RNA–Protein interactions for RNA: ENST00000486881.1

CHL1-214, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 555 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-214ENST00000486881 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
CHL1-214ENST00000486881 MFRPQ9BY79 579 aa11.39□□□□□ -0.59
CHL1-214ENST00000486881 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
CHL1-214ENST00000486881 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
CHL1-214ENST00000486881 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
CHL1-214ENST00000486881 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
CHL1-214ENST00000486881 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
CHL1-214ENST00000486881 SPNS2Q8IVW8 549 aa11.33□□□□□ -0.6
CHL1-214ENST00000486881 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
CHL1-214ENST00000486881 ERBB3P21860 1342 aa11.32□□□□□ -0.6
CHL1-214ENST00000486881 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
CHL1-214ENST00000486881 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
CHL1-214ENST00000486881 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
CHL1-214ENST00000486881 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
CHL1-214ENST00000486881 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
CHL1-214ENST00000486881 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
CHL1-214ENST00000486881 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
CHL1-214ENST00000486881 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
CHL1-214ENST00000486881 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
CHL1-214ENST00000486881 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
CHL1-214ENST00000486881 PPP1R37O75864 691 aa11.22□□□□□ -0.61
CHL1-214ENST00000486881 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
CHL1-214ENST00000486881 KIF3CO14782 793 aa11.21□□□□□ -0.61
CHL1-214ENST00000486881 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
CHL1-214ENST00000486881 KHSRPQ92945 711 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHL1-214ENST00000486881 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
CHL1-214ENST00000486881 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
CHL1-214ENST00000486881 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
CHL1-214ENST00000486881 SLC34A2O95436 690 aa11.1□□□□□ -0.63
CHL1-214ENST00000486881 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
CHL1-214ENST00000486881 NUDT7P0C024 238 aa11.09□□□□□ -0.63
CHL1-214ENST00000486881 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
CHL1-214ENST00000486881 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
CHL1-214ENST00000486881 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
CHL1-214ENST00000486881 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
CHL1-214ENST00000486881 FOXK1P85037 733 aa11.02□□□□□ -0.65
CHL1-214ENST00000486881 PLPP6Q8IY26 295 aa11.02□□□□□ -0.65
CHL1-214ENST00000486881 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
CHL1-214ENST00000486881 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
CHL1-214ENST00000486881 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
CHL1-214ENST00000486881 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
CHL1-214ENST00000486881 DSG2Q14126 1118 aa10.98□□□□□ -0.65
CHL1-214ENST00000486881 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
CHL1-214ENST00000486881 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
CHL1-214ENST00000486881 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
CHL1-214ENST00000486881 PBX2P40425 430 aa10.95□□□□□ -0.66
CHL1-214ENST00000486881 TBC1D12O60347 775 aa10.94□□□□□ -0.66
CHL1-214ENST00000486881 PTGER2P43116 358 aa10.94□□□□□ -0.66
CHL1-214ENST00000486881 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
CHL1-214ENST00000486881 PSDA5PKW4 1024 aaPredicted RBP10.93□□□□□ -0.66
CHL1-214ENST00000486881 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
CHL1-214ENST00000486881 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
CHL1-214ENST00000486881 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
CHL1-214ENST00000486881 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
CHL1-214ENST00000486881 CRISPLD2Q9H0B8 497 aa10.89□□□□□ -0.67
CHL1-214ENST00000486881 ARHGAP33O14559 1287 aa10.88□□□□□ -0.67
CHL1-214ENST00000486881 PDE4AP27815 886 aa10.87□□□□□ -0.67
CHL1-214ENST00000486881 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
CHL1-214ENST00000486881 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHL1-214ENST00000486881 PPP4R3BQ5MIZ7 849 aa10.85□□□□□ -0.67
CHL1-214ENST00000486881 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
CHL1-214ENST00000486881 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
CHL1-214ENST00000486881 PSEN2P49810 448 aa10.81□□□□□ -0.68
CHL1-214ENST00000486881 ADGRD1Q6QNK2 874 aa10.81□□□□□ -0.68
CHL1-214ENST00000486881 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
CHL1-214ENST00000486881 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
CHL1-214ENST00000486881 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
CHL1-214ENST00000486881 TK2O00142 265 aa10.77□□□□□ -0.69
CHL1-214ENST00000486881 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
CHL1-214ENST00000486881 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
CHL1-214ENST00000486881 KCNH8Q96L42 1107 aa10.75□□□□□ -0.69
CHL1-214ENST00000486881 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
CHL1-214ENST00000486881 EVI5O60447 810 aa10.72□□□□□ -0.69
CHL1-214ENST00000486881 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
CHL1-214ENST00000486881 MFSD10Q14728 455 aa10.72□□□□□ -0.69
CHL1-214ENST00000486881 STAC3Q96MF2 364 aa10.72□□□□□ -0.69
CHL1-214ENST00000486881 ANO8Q9HCE9 1232 aaPredicted RBP10.72□□□□□ -0.69
CHL1-214ENST00000486881 HRO43593 1189 aa10.71□□□□□ -0.69
CHL1-214ENST00000486881 FOSBP53539 338 aa10.7□□□□□ -0.7
CHL1-214ENST00000486881 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
CHL1-214ENST00000486881 BCL2L12Q9HB09 334 aa10.69□□□□□ -0.7
CHL1-214ENST00000486881 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
CHL1-214ENST00000486881 PTPREP23469 700 aa10.66□□□□□ -0.7
CHL1-214ENST00000486881 JPH4Q96JJ6 628 aa10.66□□□□□ -0.7
CHL1-214ENST00000486881 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
CHL1-214ENST00000486881 VPS9D1Q9Y2B5 631 aa10.66□□□□□ -0.7
CHL1-214ENST00000486881 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
CHL1-214ENST00000486881 ZDHHC16Q969W1 377 aa10.64□□□□□ -0.71
CHL1-214ENST00000486881 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
CHL1-214ENST00000486881 SLC4A5Q9BY07 1137 aa10.62□□□□□ -0.71
CHL1-214ENST00000486881 ADAM33Q9BZ11 813 aa10.62□□□□□ -0.71
CHL1-214ENST00000486881 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
CHL1-214ENST00000486881 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
CHL1-214ENST00000486881 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
CHL1-214ENST00000486881 ZBED2Q9BTP6 218 aa10.59□□□□□ -0.71
CHL1-214ENST00000486881 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
CHL1-214ENST00000486881 BHMG1C9JSJ3 638 aaPredicted RBP10.56□□□□□ -0.72
CHL1-214ENST00000486881 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
CHL1-214ENST00000486881 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
CHL1-214ENST00000486881 PTPN5P54829 565 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms