RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 GPATCH8Q9UKJ3 1502 aaKnown RBP31.11■■■□□ 2.57
COL6A2-208ENST00000485591 ARHGAP5Q13017 1502 aa31.1■■■□□ 2.57
COL6A2-208ENST00000485591 CCNB3Q8WWL7 1395 aa31.09■■■□□ 2.57
COL6A2-208ENST00000485591 KDM6BO15054 1643 aa31.05■■■□□ 2.56
COL6A2-208ENST00000485591 PHLDB1Q86UU1 1377 aa31.05■■■□□ 2.56
COL6A2-208ENST00000485591 AKNAQ7Z591 1439 aa31■■■□□ 2.55
COL6A2-208ENST00000485591 EFCAB2Q5VUJ9 269 aa31■■■□□ 2.55
COL6A2-208ENST00000485591 SAMD9LQ8IVG5 1584 aa30.97■■■□□ 2.55
COL6A2-208ENST00000485591 MYOM3Q5VTT5 1437 aa30.96■■■□□ 2.55
COL6A2-208ENST00000485591 ADGRL1O94910 1474 aa30.95■■■□□ 2.55
COL6A2-208ENST00000485591 ABCC1P33527 1531 aa30.94■■■□□ 2.54
COL6A2-208ENST00000485591 CFDP1Q9UEE9 299 aaPredicted RBP30.94■■■□□ 2.54
COL6A2-208ENST00000485591 COL17A1Q9UMD9 1497 aaPredicted RBP30.94■■■□□ 2.54
COL6A2-208ENST00000485591 RICTORQ6R327 1708 aa30.91■■■□□ 2.54
COL6A2-208ENST00000485591 MIA2Q96PC5 1412 aa30.9■■■□□ 2.54
COL6A2-208ENST00000485591 FRMPD1Q5SYB0 1578 aa30.88■■■□□ 2.53
COL6A2-208ENST00000485591 PLEKHH2Q8IVE3 1493 aa30.88■■■□□ 2.53
COL6A2-208ENST00000485591 SCAPERQ9BY12 1400 aa30.87■■■□□ 2.53
COL6A2-208ENST00000485591 DENND4BO75064 1496 aaPredicted RBP30.87■■■□□ 2.53
COL6A2-208ENST00000485591 SYCP2Q9BX26 1530 aa30.85■■■□□ 2.53
COL6A2-208ENST00000485591 CAMSAP2Q08AD1 1489 aa30.85■■■□□ 2.53
COL6A2-208ENST00000485591 PPARGC1BQ86YN6 1023 aaKnown RBP30.85■■■□□ 2.53
COL6A2-208ENST00000485591 ZNF777Q9ULD5 760 aaPredicted RBP30.84■■■□□ 2.53
COL6A2-208ENST00000485591 ARHGEF12Q9NZN5 1544 aa30.83■■■□□ 2.53
COL6A2-208ENST00000485591 POGZQ7Z3K3 1410 aa30.83■■■□□ 2.53
COL6A2-208ENST00000485591 FGD6Q6ZV73 1430 aa30.82■■■□□ 2.52
COL6A2-208ENST00000485591 KIAA1107Q9UPP5 1409 aa30.82■■■□□ 2.52
COL6A2-208ENST00000485591 PTPN23Q9H3S7 1636 aa30.82■■■□□ 2.52
COL6A2-208ENST00000485591 ZNF518AQ6AHZ1 1483 aa30.79■■■□□ 2.52
COL6A2-208ENST00000485591 ZMYM4Q5VZL5 1548 aa30.78■■■□□ 2.52
COL6A2-208ENST00000485591 KDM5CP41229 1560 aa30.78■■■□□ 2.52
COL6A2-208ENST00000485591 ZNF644Q9H582 1327 aaPredicted RBP30.77■■■□□ 2.52
COL6A2-208ENST00000485591 TCOF1Q13428 1488 aaKnown RBP30.76■■■□□ 2.52
COL6A2-208ENST00000485591 RAPGEF3O95398 923 aa30.76■■■□□ 2.51
COL6A2-208ENST00000485591 MBD5Q9P267 1494 aa30.75■■■□□ 2.51
COL6A2-208ENST00000485591 ARHGEF5Q12774 1597 aa30.75■■■□□ 2.51
COL6A2-208ENST00000485591 TRAPPC8Q9Y2L5 1435 aa30.74■■■□□ 2.51
COL6A2-208ENST00000485591 HECW2Q9P2P5 1572 aa30.7■■■□□ 2.5
COL6A2-208ENST00000485591 HNRNPMP52272 730 aaKnown RBP eCLIP30.69■■■□□ 2.5
COL6A2-208ENST00000485591 CCDC141Q6ZP82 1450 aa30.68■■■□□ 2.5
COL6A2-208ENST00000485591 MAGI2Q86UL8 1455 aa30.67■■■□□ 2.5
COL6A2-208ENST00000485591 AFAP1Q8N556 730 aa30.65■■■□□ 2.5
COL6A2-208ENST00000485591 CROCC2H7BZ55 1655 aa30.65■■■□□ 2.5
COL6A2-208ENST00000485591 ARHGEF40Q8TER5 1519 aa30.64■■■□□ 2.5
COL6A2-208ENST00000485591 INO80Q9ULG1 1556 aaPredicted RBP30.64■■■□□ 2.5
COL6A2-208ENST00000485591 DNMT1P26358 1616 aaKnown RBP30.64■■■□□ 2.5
COL6A2-208ENST00000485591 MLH3Q9UHC1 1453 aa30.63■■■□□ 2.49
COL6A2-208ENST00000485591 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
COL6A2-208ENST00000485591 KIDINS220Q9ULH0 1771 aa30.62■■■□□ 2.49
COL6A2-208ENST00000485591 RSPH4AQ5TD94 716 aa30.62■■■□□ 2.49
COL6A2-208ENST00000485591 RRBP1Q9P2E9 1410 aaKnown RBP30.62■■■□□ 2.49
COL6A2-208ENST00000485591 ATP7AQ04656 1500 aa30.59■■■□□ 2.49
COL6A2-208ENST00000485591 MAST1Q9Y2H9 1570 aa30.58■■■□□ 2.49
COL6A2-208ENST00000485591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.57■■■□□ 2.48
COL6A2-208ENST00000485591 ABCA6Q8N139 1617 aa30.56■■■□□ 2.48
COL6A2-208ENST00000485591 DAPK1P53355 1430 aa30.56■■■□□ 2.48
COL6A2-208ENST00000485591 YEATS2Q9ULM3 1422 aa30.56■■■□□ 2.48
COL6A2-208ENST00000485591 SPAG9O60271 1321 aaKnown RBP30.55■■■□□ 2.48
COL6A2-208ENST00000485591 DIP2CQ9Y2E4 1556 aa30.55■■■□□ 2.48
COL6A2-208ENST00000485591 SHANK2Q9UPX8 1470 aa30.55■■■□□ 2.48
COL6A2-208ENST00000485591 FAM50AQ14320 339 aaKnown RBP30.54■■■□□ 2.48
COL6A2-208ENST00000485591 RTEL1-TNFRSF6BF6WH68 1400 aa30.54■■■□□ 2.48
COL6A2-208ENST00000485591 ABCC5O15440 1437 aa30.54■■■□□ 2.48
COL6A2-208ENST00000485591 C9orf84Q5VXU9 1444 aa30.49■■■□□ 2.47
COL6A2-208ENST00000485591 ADGBQ8N7X0 1667 aa30.49■■■□□ 2.47
COL6A2-208ENST00000485591 REREQ9P2R6 1566 aa30.48■■■□□ 2.47
COL6A2-208ENST00000485591 PLXNC1O60486 1568 aa30.47■■■□□ 2.47
COL6A2-208ENST00000485591 TSPY4P0CV99 314 aa30.47■■■□□ 2.47
COL6A2-208ENST00000485591 TSPY10P0CW01 314 aa30.47■■■□□ 2.47
COL6A2-208ENST00000485591 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
COL6A2-208ENST00000485591 ATP10AO60312 1499 aa30.46■■■□□ 2.47
COL6A2-208ENST00000485591 SIGLEC1Q9BZZ2 1709 aa30.43■■■□□ 2.46
COL6A2-208ENST00000485591 ADGRL2O95490 1459 aa30.38■■■□□ 2.45
COL6A2-208ENST00000485591 PTPRKQ15262 1439 aa30.37■■■□□ 2.45
COL6A2-208ENST00000485591 A2MP01023 1474 aa30.36■■■□□ 2.45
COL6A2-208ENST00000485591 AGLP35573 1532 aa30.33■■■□□ 2.45
COL6A2-208ENST00000485591 ANKRD30AQ9BXX3 1397 aa30.31■■■□□ 2.44
COL6A2-208ENST00000485591 NCOA1Q15788 1441 aa30.3■■■□□ 2.44
COL6A2-208ENST00000485591 DUOX2Q9NRD8 1548 aa30.3■■■□□ 2.44
COL6A2-208ENST00000485591 CHIC2Q9UKJ5 165 aa30.29■■■□□ 2.44
COL6A2-208ENST00000485591 BCORL1Q5H9F3 1711 aa30.29■■■□□ 2.44
COL6A2-208ENST00000485591 ROCK1Q13464 1354 aa30.28■■■□□ 2.44
COL6A2-208ENST00000485591 ITGAEP38570 1179 aa30.28■■■□□ 2.44
COL6A2-208ENST00000485591 DHX29Q7Z478 1369 aaKnown RBP30.28■■■□□ 2.44
COL6A2-208ENST00000485591 KIF15Q9NS87 1388 aa30.28■■■□□ 2.44
COL6A2-208ENST00000485591 EIF2AK4Q9P2K8 1649 aaKnown RBP30.27■■■□□ 2.44
COL6A2-208ENST00000485591 ARID4BQ4LE39 1312 aaPredicted RBP30.22■■■□□ 2.43
COL6A2-208ENST00000485591 ERBINQ96RT1 1412 aa30.22■■■□□ 2.43
COL6A2-208ENST00000485591 RRP7BPQ9NSQ0 103 aa30.21■■■□□ 2.43
COL6A2-208ENST00000485591 GCC2Q8IWJ2 1684 aa30.2■■■□□ 2.42
COL6A2-208ENST00000485591 ADAMTSL3P82987 1691 aa30.19■■■□□ 2.42
COL6A2-208ENST00000485591 RNF17Q9BXT8 1623 aaKnown RBP30.17■■■□□ 2.42
COL6A2-208ENST00000485591 FER1L4A9Z1Z3 1794 aa30.14■■■□□ 2.42
COL6A2-208ENST00000485591 ANKRD50Q9ULJ7 1429 aa30.12■■■□□ 2.41
COL6A2-208ENST00000485591 DEPDC5O75140 1603 aa30.11■■■□□ 2.41
COL6A2-208ENST00000485591 MADDQ8WXG6 1647 aa30.11■■■□□ 2.41
COL6A2-208ENST00000485591 HFM1A2PYH4 1435 aa30.1■■■□□ 2.41
COL6A2-208ENST00000485591 KIF3BO15066 747 aa30.09■■■□□ 2.41
COL6A2-208ENST00000485591 MROH1Q8NDA8 1641 aa30.09■■■□□ 2.41
COL6A2-208ENST00000485591 NAIPQ13075 1403 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms