RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ARID4BQ4LE39 1312 aaPredicted RBP31.35■■■□□ 2.61
SNX5-213ENST00000486039 ARHGEF40Q8TER5 1519 aa31.34■■■□□ 2.61
SNX5-213ENST00000486039 SCAPERQ9BY12 1400 aa31.33■■■□□ 2.61
SNX5-213ENST00000486039 BCORL1Q5H9F3 1711 aa31.31■■■□□ 2.6
SNX5-213ENST00000486039 ARHGAP5Q13017 1502 aa31.3■■■□□ 2.6
SNX5-213ENST00000486039 ZMYM4Q5VZL5 1548 aa31.29■■■□□ 2.6
SNX5-213ENST00000486039 PTPRMP28827 1452 aa31.29■■■□□ 2.6
SNX5-213ENST00000486039 POGZQ7Z3K3 1410 aa31.27■■■□□ 2.6
SNX5-213ENST00000486039 CDC42BPBQ9Y5S2 1711 aa31.26■■■□□ 2.59
SNX5-213ENST00000486039 MAGI2Q86UL8 1455 aa31.24■■■□□ 2.59
SNX5-213ENST00000486039 ZFYVE16Q7Z3T8 1539 aa31.24■■■□□ 2.59
SNX5-213ENST00000486039 PREX2Q70Z35 1606 aa31.23■■■□□ 2.59
SNX5-213ENST00000486039 YEATS2Q9ULM3 1422 aa31.23■■■□□ 2.59
SNX5-213ENST00000486039 MADDQ8WXG6 1647 aa31.22■■■□□ 2.59
SNX5-213ENST00000486039 MTUS2Q5JR59 1369 aa31.2■■■□□ 2.59
SNX5-213ENST00000486039 CDC42BPAQ5VT25 1732 aa31.18■■■□□ 2.58
SNX5-213ENST00000486039 GPATCH8Q9UKJ3 1502 aaKnown RBP31.17■■■□□ 2.58
SNX5-213ENST00000486039 VPS8Q8N3P4 1428 aa31.16■■■□□ 2.58
SNX5-213ENST00000486039 AFAP1Q8N556 730 aa31.15■■■□□ 2.58
SNX5-213ENST00000486039 ZNF518AQ6AHZ1 1483 aa31.14■■■□□ 2.57
SNX5-213ENST00000486039 ARHGEF12Q9NZN5 1544 aa31.13■■■□□ 2.57
SNX5-213ENST00000486039 ABCC1P33527 1531 aa31.12■■■□□ 2.57
SNX5-213ENST00000486039 EHBP1L1Q8N3D4 1523 aa31.12■■■□□ 2.57
SNX5-213ENST00000486039 SIGLEC1Q9BZZ2 1709 aa31.12■■■□□ 2.57
SNX5-213ENST00000486039 RIMS1Q86UR5 1692 aaKnown RBP31.1■■■□□ 2.57
SNX5-213ENST00000486039 KDM5CP41229 1560 aa31.09■■■□□ 2.57
SNX5-213ENST00000486039 CCNB3Q8WWL7 1395 aa31.09■■■□□ 2.57
SNX5-213ENST00000486039 TRAPPC8Q9Y2L5 1435 aa31.08■■■□□ 2.57
SNX5-213ENST00000486039 ZNF777Q9ULD5 760 aaPredicted RBP31.08■■■□□ 2.57
SNX5-213ENST00000486039 ATP10AO60312 1499 aa31.08■■■□□ 2.57
SNX5-213ENST00000486039 ILDR1Q86SU0 546 aaPredicted RBP31.07■■■□□ 2.56
SNX5-213ENST00000486039 MLECQ14165 292 aa31.05■■■□□ 2.56
SNX5-213ENST00000486039 CFDP1Q9UEE9 299 aaPredicted RBP31.05■■■□□ 2.56
SNX5-213ENST00000486039 TIAM1Q13009 1591 aa31.05■■■□□ 2.56
SNX5-213ENST00000486039 SAMD9LQ8IVG5 1584 aa31.05■■■□□ 2.56
SNX5-213ENST00000486039 ITSN2Q9NZM3 1697 aa31.04■■■□□ 2.56
SNX5-213ENST00000486039 C9orf84Q5VXU9 1444 aa31.04■■■□□ 2.56
SNX5-213ENST00000486039 MLH3Q9UHC1 1453 aa31■■■□□ 2.55
SNX5-213ENST00000486039 MYT1LQ9UL68 1186 aa30.99■■■□□ 2.55
SNX5-213ENST00000486039 LMTK3Q96Q04 1460 aa30.97■■■□□ 2.55
SNX5-213ENST00000486039 HNRNPMP52272 730 aaKnown RBP eCLIP30.97■■■□□ 2.55
SNX5-213ENST00000486039 PLPPR3Q6T4P5 718 aa30.97■■■□□ 2.55
SNX5-213ENST00000486039 SYCP2Q9BX26 1530 aa30.97■■■□□ 2.55
SNX5-213ENST00000486039 NCOA2Q15596 1464 aa30.95■■■□□ 2.55
SNX5-213ENST00000486039 KIAA1107Q9UPP5 1409 aa30.95■■■□□ 2.54
SNX5-213ENST00000486039 LRRC9Q6ZRR7 1453 aa30.95■■■□□ 2.54
SNX5-213ENST00000486039 FER1L4A9Z1Z3 1794 aa30.94■■■□□ 2.54
SNX5-213ENST00000486039 DIP2CQ9Y2E4 1556 aa30.94■■■□□ 2.54
SNX5-213ENST00000486039 PLEKHH2Q8IVE3 1493 aa30.93■■■□□ 2.54
SNX5-213ENST00000486039 SUPT6HQ7KZ85 1726 aaKnown RBP30.93■■■□□ 2.54
SNX5-213ENST00000486039 KANK4Q5T7N3 995 aaPredicted RBP30.92■■■□□ 2.54
SNX5-213ENST00000486039 MAP3K1Q13233 1512 aa30.92■■■□□ 2.54
SNX5-213ENST00000486039 ZNF644Q9H582 1327 aaPredicted RBP30.92■■■□□ 2.54
SNX5-213ENST00000486039 ABCA6Q8N139 1617 aa30.91■■■□□ 2.54
SNX5-213ENST00000486039 KIDINS220Q9ULH0 1771 aa30.88■■■□□ 2.53
SNX5-213ENST00000486039 REREQ9P2R6 1566 aa30.86■■■□□ 2.53
SNX5-213ENST00000486039 SPAG9O60271 1321 aaKnown RBP30.85■■■□□ 2.53
SNX5-213ENST00000486039 MBD5Q9P267 1494 aa30.83■■■□□ 2.53
SNX5-213ENST00000486039 HSPA2P54652 639 aa30.82■■■□□ 2.52
SNX5-213ENST00000486039 CEBPAP49715 358 aaPredicted RBP30.78■■■□□ 2.52
SNX5-213ENST00000486039 AGLP35573 1532 aa30.77■■■□□ 2.52
SNX5-213ENST00000486039 ATP7AQ04656 1500 aa30.77■■■□□ 2.52
SNX5-213ENST00000486039 INO80Q9ULG1 1556 aaPredicted RBP30.76■■■□□ 2.52
SNX5-213ENST00000486039 APLP2Q06481 763 aa30.76■■■□□ 2.51
SNX5-213ENST00000486039 CAMSAP2Q08AD1 1489 aa30.76■■■□□ 2.51
SNX5-213ENST00000486039 PREX1Q8TCU6 1659 aa30.68■■■□□ 2.5
SNX5-213ENST00000486039 CCDC141Q6ZP82 1450 aa30.68■■■□□ 2.5
SNX5-213ENST00000486039 RTEL1-TNFRSF6BF6WH68 1400 aa30.67■■■□□ 2.5
SNX5-213ENST00000486039 MYOM3Q5VTT5 1437 aa30.67■■■□□ 2.5
SNX5-213ENST00000486039 RSPH4AQ5TD94 716 aa30.67■■■□□ 2.5
SNX5-213ENST00000486039 FBXO41Q8TF61 875 aa30.67■■■□□ 2.5
SNX5-213ENST00000486039 ESF1Q9H501 851 aaKnown RBP30.67■■■□□ 2.5
SNX5-213ENST00000486039 A2MP01023 1474 aa30.66■■■□□ 2.5
SNX5-213ENST00000486039 MIA2Q96PC5 1412 aa30.64■■■□□ 2.49
SNX5-213ENST00000486039 PLXNC1O60486 1568 aa30.63■■■□□ 2.49
SNX5-213ENST00000486039 ARHGEF5Q12774 1597 aa30.62■■■□□ 2.49
SNX5-213ENST00000486039 C3P01024 1663 aa30.6■■■□□ 2.49
SNX5-213ENST00000486039 UHRF1BP1Q6BDS2 1440 aa30.6■■■□□ 2.49
SNX5-213ENST00000486039 SETD1BQ9UPS6 1966 aaKnown RBP30.59■■■□□ 2.49
SNX5-213ENST00000486039 CNTLNQ9NXG0 1405 aa30.58■■■□□ 2.49
SNX5-213ENST00000486039 ADGBQ8N7X0 1667 aa30.58■■■□□ 2.49
SNX5-213ENST00000486039 TSPY4P0CV99 314 aa30.55■■■□□ 2.48
SNX5-213ENST00000486039 TSPY10P0CW01 314 aa30.55■■■□□ 2.48
SNX5-213ENST00000486039 DHX29Q7Z478 1369 aaKnown RBP30.54■■■□□ 2.48
SNX5-213ENST00000486039 GGT6Q6P531 493 aa30.5■■■□□ 2.47
SNX5-213ENST00000486039 DMRT2Q9Y5R5 561 aa30.47■■■□□ 2.47
SNX5-213ENST00000486039 MROH2AA6NES4 1674 aa30.46■■■□□ 2.47
SNX5-213ENST00000486039 MAST1Q9Y2H9 1570 aa30.46■■■□□ 2.47
SNX5-213ENST00000486039 ZMYM3Q14202 1370 aa30.46■■■□□ 2.47
SNX5-213ENST00000486039 PTPN23Q9H3S7 1636 aa30.46■■■□□ 2.47
SNX5-213ENST00000486039 FGD6Q6ZV73 1430 aa30.46■■■□□ 2.47
SNX5-213ENST00000486039 STRCQ7RTU9 1775 aa30.46■■■□□ 2.47
SNX5-213ENST00000486039 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
SNX5-213ENST00000486039 NPATQ14207 1427 aa30.42■■■□□ 2.46
SNX5-213ENST00000486039 KIF3BO15066 747 aa30.42■■■□□ 2.46
SNX5-213ENST00000486039 PPP6R1Q9UPN7 881 aa30.42■■■□□ 2.46
SNX5-213ENST00000486039 TCOF1Q13428 1488 aaKnown RBP30.42■■■□□ 2.46
SNX5-213ENST00000486039 ABCC5O15440 1437 aa30.4■■■□□ 2.46
SNX5-213ENST00000486039 CLTCQ00610 1675 aaKnown RBP30.39■■■□□ 2.45
SNX5-213ENST00000486039 PTPRTO14522 1441 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms