RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 ARHGAP5Q13017 1502 aa26.75■■□□□ 1.87
CCHCR1-214ENST00000486060 ZMYM4Q5VZL5 1548 aa26.75■■□□□ 1.87
CCHCR1-214ENST00000486060 ARHGEF40Q8TER5 1519 aa26.73■■□□□ 1.87
CCHCR1-214ENST00000486060 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
CCHCR1-214ENST00000486060 SIGLEC1Q9BZZ2 1709 aa26.71■■□□□ 1.87
CCHCR1-214ENST00000486060 EFCAB2Q5VUJ9 269 aa26.71■■□□□ 1.87
CCHCR1-214ENST00000486060 POGZQ7Z3K3 1410 aa26.71■■□□□ 1.87
CCHCR1-214ENST00000486060 ITSN2Q9NZM3 1697 aa26.66■■□□□ 1.86
CCHCR1-214ENST00000486060 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
CCHCR1-214ENST00000486060 YEATS2Q9ULM3 1422 aa26.65■■□□□ 1.86
CCHCR1-214ENST00000486060 ABCC1P33527 1531 aa26.65■■□□□ 1.86
CCHCR1-214ENST00000486060 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
CCHCR1-214ENST00000486060 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
CCHCR1-214ENST00000486060 GPATCH8Q9UKJ3 1502 aaKnown RBP26.65■■□□□ 1.86
CCHCR1-214ENST00000486060 EHBP1L1Q8N3D4 1523 aa26.64■■□□□ 1.85
CCHCR1-214ENST00000486060 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
CCHCR1-214ENST00000486060 KDM5CP41229 1560 aa26.63■■□□□ 1.85
CCHCR1-214ENST00000486060 SAMD9LQ8IVG5 1584 aa26.63■■□□□ 1.85
CCHCR1-214ENST00000486060 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
CCHCR1-214ENST00000486060 MTUS2Q5JR59 1369 aa26.62■■□□□ 1.85
CCHCR1-214ENST00000486060 TIAM1Q13009 1591 aa26.62■■□□□ 1.85
CCHCR1-214ENST00000486060 MAGI2Q86UL8 1455 aa26.61■■□□□ 1.85
CCHCR1-214ENST00000486060 ZNF518AQ6AHZ1 1483 aa26.58■■□□□ 1.85
CCHCR1-214ENST00000486060 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
CCHCR1-214ENST00000486060 AFAP1Q8N556 730 aa26.56■■□□□ 1.84
CCHCR1-214ENST00000486060 HECW2Q9P2P5 1572 aa26.54■■□□□ 1.84
CCHCR1-214ENST00000486060 SUPT6HQ7KZ85 1726 aaKnown RBP26.54■■□□□ 1.84
CCHCR1-214ENST00000486060 MADDQ8WXG6 1647 aa26.52■■□□□ 1.84
CCHCR1-214ENST00000486060 SYCP2Q9BX26 1530 aa26.52■■□□□ 1.84
CCHCR1-214ENST00000486060 KIDINS220Q9ULH0 1771 aa26.51■■□□□ 1.83
CCHCR1-214ENST00000486060 ABCA6Q8N139 1617 aa26.51■■□□□ 1.83
CCHCR1-214ENST00000486060 CCNB3Q8WWL7 1395 aa26.51■■□□□ 1.83
CCHCR1-214ENST00000486060 DIP2CQ9Y2E4 1556 aa26.5■■□□□ 1.83
CCHCR1-214ENST00000486060 ZNF777Q9ULD5 760 aaPredicted RBP26.48■■□□□ 1.83
CCHCR1-214ENST00000486060 ATP10AO60312 1499 aa26.48■■□□□ 1.83
CCHCR1-214ENST00000486060 NCOA2Q15596 1464 aa26.48■■□□□ 1.83
CCHCR1-214ENST00000486060 LRRC9Q6ZRR7 1453 aa26.48■■□□□ 1.83
CCHCR1-214ENST00000486060 MAP3K1Q13233 1512 aa26.47■■□□□ 1.83
CCHCR1-214ENST00000486060 MLH3Q9UHC1 1453 aa26.47■■□□□ 1.83
CCHCR1-214ENST00000486060 ARID4BQ4LE39 1312 aaPredicted RBP26.46■■□□□ 1.83
CCHCR1-214ENST00000486060 RIMS1Q86UR5 1692 aaKnown RBP26.45■■□□□ 1.82
CCHCR1-214ENST00000486060 CFDP1Q9UEE9 299 aaPredicted RBP26.45■■□□□ 1.82
CCHCR1-214ENST00000486060 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
CCHCR1-214ENST00000486060 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
CCHCR1-214ENST00000486060 KANK4Q5T7N3 995 aaPredicted RBP26.42■■□□□ 1.82
CCHCR1-214ENST00000486060 PTPRMP28827 1452 aa26.42■■□□□ 1.82
CCHCR1-214ENST00000486060 REREQ9P2R6 1566 aa26.41■■□□□ 1.82
CCHCR1-214ENST00000486060 ZNF644Q9H582 1327 aaPredicted RBP26.41■■□□□ 1.82
CCHCR1-214ENST00000486060 KIAA1107Q9UPP5 1409 aa26.41■■□□□ 1.82
CCHCR1-214ENST00000486060 FER1L4A9Z1Z3 1794 aa26.41■■□□□ 1.82
CCHCR1-214ENST00000486060 PLEKHH2Q8IVE3 1493 aa26.39■■□□□ 1.82
CCHCR1-214ENST00000486060 INO80Q9ULG1 1556 aaPredicted RBP26.38■■□□□ 1.81
CCHCR1-214ENST00000486060 MBD5Q9P267 1494 aa26.36■■□□□ 1.81
CCHCR1-214ENST00000486060 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
CCHCR1-214ENST00000486060 MYT1LQ9UL68 1186 aa26.33■■□□□ 1.81
CCHCR1-214ENST00000486060 CAMSAP2Q08AD1 1489 aa26.32■■□□□ 1.8
CCHCR1-214ENST00000486060 MLECQ14165 292 aa26.32■■□□□ 1.8
CCHCR1-214ENST00000486060 AGLP35573 1532 aa26.3■■□□□ 1.8
CCHCR1-214ENST00000486060 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
CCHCR1-214ENST00000486060 ADGBQ8N7X0 1667 aa26.26■■□□□ 1.79
CCHCR1-214ENST00000486060 PLXNC1O60486 1568 aa26.25■■□□□ 1.79
CCHCR1-214ENST00000486060 ARHGEF5Q12774 1597 aa26.23■■□□□ 1.79
CCHCR1-214ENST00000486060 MYOM3Q5VTT5 1437 aa26.22■■□□□ 1.79
CCHCR1-214ENST00000486060 CCDC141Q6ZP82 1450 aa26.21■■□□□ 1.79
CCHCR1-214ENST00000486060 A2MP01023 1474 aa26.18■■□□□ 1.78
CCHCR1-214ENST00000486060 RTEL1-TNFRSF6BF6WH68 1400 aa26.17■■□□□ 1.78
CCHCR1-214ENST00000486060 C3P01024 1663 aa26.17■■□□□ 1.78
CCHCR1-214ENST00000486060 MIA2Q96PC5 1412 aa26.16■■□□□ 1.78
CCHCR1-214ENST00000486060 APLP2Q06481 763 aa26.15■■□□□ 1.78
CCHCR1-214ENST00000486060 PLPPR3Q6T4P5 718 aa26.14■■□□□ 1.78
CCHCR1-214ENST00000486060 LMTK3Q96Q04 1460 aa26.13■■□□□ 1.77
CCHCR1-214ENST00000486060 PTPN23Q9H3S7 1636 aa26.13■■□□□ 1.77
CCHCR1-214ENST00000486060 CEBPAP49715 358 aaPredicted RBP26.11■■□□□ 1.77
CCHCR1-214ENST00000486060 MAST1Q9Y2H9 1570 aa26.11■■□□□ 1.77
CCHCR1-214ENST00000486060 CROCC2H7BZ55 1655 aa26.09■■□□□ 1.77
CCHCR1-214ENST00000486060 RSPH4AQ5TD94 716 aa26.09■■□□□ 1.77
CCHCR1-214ENST00000486060 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
CCHCR1-214ENST00000486060 CLTCQ00610 1675 aaKnown RBP26.09■■□□□ 1.77
CCHCR1-214ENST00000486060 SETD1BQ9UPS6 1966 aaKnown RBP26.08■■□□□ 1.77
CCHCR1-214ENST00000486060 PREX1Q8TCU6 1659 aa26.06■■□□□ 1.76
CCHCR1-214ENST00000486060 DHX29Q7Z478 1369 aaKnown RBP26.05■■□□□ 1.76
CCHCR1-214ENST00000486060 FGD6Q6ZV73 1430 aa26.05■■□□□ 1.76
CCHCR1-214ENST00000486060 TCOF1Q13428 1488 aaKnown RBP26.04■■□□□ 1.76
CCHCR1-214ENST00000486060 DNMT1P26358 1616 aaKnown RBP26.02■■□□□ 1.76
CCHCR1-214ENST00000486060 CNTLNQ9NXG0 1405 aa26■■□□□ 1.75
CCHCR1-214ENST00000486060 ABCC5O15440 1437 aa25.99■■□□□ 1.75
CCHCR1-214ENST00000486060 TSPY4P0CV99 314 aa25.99■■□□□ 1.75
CCHCR1-214ENST00000486060 TSPY10P0CW01 314 aa25.99■■□□□ 1.75
CCHCR1-214ENST00000486060 GGT6Q6P531 493 aa25.97■■□□□ 1.75
CCHCR1-214ENST00000486060 HSPA2P54652 639 aa25.95■■□□□ 1.74
CCHCR1-214ENST00000486060 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
CCHCR1-214ENST00000486060 ESF1Q9H501 851 aaKnown RBP25.94■■□□□ 1.74
CCHCR1-214ENST00000486060 DAPK1P53355 1430 aa25.94■■□□□ 1.74
CCHCR1-214ENST00000486060 ZMYM3Q14202 1370 aa25.94■■□□□ 1.74
CCHCR1-214ENST00000486060 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
CCHCR1-214ENST00000486060 EIF2AK4Q9P2K8 1649 aaKnown RBP25.92■■□□□ 1.74
CCHCR1-214ENST00000486060 KIF3BO15066 747 aa25.92■■□□□ 1.74
CCHCR1-214ENST00000486060 MROH1Q8NDA8 1641 aa25.9■■□□□ 1.74
CCHCR1-214ENST00000486060 STRCQ7RTU9 1775 aa25.88■■□□□ 1.73
CCHCR1-214ENST00000486060 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms