RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 MS4A4AQ96JQ5 239 aa11.98□□□□□ -0.49
PHC3-211ENST00000486042 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
PHC3-211ENST00000486042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
PHC3-211ENST00000486042 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
PHC3-211ENST00000486042 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
PHC3-211ENST00000486042 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
PHC3-211ENST00000486042 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
PHC3-211ENST00000486042 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
PHC3-211ENST00000486042 NLRP6P59044 892 aa11.88□□□□□ -0.51
PHC3-211ENST00000486042 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
PHC3-211ENST00000486042 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
PHC3-211ENST00000486042 LSM11P83369 360 aaKnown RBP eCLIP11.82□□□□□ -0.52
PHC3-211ENST00000486042 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
PHC3-211ENST00000486042 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.522e-8■■■■□ 22
PHC3-211ENST00000486042 PBX2P40425 430 aa11.79□□□□□ -0.52
PHC3-211ENST00000486042 KIF3CO14782 793 aa11.77□□□□□ -0.53
PHC3-211ENST00000486042 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
PHC3-211ENST00000486042 SLC34A2O95436 690 aa11.73□□□□□ -0.53
PHC3-211ENST00000486042 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
PHC3-211ENST00000486042 NUDT7P0C024 238 aa11.72□□□□□ -0.53
PHC3-211ENST00000486042 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
PHC3-211ENST00000486042 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
PHC3-211ENST00000486042 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
PHC3-211ENST00000486042 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
PHC3-211ENST00000486042 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
PHC3-211ENST00000486042 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
PHC3-211ENST00000486042 STK25O00506 426 aa11.64□□□□□ -0.55
PHC3-211ENST00000486042 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
PHC3-211ENST00000486042 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
PHC3-211ENST00000486042 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
PHC3-211ENST00000486042 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
PHC3-211ENST00000486042 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
PHC3-211ENST00000486042 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
PHC3-211ENST00000486042 TK2O00142 265 aa11.57□□□□□ -0.56
PHC3-211ENST00000486042 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
PHC3-211ENST00000486042 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
PHC3-211ENST00000486042 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
PHC3-211ENST00000486042 HRO43593 1189 aa11.51□□□□□ -0.57
PHC3-211ENST00000486042 PPP1R37O75864 691 aa11.46□□□□□ -0.57
PHC3-211ENST00000486042 FOXK1P85037 733 aa11.45□□□□□ -0.58
PHC3-211ENST00000486042 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
PHC3-211ENST00000486042 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
PHC3-211ENST00000486042 TBC1D12O60347 775 aa11.44□□□□□ -0.58
PHC3-211ENST00000486042 PSEN2P49810 448 aa11.44□□□□□ -0.58
PHC3-211ENST00000486042 RGL2O15211 777 aa11.43□□□□□ -0.58
PHC3-211ENST00000486042 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
PHC3-211ENST00000486042 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
PHC3-211ENST00000486042 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
PHC3-211ENST00000486042 PKD2Q13563 968 aa11.4□□□□□ -0.58
PHC3-211ENST00000486042 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
PHC3-211ENST00000486042 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
PHC3-211ENST00000486042 DSG2Q14126 1118 aa11.34□□□□□ -0.59
PHC3-211ENST00000486042 RGS20O76081 388 aa11.33□□□□□ -0.6
PHC3-211ENST00000486042 KCNK17Q96T54 332 aa11.33□□□□□ -0.6
PHC3-211ENST00000486042 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
PHC3-211ENST00000486042 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
PHC3-211ENST00000486042 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
PHC3-211ENST00000486042 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
PHC3-211ENST00000486042 PTPN5P54829 565 aa11.27□□□□□ -0.61
PHC3-211ENST00000486042 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
PHC3-211ENST00000486042 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
PHC3-211ENST00000486042 BHMG1C9JSJ3 638 aaPredicted RBP11.24□□□□□ -0.61
PHC3-211ENST00000486042 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
PHC3-211ENST00000486042 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
PHC3-211ENST00000486042 PTPREP23469 700 aa11.2□□□□□ -0.62
PHC3-211ENST00000486042 FOSBP53539 338 aa11.2□□□□□ -0.62
PHC3-211ENST00000486042 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
PHC3-211ENST00000486042 UPF1Q92900 1129 aaKnown RBP eCLIP11.19□□□□□ -0.62
PHC3-211ENST00000486042 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
PHC3-211ENST00000486042 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
PHC3-211ENST00000486042 A0A0G2JS52 829 aa11.17□□□□□ -0.62
PHC3-211ENST00000486042 MRPL50Q8N5N7 158 aaKnown RBP11.17□□□□□ -0.62
PHC3-211ENST00000486042 WNT2BQ93097 391 aa11.17□□□□□ -0.62
PHC3-211ENST00000486042 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
PHC3-211ENST00000486042 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
PHC3-211ENST00000486042 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
PHC3-211ENST00000486042 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
PHC3-211ENST00000486042 PPP1R15BQ5SWA1 713 aa11.14□□□□□ -0.63
PHC3-211ENST00000486042 JPH4Q96JJ6 628 aa11.14□□□□□ -0.63
PHC3-211ENST00000486042 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
PHC3-211ENST00000486042 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
PHC3-211ENST00000486042 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
PHC3-211ENST00000486042 PDE4AP27815 886 aa11.1□□□□□ -0.63
PHC3-211ENST00000486042 EVI5O60447 810 aa11.08□□□□□ -0.64
PHC3-211ENST00000486042 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
PHC3-211ENST00000486042 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
PHC3-211ENST00000486042 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
PHC3-211ENST00000486042 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
PHC3-211ENST00000486042 ITGBL1O95965 494 aaPredicted RBP11.03□□□□□ -0.64
PHC3-211ENST00000486042 PPP1R3GB7ZBB8 358 aa11.02□□□□□ -0.65
PHC3-211ENST00000486042 ANKK1Q8NFD2 765 aa11.02□□□□□ -0.65
PHC3-211ENST00000486042 MAP3K9P80192 1104 aa11□□□□□ -0.65
PHC3-211ENST00000486042 NYAP1Q6ZVC0 841 aa10.99□□□□□ -0.65
PHC3-211ENST00000486042 LAPTM4BQ86VI4 370 aa10.99□□□□□ -0.65
PHC3-211ENST00000486042 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
PHC3-211ENST00000486042 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
PHC3-211ENST00000486042 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
PHC3-211ENST00000486042 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
PHC3-211ENST00000486042 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
PHC3-211ENST00000486042 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms