RNA–Protein interactions for RNA: ENST00000486007.1

NDUFA4-205, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 434 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-205ENST00000486007 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
NDUFA4-205ENST00000486007 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
NDUFA4-205ENST00000486007 MFRPQ9BY79 579 aa11.51□□□□□ -0.57
NDUFA4-205ENST00000486007 EMP3P54852 163 aa11.5□□□□□ -0.57
NDUFA4-205ENST00000486007 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
NDUFA4-205ENST00000486007 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
NDUFA4-205ENST00000486007 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
NDUFA4-205ENST00000486007 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
NDUFA4-205ENST00000486007 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
NDUFA4-205ENST00000486007 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
NDUFA4-205ENST00000486007 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
NDUFA4-205ENST00000486007 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
NDUFA4-205ENST00000486007 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
NDUFA4-205ENST00000486007 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
NDUFA4-205ENST00000486007 CC2D2AQ9P2K1 1620 aa11.37□□□□□ -0.59
NDUFA4-205ENST00000486007 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
NDUFA4-205ENST00000486007 DCAF1Q9Y4B6 1507 aa11.34□□□□□ -0.59
NDUFA4-205ENST00000486007 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
NDUFA4-205ENST00000486007 ERBB3P21860 1342 aa11.33□□□□□ -0.6
NDUFA4-205ENST00000486007 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
NDUFA4-205ENST00000486007 KIF3CO14782 793 aa11.31□□□□□ -0.6
NDUFA4-205ENST00000486007 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
NDUFA4-205ENST00000486007 ZCCHC6Q5VYS8 1495 aaKnown RBP11.31□□□□□ -0.6
NDUFA4-205ENST00000486007 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
NDUFA4-205ENST00000486007 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
NDUFA4-205ENST00000486007 EIF4G1Q04637 1599 aaKnown RBP11.29□□□□□ -0.6
NDUFA4-205ENST00000486007 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
NDUFA4-205ENST00000486007 RYDENQ9NUL5 291 aaKnown RBP11.28□□□□□ -0.6
NDUFA4-205ENST00000486007 PPP1R37O75864 691 aa11.27□□□□□ -0.61
NDUFA4-205ENST00000486007 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
NDUFA4-205ENST00000486007 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
NDUFA4-205ENST00000486007 SCRIBQ14160 1630 aa11.25□□□□□ -0.61
NDUFA4-205ENST00000486007 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
NDUFA4-205ENST00000486007 KRTAP3-3Q9BYR6 98 aa11.25□□□□□ -0.61
NDUFA4-205ENST00000486007 KRTAP3-2Q9BYR7 98 aa11.25□□□□□ -0.61
NDUFA4-205ENST00000486007 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
NDUFA4-205ENST00000486007 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
NDUFA4-205ENST00000486007 SLC34A2O95436 690 aa11.21□□□□□ -0.61
NDUFA4-205ENST00000486007 ZNF687Q8N1G0 1237 aa11.18□□□□□ -0.62
NDUFA4-205ENST00000486007 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
NDUFA4-205ENST00000486007 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
NDUFA4-205ENST00000486007 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
NDUFA4-205ENST00000486007 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.62
NDUFA4-205ENST00000486007 PCDHGA4Q9Y5G9 962 aa11.15□□□□□ -0.62
NDUFA4-205ENST00000486007 FOXK1P85037 733 aa11.14□□□□□ -0.63
NDUFA4-205ENST00000486007 NUDT7P0C024 238 aa11.12□□□□□ -0.63
NDUFA4-205ENST00000486007 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
NDUFA4-205ENST00000486007 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
NDUFA4-205ENST00000486007 DSG2Q14126 1118 aa11.07□□□□□ -0.64
NDUFA4-205ENST00000486007 PSDA5PKW4 1024 aaPredicted RBP11.06□□□□□ -0.64
NDUFA4-205ENST00000486007 TBC1D12O60347 775 aa11.06□□□□□ -0.64
NDUFA4-205ENST00000486007 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
NDUFA4-205ENST00000486007 PBX2P40425 430 aa11.05□□□□□ -0.64
NDUFA4-205ENST00000486007 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
NDUFA4-205ENST00000486007 PTGER2P43116 358 aa11.04□□□□□ -0.64
NDUFA4-205ENST00000486007 CRISPLD2Q9H0B8 497 aa11.03□□□□□ -0.64
NDUFA4-205ENST00000486007 PDE4AP27815 886 aa11.01□□□□□ -0.65
NDUFA4-205ENST00000486007 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
NDUFA4-205ENST00000486007 KDM4FA0A1W2PPD8 638 aa10.99□□□□□ -0.65
NDUFA4-205ENST00000486007 PPP1R15BQ5SWA1 713 aa10.99□□□□□ -0.65
NDUFA4-205ENST00000486007 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
NDUFA4-205ENST00000486007 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
NDUFA4-205ENST00000486007 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
NDUFA4-205ENST00000486007 CUX2O14529 1486 aa10.96□□□□□ -0.65
NDUFA4-205ENST00000486007 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
NDUFA4-205ENST00000486007 OXER1Q8TDS5 423 aa10.95□□□□□ -0.66
NDUFA4-205ENST00000486007 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
NDUFA4-205ENST00000486007 ARHGAP33O14559 1287 aa10.93□□□□□ -0.66
NDUFA4-205ENST00000486007 UPF1Q92900 1129 aaKnown RBP eCLIP10.92□□□□□ -0.66
NDUFA4-205ENST00000486007 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
NDUFA4-205ENST00000486007 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
NDUFA4-205ENST00000486007 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
NDUFA4-205ENST00000486007 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
NDUFA4-205ENST00000486007 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
NDUFA4-205ENST00000486007 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
NDUFA4-205ENST00000486007 ERCC6Q03468 1493 aa10.88□□□□□ -0.67
NDUFA4-205ENST00000486007 MFSD10Q14728 455 aa10.88□□□□□ -0.67
NDUFA4-205ENST00000486007 BBXQ8WY36 941 aaPredicted RBP10.88□□□□□ -0.67
NDUFA4-205ENST00000486007 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
NDUFA4-205ENST00000486007 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
NDUFA4-205ENST00000486007 TK2O00142 265 aa10.84□□□□□ -0.67
NDUFA4-205ENST00000486007 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
NDUFA4-205ENST00000486007 EVI5O60447 810 aa10.81□□□□□ -0.68
NDUFA4-205ENST00000486007 PSEN2P49810 448 aa10.81□□□□□ -0.68
NDUFA4-205ENST00000486007 MAP3K9P80192 1104 aa10.81□□□□□ -0.68
NDUFA4-205ENST00000486007 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
NDUFA4-205ENST00000486007 CADPS2Q86UW7 1296 aa10.8□□□□□ -0.68
NDUFA4-205ENST00000486007 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
NDUFA4-205ENST00000486007 FOSBP53539 338 aa10.79□□□□□ -0.68
NDUFA4-205ENST00000486007 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
NDUFA4-205ENST00000486007 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
NDUFA4-205ENST00000486007 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
NDUFA4-205ENST00000486007 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
NDUFA4-205ENST00000486007 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
NDUFA4-205ENST00000486007 SMARCA2P51531 1590 aa10.78□□□□□ -0.68
NDUFA4-205ENST00000486007 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
NDUFA4-205ENST00000486007 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
NDUFA4-205ENST00000486007 STAC3Q96MF2 364 aa10.76□□□□□ -0.69
NDUFA4-205ENST00000486007 RTN4Q9NQC3 1192 aaKnown RBP10.76□□□□□ -0.69
NDUFA4-205ENST00000486007 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms