RNA–Protein interactions for RNA: ENST00000486223.1

FREM1-208, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 3

Gene FREM1, Length 815 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-208ENST00000486223 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
FREM1-208ENST00000486223 HS3ST6Q96QI5 342 aa10.5□□□□□ -0.73
FREM1-208ENST00000486223 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
FREM1-208ENST00000486223 KIF3CO14782 793 aa10.49□□□□□ -0.73
FREM1-208ENST00000486223 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
FREM1-208ENST00000486223 GPR153Q6NV75 609 aa10.46□□□□□ -0.73
FREM1-208ENST00000486223 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
FREM1-208ENST00000486223 DOK7Q18PE1 504 aa10.43□□□□□ -0.74
FREM1-208ENST00000486223 HS6ST3Q8IZP7 471 aa10.43□□□□□ -0.74
FREM1-208ENST00000486223 C2orf72A6NCS6 295 aa10.42□□□□□ -0.74
FREM1-208ENST00000486223 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
FREM1-208ENST00000486223 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
FREM1-208ENST00000486223 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
FREM1-208ENST00000486223 MMRN1Q13201 1228 aa10.39□□□□□ -0.75
FREM1-208ENST00000486223 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
FREM1-208ENST00000486223 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
FREM1-208ENST00000486223 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
FREM1-208ENST00000486223 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
FREM1-208ENST00000486223 ERBB3P21860 1342 aa10.33□□□□□ -0.76
FREM1-208ENST00000486223 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
FREM1-208ENST00000486223 RIMBP2O15034 1052 aa10.31□□□□□ -0.76
FREM1-208ENST00000486223 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
FREM1-208ENST00000486223 SLC34A2O95436 690 aa10.27□□□□□ -0.77
FREM1-208ENST00000486223 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
FREM1-208ENST00000486223 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
FREM1-208ENST00000486223 POTEEQ6S8J3 1075 aa10.25□□□□□ -0.77
FREM1-208ENST00000486223 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
FREM1-208ENST00000486223 NUDT7P0C024 238 aa10.24□□□□□ -0.77
FREM1-208ENST00000486223 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
FREM1-208ENST00000486223 DSG2Q14126 1118 aa10.22□□□□□ -0.77
FREM1-208ENST00000486223 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
FREM1-208ENST00000486223 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.77
FREM1-208ENST00000486223 FOXK1P85037 733 aa10.21□□□□□ -0.77
FREM1-208ENST00000486223 LHX6Q9UPM6 363 aa10.21□□□□□ -0.77
FREM1-208ENST00000486223 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
FREM1-208ENST00000486223 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
FREM1-208ENST00000486223 CRISPLD2Q9H0B8 497 aa10.17□□□□□ -0.78
FREM1-208ENST00000486223 NCKAP5LQ9HCH0 1330 aa10.16□□□□□ -0.78
FREM1-208ENST00000486223 AXIN2Q9Y2T1 843 aa10.12□□□□□ -0.79
FREM1-208ENST00000486223 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
FREM1-208ENST00000486223 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
FREM1-208ENST00000486223 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
FREM1-208ENST00000486223 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
FREM1-208ENST00000486223 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
FREM1-208ENST00000486223 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
FREM1-208ENST00000486223 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
FREM1-208ENST00000486223 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
FREM1-208ENST00000486223 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
FREM1-208ENST00000486223 PBX2P40425 430 aa10.02□□□□□ -0.81
FREM1-208ENST00000486223 PSEN2P49810 448 aa10.01□□□□□ -0.81
FREM1-208ENST00000486223 MFSD10Q14728 455 aa10.01□□□□□ -0.81
FREM1-208ENST00000486223 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
FREM1-208ENST00000486223 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
FREM1-208ENST00000486223 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
FREM1-208ENST00000486223 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
FREM1-208ENST00000486223 PDE4AP27815 886 aa9.98□□□□□ -0.81
FREM1-208ENST00000486223 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
FREM1-208ENST00000486223 ANO8Q9HCE9 1232 aaPredicted RBP9.97□□□□□ -0.81
FREM1-208ENST00000486223 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
FREM1-208ENST00000486223 HRO43593 1189 aa9.95□□□□□ -0.82
FREM1-208ENST00000486223 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
FREM1-208ENST00000486223 TBC1D12O60347 775 aa9.94□□□□□ -0.82
FREM1-208ENST00000486223 PTGER2P43116 358 aa9.93□□□□□ -0.82
FREM1-208ENST00000486223 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
FREM1-208ENST00000486223 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
FREM1-208ENST00000486223 FOSBP53539 338 aa9.92□□□□□ -0.82
FREM1-208ENST00000486223 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
FREM1-208ENST00000486223 EVI5O60447 810 aa9.9□□□□□ -0.82
FREM1-208ENST00000486223 TK2O00142 265 aa9.89□□□□□ -0.83
FREM1-208ENST00000486223 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
FREM1-208ENST00000486223 KCNK17Q96T54 332 aa9.89□□□□□ -0.83
FREM1-208ENST00000486223 BBXQ8WY36 941 aaPredicted RBP9.88□□□□□ -0.83
FREM1-208ENST00000486223 CAMK2BQ13554 666 aa9.87□□□□□ -0.83
FREM1-208ENST00000486223 BCL2L12Q9HB09 334 aa9.87□□□□□ -0.83
FREM1-208ENST00000486223 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
FREM1-208ENST00000486223 VPS9D1Q9Y2B5 631 aa9.86□□□□□ -0.83
FREM1-208ENST00000486223 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
FREM1-208ENST00000486223 PCDHGA10Q9Y5H3 936 aa9.83□□□□□ -0.84
FREM1-208ENST00000486223 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
FREM1-208ENST00000486223 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
FREM1-208ENST00000486223 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
FREM1-208ENST00000486223 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
FREM1-208ENST00000486223 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
FREM1-208ENST00000486223 ZDHHC16Q969W1 377 aa9.79□□□□□ -0.84
FREM1-208ENST00000486223 DPYSL4O14531 572 aa9.78□□□□□ -0.84
FREM1-208ENST00000486223 COL9A1P20849 921 aa9.77□□□□□ -0.85
FREM1-208ENST00000486223 PTPREP23469 700 aa9.75□□□□□ -0.85
FREM1-208ENST00000486223 SPRYD3Q8NCJ5 442 aa9.74□□□□□ -0.85
FREM1-208ENST00000486223 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
FREM1-208ENST00000486223 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
FREM1-208ENST00000486223 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
FREM1-208ENST00000486223 PHF14O94880 888 aa9.71□□□□□ -0.86
FREM1-208ENST00000486223 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
FREM1-208ENST00000486223 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
FREM1-208ENST00000486223 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
FREM1-208ENST00000486223 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
FREM1-208ENST00000486223 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
FREM1-208ENST00000486223 DDX12PQ92771 950 aa9.67□□□□□ -0.86
FREM1-208ENST00000486223 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
FREM1-208ENST00000486223 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms