLDN11-207ENST00000486975 DENND4BO75064 1496 aaPredicted RBP23.43■■□□□ 1.34
CLDN11-207ENST00000486975 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
CLDN11-207ENST00000486975 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
CLDN11-207ENST00000486975 FYCO1Q9BQS8 1478 aa23.4■■□□□ 1.34
CLDN11-207ENST00000486975 KIF14Q15058 1648 aa23.4■■□□□ 1.34
CLDN11-207ENST00000486975 RICTORQ6R327 1708 aa23.38■■□□□ 1.33
CLDN11-207ENST00000486975 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
CLDN11-207ENST00000486975 MYO5CQ9NQX4 1742 aa23.35■■□□□ 1.33
CLDN11-207ENST00000486975 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.33
CLDN11-207ENST00000486975 NPM3O75607 178 aaKnown RBP23.32■■□□□ 1.32
CLDN11-207ENST00000486975 EFCAB2Q5VUJ9 269 aa23.32■■□□□ 1.32
CLDN11-207ENST00000486975 MAGI2Q86UL8 1455 aa23.3■■□□□ 1.32
CLDN11-207ENST00000486975 POGZQ7Z3K3 1410 aa23.3■■□□□ 1.32
CLDN11-207ENST00000486975 SCAPERQ9BY12 1400 aa23.3■■□□□ 1.32
CLDN11-207ENST00000486975 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
CLDN11-207ENST00000486975 ARHGAP5Q13017 1502 aa23.25■■□□□ 1.31
CLDN11-207ENST00000486975 RNF39Q9H2S5 420 aa23.25■■□□□ 1.31
CLDN11-207ENST00000486975 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
CLDN11-207ENST00000486975 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
CLDN11-207ENST00000486975 ADAMTSL3P82987 1691 aa23.24■■□□□ 1.31
CLDN11-207ENST00000486975 PREX2Q70Z35 1606 aa23.22■■□□□ 1.31
CLDN11-207ENST00000486975 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
CLDN11-207ENST00000486975 ZNF518AQ6AHZ1 1483 aa23.21■■□□□ 1.31
CLDN11-207ENST00000486975 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
CLDN11-207ENST00000486975 CDC42BPBQ9Y5S2 1711 aa23.19■■□□□ 1.3
CLDN11-207ENST00000486975 KDM5CP41229 1560 aa23.18■■□□□ 1.3
CLDN11-207ENST00000486975 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
CLDN11-207ENST00000486975 PTPRMP28827 1452 aa23.15■■□□□ 1.3
CLDN11-207ENST00000486975 ABCC1P33527 1531 aa23.14■■□□□ 1.3
CLDN11-207ENST00000486975 CDC42BPAQ5VT25 1732 aa23.13■■□□□ 1.29
CLDN11-207ENST00000486975 ATP10AO60312 1499 aa23.13■■□□□ 1.29
CLDN11-207ENST00000486975 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
CLDN11-207ENST00000486975 MADDQ8WXG6 1647 aa23.11■■□□□ 1.29
CLDN11-207ENST00000486975 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
CLDN11-207ENST00000486975 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
CLDN11-207ENST00000486975 C9orf84Q5VXU9 1444 aa23.1■■□□□ 1.29
CLDN11-207ENST00000486975 AFAP1Q8N556 730 aa23.1■■□□□ 1.29
CLDN11-207ENST00000486975 SIGLEC1Q9BZZ2 1709 aa23.1■■□□□ 1.29
CLDN11-207ENST00000486975 MLH3Q9UHC1 1453 aa23.1■■□□□ 1.29
CLDN11-207ENST00000486975 ARHGEF12Q9NZN5 1544 aa23.09■■□□□ 1.29
CLDN11-207ENST00000486975 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.28
CLDN11-207ENST00000486975 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
CLDN11-207ENST00000486975 ITSN2Q9NZM3 1697 aa23.07■■□□□ 1.28
CLDN11-207ENST00000486975 REREQ9P2R6 1566 aa23.06■■□□□ 1.28
CLDN11-207ENST00000486975 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
CLDN11-207ENST00000486975 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
CLDN11-207ENST00000486975 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
CLDN11-207ENST00000486975 DIP2CQ9Y2E4 1556 aa23.04■■□□□ 1.28
CLDN11-207ENST00000486975 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
CLDN11-207ENST00000486975 KIAA1107Q9UPP5 1409 aa23.02■■□□□ 1.28
CLDN11-207ENST00000486975 PLEKHH2Q8IVE3 1493 aa23.02■■□□□ 1.28
CLDN11-207ENST00000486975 RIMS1Q86UR5 1692 aaKnown RBP23.02■■□□□ 1.28
CLDN11-207ENST00000486975 KCNA4P22459 653 aa23■■□□□ 1.27
CLDN11-207ENST00000486975 CFDP1Q9UEE9 299 aaPredicted RBP23■■□□□ 1.27
CLDN11-207ENST00000486975 ABCA6Q8N139 1617 aa23■■□□□ 1.27
CLDN11-207ENST00000486975 SYCP2Q9BX26 1530 aa22.99■■□□□ 1.27
CLDN11-207ENST00000486975 TIAM1Q13009 1591 aa22.99■■□□□ 1.27
CLDN11-207ENST00000486975 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
CLDN11-207ENST00000486975 AGLP35573 1532 aa22.97■■□□□ 1.27
CLDN11-207ENST00000486975 KIDINS220Q9ULH0 1771 aa22.96■■□□□ 1.27
CLDN11-207ENST00000486975 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
CLDN11-207ENST00000486975 FER1L4A9Z1Z3 1794 aa22.95■■□□□ 1.26
CLDN11-207ENST00000486975 MLECQ14165 292 aa22.95■■□□□ 1.26
CLDN11-207ENST00000486975 HNRNPMP52272 730 aaKnown RBP eCLIP22.92■■□□□ 1.26
CLDN11-207ENST00000486975 NCOA2Q15596 1464 aa22.92■■□□□ 1.26
CLDN11-207ENST00000486975 SUPT6HQ7KZ85 1726 aaKnown RBP22.91■■□□□ 1.26
CLDN11-207ENST00000486975 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
CLDN11-207ENST00000486975 LMTK3Q96Q04 1460 aa22.91■■□□□ 1.26
CLDN11-207ENST00000486975 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
CLDN11-207ENST00000486975 C1QBPQ07021 282 aaKnown RBP22.9■■□□□ 1.26
CLDN11-207ENST00000486975 INO80Q9ULG1 1556 aaPredicted RBP22.89■■□□□ 1.26
CLDN11-207ENST00000486975 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
CLDN11-207ENST00000486975 LRRC9Q6ZRR7 1453 aa22.88■■□□□ 1.25
CLDN11-207ENST00000486975 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
CLDN11-207ENST00000486975 ZNF644Q9H582 1327 aaPredicted RBP22.85■■□□□ 1.25
CLDN11-207ENST00000486975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.83■■□□□ 1.25
CLDN11-207ENST00000486975 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
CLDN11-207ENST00000486975 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
CLDN11-207ENST00000486975 A2MP01023 1474 aa22.8■■□□□ 1.24
CLDN11-207ENST00000486975 CAMSAP2Q08AD1 1489 aa22.8■■□□□ 1.24
CLDN11-207ENST00000486975 CNTLNQ9NXG0 1405 aa22.8■■□□□ 1.24
CLDN11-207ENST00000486975 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
CLDN11-207ENST00000486975 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
CLDN11-207ENST00000486975 ADGBQ8N7X0 1667 aa22.76■■□□□ 1.23
CLDN11-207ENST00000486975 CEBPAP49715 358 aaPredicted RBP22.75■■□□□ 1.23
CLDN11-207ENST00000486975 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
CLDN11-207ENST00000486975 ESF1Q9H501 851 aaKnown RBP22.75■■□□□ 1.23
CLDN11-207ENST00000486975 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
CLDN11-207ENST00000486975 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
CLDN11-207ENST00000486975 C3P01024 1663 aa22.72■■□□□ 1.23
CLDN11-207ENST00000486975 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
CLDN11-207ENST00000486975 MYOM3Q5VTT5 1437 aa22.71■■□□□ 1.23
CLDN11-207ENST00000486975 MROH2AA6NES4 1674 aa22.71■■□□□ 1.23
CLDN11-207ENST00000486975 HSPA2P54652 639 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms