RNA–Protein interactions for RNA: ENST00000485798.5

NUCB1-211, Transcript of nucleobindin 1, humanhuman

TSL 3

Gene NUCB1, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-211ENST00000485798 TIAM1Q13009 1591 aa24.15■■□□□ 1.46
NUCB1-211ENST00000485798 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
NUCB1-211ENST00000485798 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
NUCB1-211ENST00000485798 MAP3K1Q13233 1512 aa24.12■■□□□ 1.45
NUCB1-211ENST00000485798 MTUS2Q5JR59 1369 aa24.12■■□□□ 1.45
NUCB1-211ENST00000485798 ADGRL1O94910 1474 aa24.12■■□□□ 1.45
NUCB1-211ENST00000485798 ZMYM4Q5VZL5 1548 aa24.11■■□□□ 1.45
NUCB1-211ENST00000485798 EFCAB2Q5VUJ9 269 aa24.1■■□□□ 1.45
NUCB1-211ENST00000485798 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
NUCB1-211ENST00000485798 POGZQ7Z3K3 1410 aa24.06■■□□□ 1.44
NUCB1-211ENST00000485798 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
NUCB1-211ENST00000485798 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
NUCB1-211ENST00000485798 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
NUCB1-211ENST00000485798 ABCC1P33527 1531 aa24.05■■□□□ 1.44
NUCB1-211ENST00000485798 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
NUCB1-211ENST00000485798 GPATCH8Q9UKJ3 1502 aaKnown RBP24.05■■□□□ 1.44
NUCB1-211ENST00000485798 MAGI2Q86UL8 1455 aa24.02■■□□□ 1.44
NUCB1-211ENST00000485798 KDM5CP41229 1560 aa24.02■■□□□ 1.44
NUCB1-211ENST00000485798 ZNF518AQ6AHZ1 1483 aa24■■□□□ 1.43
NUCB1-211ENST00000485798 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
NUCB1-211ENST00000485798 SAMD9LQ8IVG5 1584 aa23.99■■□□□ 1.43
NUCB1-211ENST00000485798 CCNB3Q8WWL7 1395 aa23.99■■□□□ 1.43
NUCB1-211ENST00000485798 ZFYVE16Q7Z3T8 1539 aa23.97■■□□□ 1.43
NUCB1-211ENST00000485798 NCOA2Q15596 1464 aa23.96■■□□□ 1.43
NUCB1-211ENST00000485798 HECW2Q9P2P5 1572 aa23.94■■□□□ 1.42
NUCB1-211ENST00000485798 ARHGEF12Q9NZN5 1544 aa23.94■■□□□ 1.42
NUCB1-211ENST00000485798 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
NUCB1-211ENST00000485798 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
NUCB1-211ENST00000485798 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
NUCB1-211ENST00000485798 MLH3Q9UHC1 1453 aa23.89■■□□□ 1.42
NUCB1-211ENST00000485798 CFDP1Q9UEE9 299 aaPredicted RBP23.89■■□□□ 1.41
NUCB1-211ENST00000485798 YEATS2Q9ULM3 1422 aa23.89■■□□□ 1.41
NUCB1-211ENST00000485798 TRAPPC8Q9Y2L5 1435 aa23.87■■□□□ 1.41
NUCB1-211ENST00000485798 BCORL1Q5H9F3 1711 aa23.86■■□□□ 1.41
NUCB1-211ENST00000485798 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
NUCB1-211ENST00000485798 SIGLEC1Q9BZZ2 1709 aa23.84■■□□□ 1.41
NUCB1-211ENST00000485798 KIDINS220Q9ULH0 1771 aa23.84■■□□□ 1.41
NUCB1-211ENST00000485798 ADAMTSL3P82987 1691 aa23.84■■□□□ 1.41
NUCB1-211ENST00000485798 DIP2CQ9Y2E4 1556 aa23.84■■□□□ 1.41
NUCB1-211ENST00000485798 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
NUCB1-211ENST00000485798 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
NUCB1-211ENST00000485798 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
NUCB1-211ENST00000485798 ATP10AO60312 1499 aa23.82■■□□□ 1.4
NUCB1-211ENST00000485798 APLP2Q06481 763 aa23.82■■□□□ 1.4
NUCB1-211ENST00000485798 C9orf84Q5VXU9 1444 aa23.82■■□□□ 1.4
NUCB1-211ENST00000485798 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
NUCB1-211ENST00000485798 INO80Q9ULG1 1556 aaPredicted RBP23.81■■□□□ 1.4
NUCB1-211ENST00000485798 CAMSAP2Q08AD1 1489 aa23.8■■□□□ 1.4
NUCB1-211ENST00000485798 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
NUCB1-211ENST00000485798 MYOM3Q5VTT5 1437 aa23.78■■□□□ 1.4
NUCB1-211ENST00000485798 MIA2Q96PC5 1412 aa23.77■■□□□ 1.4
NUCB1-211ENST00000485798 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
NUCB1-211ENST00000485798 ATP7AQ04656 1500 aa23.76■■□□□ 1.39
NUCB1-211ENST00000485798 HNRNPMP52272 730 aaKnown RBP eCLIP23.74■■□□□ 1.39
NUCB1-211ENST00000485798 ZNF644Q9H582 1327 aaPredicted RBP23.74■■□□□ 1.39
NUCB1-211ENST00000485798 AGLP35573 1532 aa23.73■■□□□ 1.39
NUCB1-211ENST00000485798 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
NUCB1-211ENST00000485798 CCDC141Q6ZP82 1450 aa23.72■■□□□ 1.39
NUCB1-211ENST00000485798 SPAG9O60271 1321 aaKnown RBP23.71■■□□□ 1.39
NUCB1-211ENST00000485798 ADGBQ8N7X0 1667 aa23.7■■□□□ 1.39
NUCB1-211ENST00000485798 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
NUCB1-211ENST00000485798 ARID4BQ4LE39 1312 aaPredicted RBP23.7■■□□□ 1.38
NUCB1-211ENST00000485798 RSPH4AQ5TD94 716 aa23.69■■□□□ 1.38
NUCB1-211ENST00000485798 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
NUCB1-211ENST00000485798 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
NUCB1-211ENST00000485798 MYT1LQ9UL68 1186 aa23.66■■□□□ 1.38
NUCB1-211ENST00000485798 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
NUCB1-211ENST00000485798 MAST1Q9Y2H9 1570 aa23.65■■□□□ 1.38
NUCB1-211ENST00000485798 RIMS1Q86UR5 1692 aaKnown RBP23.65■■□□□ 1.38
NUCB1-211ENST00000485798 PTPRMP28827 1452 aa23.64■■□□□ 1.38
NUCB1-211ENST00000485798 FGD6Q6ZV73 1430 aa23.63■■□□□ 1.37
NUCB1-211ENST00000485798 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
NUCB1-211ENST00000485798 CROCC2H7BZ55 1655 aa23.62■■□□□ 1.37
NUCB1-211ENST00000485798 A2MP01023 1474 aa23.61■■□□□ 1.37
NUCB1-211ENST00000485798 DNMT1P26358 1616 aaKnown RBP23.57■■□□□ 1.36
NUCB1-211ENST00000485798 SHANK2Q9UPX8 1470 aa23.56■■□□□ 1.36
NUCB1-211ENST00000485798 FBXO41Q8TF61 875 aa23.54■■□□□ 1.36
NUCB1-211ENST00000485798 TSPY4P0CV99 314 aa23.53■■□□□ 1.36
NUCB1-211ENST00000485798 TSPY10P0CW01 314 aa23.53■■□□□ 1.36
NUCB1-211ENST00000485798 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
NUCB1-211ENST00000485798 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
NUCB1-211ENST00000485798 MLECQ14165 292 aa23.51■■□□□ 1.35
NUCB1-211ENST00000485798 ABCC5O15440 1437 aa23.49■■□□□ 1.35
NUCB1-211ENST00000485798 DAPK1P53355 1430 aa23.49■■□□□ 1.35
NUCB1-211ENST00000485798 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
NUCB1-211ENST00000485798 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
NUCB1-211ENST00000485798 C3P01024 1663 aa23.46■■□□□ 1.35
NUCB1-211ENST00000485798 FAM135AQ9P2D6 1515 aa23.46■■□□□ 1.35
NUCB1-211ENST00000485798 RNF17Q9BXT8 1623 aaKnown RBP23.43■■□□□ 1.34
NUCB1-211ENST00000485798 DUOX2Q9NRD8 1548 aa23.43■■□□□ 1.34
NUCB1-211ENST00000485798 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
NUCB1-211ENST00000485798 CLTCQ00610 1675 aaKnown RBP23.41■■□□□ 1.34
NUCB1-211ENST00000485798 PREX1Q8TCU6 1659 aa23.39■■□□□ 1.34
NUCB1-211ENST00000485798 ADGRL2O95490 1459 aa23.39■■□□□ 1.34
NUCB1-211ENST00000485798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.39■■□□□ 1.332e-6■■□□□ 13.2
NUCB1-211ENST00000485798 SETD1BQ9UPS6 1966 aaKnown RBP23.38■■□□□ 1.33
NUCB1-211ENST00000485798 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
NUCB1-211ENST00000485798 ERBINQ96RT1 1412 aa23.36■■□□□ 1.33
NUCB1-211ENST00000485798 KIF15Q9NS87 1388 aa23.36■■□□□ 1.33
NUCB1-211ENST00000485798 LMTK3Q96Q04 1460 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms