RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
APH1A-208ENST00000486720 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
APH1A-208ENST00000486720 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
APH1A-208ENST00000486720 ITSN2Q9NZM3 1697 aa22.75■■□□□ 1.23
APH1A-208ENST00000486720 CFDP1Q9UEE9 299 aaPredicted RBP22.73■■□□□ 1.23
APH1A-208ENST00000486720 CDC42BPBQ9Y5S2 1711 aa22.73■■□□□ 1.23
APH1A-208ENST00000486720 AKNAQ7Z591 1439 aa22.73■■□□□ 1.23
APH1A-208ENST00000486720 KDM6BO15054 1643 aa22.69■■□□□ 1.22
APH1A-208ENST00000486720 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
APH1A-208ENST00000486720 ADGRL1O94910 1474 aa22.67■■□□□ 1.22
APH1A-208ENST00000486720 MIA2Q96PC5 1412 aa22.66■■□□□ 1.22
APH1A-208ENST00000486720 ZNF777Q9ULD5 760 aaPredicted RBP22.66■■□□□ 1.22
APH1A-208ENST00000486720 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
APH1A-208ENST00000486720 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
APH1A-208ENST00000486720 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
APH1A-208ENST00000486720 PPARGC1BQ86YN6 1023 aaKnown RBP22.63■■□□□ 1.21
APH1A-208ENST00000486720 ABCC1P33527 1531 aa22.62■■□□□ 1.21
APH1A-208ENST00000486720 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
APH1A-208ENST00000486720 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
APH1A-208ENST00000486720 KIAA1107Q9UPP5 1409 aa22.61■■□□□ 1.21
APH1A-208ENST00000486720 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
APH1A-208ENST00000486720 CAMSAP2Q08AD1 1489 aa22.58■■□□□ 1.2
APH1A-208ENST00000486720 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
APH1A-208ENST00000486720 ZNF518AQ6AHZ1 1483 aa22.56■■□□□ 1.2
APH1A-208ENST00000486720 RAPGEF3O95398 923 aa22.56■■□□□ 1.2
APH1A-208ENST00000486720 SYCP2Q9BX26 1530 aa22.56■■□□□ 1.2
APH1A-208ENST00000486720 ZNF644Q9H582 1327 aaPredicted RBP22.56■■□□□ 1.2
APH1A-208ENST00000486720 ARHGEF12Q9NZN5 1544 aa22.54■■□□□ 1.2
APH1A-208ENST00000486720 RICTORQ6R327 1708 aa22.54■■□□□ 1.2
APH1A-208ENST00000486720 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.2
APH1A-208ENST00000486720 RSPH4AQ5TD94 716 aa22.53■■□□□ 1.2
APH1A-208ENST00000486720 FRMPD1Q5SYB0 1578 aa22.53■■□□□ 1.2
APH1A-208ENST00000486720 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
APH1A-208ENST00000486720 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
APH1A-208ENST00000486720 TRAPPC8Q9Y2L5 1435 aa22.51■■□□□ 1.19
APH1A-208ENST00000486720 ZMYM4Q5VZL5 1548 aa22.51■■□□□ 1.19
APH1A-208ENST00000486720 MBD5Q9P267 1494 aa22.5■■□□□ 1.19
APH1A-208ENST00000486720 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
APH1A-208ENST00000486720 KDM5CP41229 1560 aa22.49■■□□□ 1.19
APH1A-208ENST00000486720 ARHGEF5Q12774 1597 aa22.49■■□□□ 1.19
APH1A-208ENST00000486720 MAGI2Q86UL8 1455 aa22.48■■□□□ 1.19
APH1A-208ENST00000486720 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
APH1A-208ENST00000486720 FAM50AQ14320 339 aaKnown RBP22.45■■□□□ 1.18
APH1A-208ENST00000486720 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
APH1A-208ENST00000486720 HECW2Q9P2P5 1572 aa22.43■■□□□ 1.18
APH1A-208ENST00000486720 RRBP1Q9P2E9 1410 aaKnown RBP22.43■■□□□ 1.18
APH1A-208ENST00000486720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.43■■□□□ 1.18
APH1A-208ENST00000486720 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
APH1A-208ENST00000486720 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
APH1A-208ENST00000486720 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
APH1A-208ENST00000486720 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
APH1A-208ENST00000486720 ZFYVE16Q7Z3T8 1539 aa22.41■■□□□ 1.18
APH1A-208ENST00000486720 RTEL1-TNFRSF6BF6WH68 1400 aa22.4■■□□□ 1.18
APH1A-208ENST00000486720 DNMT1P26358 1616 aaKnown RBP22.39■■□□□ 1.18
APH1A-208ENST00000486720 ARHGEF40Q8TER5 1519 aa22.39■■□□□ 1.17
APH1A-208ENST00000486720 DAPK1P53355 1430 aa22.38■■□□□ 1.17
APH1A-208ENST00000486720 INO80Q9ULG1 1556 aaPredicted RBP22.38■■□□□ 1.17
APH1A-208ENST00000486720 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
APH1A-208ENST00000486720 SHANK2Q9UPX8 1470 aa22.37■■□□□ 1.17
APH1A-208ENST00000486720 ABCC5O15440 1437 aa22.37■■□□□ 1.17
APH1A-208ENST00000486720 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
APH1A-208ENST00000486720 MAST1Q9Y2H9 1570 aa22.36■■□□□ 1.17
APH1A-208ENST00000486720 KIDINS220Q9ULH0 1771 aa22.35■■□□□ 1.17
APH1A-208ENST00000486720 C9orf84Q5VXU9 1444 aa22.34■■□□□ 1.17
APH1A-208ENST00000486720 ATP10AO60312 1499 aa22.34■■□□□ 1.17
APH1A-208ENST00000486720 CROCC2H7BZ55 1655 aa22.33■■□□□ 1.17
APH1A-208ENST00000486720 DIP2CQ9Y2E4 1556 aa22.32■■□□□ 1.16
APH1A-208ENST00000486720 ABCA6Q8N139 1617 aa22.31■■□□□ 1.16
APH1A-208ENST00000486720 REREQ9P2R6 1566 aa22.28■■□□□ 1.16
APH1A-208ENST00000486720 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
APH1A-208ENST00000486720 PLXNC1O60486 1568 aa22.26■■□□□ 1.15
APH1A-208ENST00000486720 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
APH1A-208ENST00000486720 A2MP01023 1474 aa22.25■■□□□ 1.15
APH1A-208ENST00000486720 ADGRL2O95490 1459 aa22.24■■□□□ 1.15
APH1A-208ENST00000486720 ITGAEP38570 1179 aa22.24■■□□□ 1.15
APH1A-208ENST00000486720 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
APH1A-208ENST00000486720 ARID4BQ4LE39 1312 aaPredicted RBP22.22■■□□□ 1.15
APH1A-208ENST00000486720 ROCK1Q13464 1354 aa22.22■■□□□ 1.15
APH1A-208ENST00000486720 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
APH1A-208ENST00000486720 PTPRKQ15262 1439 aa22.22■■□□□ 1.15
APH1A-208ENST00000486720 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
APH1A-208ENST00000486720 NCOA1Q15788 1441 aa22.21■■□□□ 1.15
APH1A-208ENST00000486720 AGLP35573 1532 aa22.21■■□□□ 1.15
APH1A-208ENST00000486720 DUOX2Q9NRD8 1548 aa22.2■■□□□ 1.14
APH1A-208ENST00000486720 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
APH1A-208ENST00000486720 ERBINQ96RT1 1412 aa22.14■■□□□ 1.14
APH1A-208ENST00000486720 SIGLEC1Q9BZZ2 1709 aa22.13■■□□□ 1.13
APH1A-208ENST00000486720 EIF2AK4Q9P2K8 1649 aaKnown RBP22.12■■□□□ 1.13
APH1A-208ENST00000486720 KIF3BO15066 747 aa22.1■■□□□ 1.13
APH1A-208ENST00000486720 BCORL1Q5H9F3 1711 aa22.1■■□□□ 1.13
APH1A-208ENST00000486720 ANKRD50Q9ULJ7 1429 aa22.09■■□□□ 1.13
APH1A-208ENST00000486720 MLECQ14165 292 aa22.09■■□□□ 1.13
APH1A-208ENST00000486720 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
APH1A-208ENST00000486720 HFM1A2PYH4 1435 aa22.06■■□□□ 1.12
APH1A-208ENST00000486720 GGT6Q6P531 493 aa22.05■■□□□ 1.12
APH1A-208ENST00000486720 NAIPQ13075 1403 aa22.04■■□□□ 1.12
APH1A-208ENST00000486720 ADAMTSL3P82987 1691 aa22.04■■□□□ 1.12
APH1A-208ENST00000486720 RNF17Q9BXT8 1623 aaKnown RBP22.03■■□□□ 1.12
APH1A-208ENST00000486720 ESF1Q9H501 851 aaKnown RBP22.03■■□□□ 1.12
APH1A-208ENST00000486720 GCC2Q8IWJ2 1684 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms