RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 KDM6BO15054 1643 aa29.17■■■□□ 2.26
PCOLCE-207ENST00000486440 CFAP74Q9C0B2 1584 aa29.17■■■□□ 2.26
PCOLCE-207ENST00000486440 ARHGAP5Q13017 1502 aa29.15■■■□□ 2.26
PCOLCE-207ENST00000486440 AKNAQ7Z591 1439 aa29.13■■■□□ 2.25
PCOLCE-207ENST00000486440 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
PCOLCE-207ENST00000486440 CCNB3Q8WWL7 1395 aa29.13■■■□□ 2.25
PCOLCE-207ENST00000486440 PHLDB1Q86UU1 1377 aa29.12■■■□□ 2.25
PCOLCE-207ENST00000486440 EFCAB2Q5VUJ9 269 aa29.11■■■□□ 2.25
PCOLCE-207ENST00000486440 RICTORQ6R327 1708 aa29.07■■■□□ 2.24
PCOLCE-207ENST00000486440 SAMD9LQ8IVG5 1584 aa29.07■■■□□ 2.24
PCOLCE-207ENST00000486440 FRMPD1Q5SYB0 1578 aa29.04■■■□□ 2.24
PCOLCE-207ENST00000486440 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
PCOLCE-207ENST00000486440 CFDP1Q9UEE9 299 aaPredicted RBP29.03■■■□□ 2.24
PCOLCE-207ENST00000486440 ADGRL1O94910 1474 aa29.03■■■□□ 2.24
PCOLCE-207ENST00000486440 ABCC1P33527 1531 aa29.01■■■□□ 2.23
PCOLCE-207ENST00000486440 ARHGEF12Q9NZN5 1544 aa29.01■■■□□ 2.23
PCOLCE-207ENST00000486440 SCAPERQ9BY12 1400 aa29■■■□□ 2.23
PCOLCE-207ENST00000486440 RAPGEF3O95398 923 aa28.99■■■□□ 2.23
PCOLCE-207ENST00000486440 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
PCOLCE-207ENST00000486440 MYOM3Q5VTT5 1437 aa28.98■■■□□ 2.23
PCOLCE-207ENST00000486440 ZNF777Q9ULD5 760 aaPredicted RBP28.98■■■□□ 2.23
PCOLCE-207ENST00000486440 DENND4BO75064 1496 aaPredicted RBP28.97■■■□□ 2.23
PCOLCE-207ENST00000486440 SYCP2Q9BX26 1530 aa28.92■■■□□ 2.22
PCOLCE-207ENST00000486440 POGZQ7Z3K3 1410 aa28.92■■■□□ 2.22
PCOLCE-207ENST00000486440 MIA2Q96PC5 1412 aa28.91■■■□□ 2.22
PCOLCE-207ENST00000486440 KIAA1107Q9UPP5 1409 aa28.91■■■□□ 2.22
PCOLCE-207ENST00000486440 TRAPPC8Q9Y2L5 1435 aa28.91■■■□□ 2.22
PCOLCE-207ENST00000486440 CAMSAP2Q08AD1 1489 aa28.9■■■□□ 2.22
PCOLCE-207ENST00000486440 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.22
PCOLCE-207ENST00000486440 PLEKHH2Q8IVE3 1493 aa28.88■■■□□ 2.21
PCOLCE-207ENST00000486440 MBD5Q9P267 1494 aa28.88■■■□□ 2.21
PCOLCE-207ENST00000486440 ZMYM4Q5VZL5 1548 aa28.88■■■□□ 2.21
PCOLCE-207ENST00000486440 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
PCOLCE-207ENST00000486440 AFAP1Q8N556 730 aa28.87■■■□□ 2.21
PCOLCE-207ENST00000486440 KDM5CP41229 1560 aa28.87■■■□□ 2.21
PCOLCE-207ENST00000486440 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
PCOLCE-207ENST00000486440 ZNF518AQ6AHZ1 1483 aa28.85■■■□□ 2.21
PCOLCE-207ENST00000486440 TCOF1Q13428 1488 aaKnown RBP28.8■■■□□ 2.2
PCOLCE-207ENST00000486440 KIDINS220Q9ULH0 1771 aa28.8■■■□□ 2.2
PCOLCE-207ENST00000486440 ARHGEF5Q12774 1597 aa28.79■■■□□ 2.2
PCOLCE-207ENST00000486440 HECW2Q9P2P5 1572 aa28.76■■■□□ 2.19
PCOLCE-207ENST00000486440 MAGI2Q86UL8 1455 aa28.75■■■□□ 2.19
PCOLCE-207ENST00000486440 MLH3Q9UHC1 1453 aa28.75■■■□□ 2.19
PCOLCE-207ENST00000486440 YEATS2Q9ULM3 1422 aa28.75■■■□□ 2.19
PCOLCE-207ENST00000486440 ZFYVE16Q7Z3T8 1539 aa28.73■■■□□ 2.19
PCOLCE-207ENST00000486440 ARHGEF40Q8TER5 1519 aa28.73■■■□□ 2.19
PCOLCE-207ENST00000486440 INO80Q9ULG1 1556 aaPredicted RBP28.72■■■□□ 2.19
PCOLCE-207ENST00000486440 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
PCOLCE-207ENST00000486440 ABCA6Q8N139 1617 aa28.71■■■□□ 2.19
PCOLCE-207ENST00000486440 SIGLEC1Q9BZZ2 1709 aa28.71■■■□□ 2.19
PCOLCE-207ENST00000486440 CROCC2H7BZ55 1655 aa28.7■■■□□ 2.18
PCOLCE-207ENST00000486440 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
PCOLCE-207ENST00000486440 RSPH4AQ5TD94 716 aa28.69■■■□□ 2.18
PCOLCE-207ENST00000486440 DIP2CQ9Y2E4 1556 aa28.68■■■□□ 2.18
PCOLCE-207ENST00000486440 SPAG9O60271 1321 aaKnown RBP28.68■■■□□ 2.18
PCOLCE-207ENST00000486440 ATP7AQ04656 1500 aa28.67■■■□□ 2.18
PCOLCE-207ENST00000486440 ABCC5O15440 1437 aa28.66■■■□□ 2.18
PCOLCE-207ENST00000486440 MAST1Q9Y2H9 1570 aa28.64■■■□□ 2.18
PCOLCE-207ENST00000486440 RRBP1Q9P2E9 1410 aaKnown RBP28.64■■■□□ 2.18
PCOLCE-207ENST00000486440 FAM50AQ14320 339 aaKnown RBP28.63■■■□□ 2.17
PCOLCE-207ENST00000486440 RTEL1-TNFRSF6BF6WH68 1400 aa28.62■■■□□ 2.17
PCOLCE-207ENST00000486440 DAPK1P53355 1430 aa28.62■■■□□ 2.17
PCOLCE-207ENST00000486440 ADGBQ8N7X0 1667 aa28.62■■■□□ 2.17
PCOLCE-207ENST00000486440 ATP10AO60312 1499 aa28.62■■■□□ 2.17
PCOLCE-207ENST00000486440 MYT1LQ9UL68 1186 aa28.59■■■□□ 2.17
PCOLCE-207ENST00000486440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.59■■■□□ 2.17
PCOLCE-207ENST00000486440 TSPY4P0CV99 314 aa28.57■■■□□ 2.16
PCOLCE-207ENST00000486440 TSPY10P0CW01 314 aa28.57■■■□□ 2.16
PCOLCE-207ENST00000486440 REREQ9P2R6 1566 aa28.57■■■□□ 2.16
PCOLCE-207ENST00000486440 C9orf84Q5VXU9 1444 aa28.56■■■□□ 2.16
PCOLCE-207ENST00000486440 SHANK2Q9UPX8 1470 aa28.55■■■□□ 2.16
PCOLCE-207ENST00000486440 PTPRKQ15262 1439 aa28.54■■■□□ 2.16
PCOLCE-207ENST00000486440 PLXNC1O60486 1568 aa28.52■■■□□ 2.16
PCOLCE-207ENST00000486440 BCORL1Q5H9F3 1711 aa28.49■■■□□ 2.15
PCOLCE-207ENST00000486440 A2MP01023 1474 aa28.48■■■□□ 2.15
PCOLCE-207ENST00000486440 CHIC2Q9UKJ5 165 aa28.47■■■□□ 2.15
PCOLCE-207ENST00000486440 AGLP35573 1532 aa28.46■■■□□ 2.15
PCOLCE-207ENST00000486440 ADGRL2O95490 1459 aa28.45■■■□□ 2.14
PCOLCE-207ENST00000486440 NCOA1Q15788 1441 aa28.43■■■□□ 2.14
PCOLCE-207ENST00000486440 ADAMTSL3P82987 1691 aa28.43■■■□□ 2.14
PCOLCE-207ENST00000486440 DHX29Q7Z478 1369 aaKnown RBP28.43■■■□□ 2.14
PCOLCE-207ENST00000486440 ARID4BQ4LE39 1312 aaPredicted RBP28.42■■■□□ 2.14
PCOLCE-207ENST00000486440 KDM4FA0A1W2PPD8 638 aa28.41■■■□□ 2.14
PCOLCE-207ENST00000486440 ITGAEP38570 1179 aa28.41■■■□□ 2.14
PCOLCE-207ENST00000486440 RRP7BPQ9NSQ0 103 aa28.39■■■□□ 2.14
PCOLCE-207ENST00000486440 DUOX2Q9NRD8 1548 aa28.38■■■□□ 2.13
PCOLCE-207ENST00000486440 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
PCOLCE-207ENST00000486440 KIF15Q9NS87 1388 aa28.37■■■□□ 2.13
PCOLCE-207ENST00000486440 ROCK1Q13464 1354 aa28.34■■■□□ 2.13
PCOLCE-207ENST00000486440 MADDQ8WXG6 1647 aa28.33■■■□□ 2.13
PCOLCE-207ENST00000486440 EIF2AK4Q9P2K8 1649 aaKnown RBP28.33■■■□□ 2.13
PCOLCE-207ENST00000486440 FER1L4A9Z1Z3 1794 aa28.32■■■□□ 2.12
PCOLCE-207ENST00000486440 MLECQ14165 292 aa28.32■■■□□ 2.12
PCOLCE-207ENST00000486440 KIF3BO15066 747 aa28.28■■■□□ 2.12
PCOLCE-207ENST00000486440 RNF17Q9BXT8 1623 aaKnown RBP28.28■■■□□ 2.12
PCOLCE-207ENST00000486440 RIMS1Q86UR5 1692 aaKnown RBP28.27■■■□□ 2.12
PCOLCE-207ENST00000486440 ERBINQ96RT1 1412 aa28.26■■■□□ 2.11
PCOLCE-207ENST00000486440 MROH1Q8NDA8 1641 aa28.25■■■□□ 2.11
PCOLCE-207ENST00000486440 DEPDC5O75140 1603 aa28.23■■■□□ 2.11
PCOLCE-207ENST00000486440 GCC2Q8IWJ2 1684 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms