RNA–Protein interactions for RNA: ENST00000485497.2

SENP6-209, Transcript of SUMO specific peptidase 6, humanhuman

TSL 4

Gene SENP6, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-209ENST00000485497 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
SENP6-209ENST00000485497 DOK7Q18PE1 504 aa13.63□□□□□ -0.23
SENP6-209ENST00000485497 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
SENP6-209ENST00000485497 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
SENP6-209ENST00000485497 POTEMA6NI47 508 aa13.62□□□□□ -0.23
SENP6-209ENST00000485497 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
SENP6-209ENST00000485497 ZNF710Q8N1W2 664 aa13.58□□□□□ -0.24
SENP6-209ENST00000485497 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
SENP6-209ENST00000485497 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
SENP6-209ENST00000485497 GPHNQ9NQX3 736 aaPredicted RBP13.54□□□□□ -0.24
SENP6-209ENST00000485497 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
SENP6-209ENST00000485497 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
SENP6-209ENST00000485497 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
SENP6-209ENST00000485497 FOXK1P85037 733 aa13.49□□□□□ -0.25
SENP6-209ENST00000485497 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
SENP6-209ENST00000485497 EMP3P54852 163 aa13.48□□□□□ -0.25
SENP6-209ENST00000485497 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
SENP6-209ENST00000485497 PDE4AP27815 886 aa13.45□□□□□ -0.26
SENP6-209ENST00000485497 DSG2Q14126 1118 aa13.45□□□□□ -0.26
SENP6-209ENST00000485497 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
SENP6-209ENST00000485497 SLC34A2O95436 690 aa13.44□□□□□ -0.26
SENP6-209ENST00000485497 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
SENP6-209ENST00000485497 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
SENP6-209ENST00000485497 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
SENP6-209ENST00000485497 PCDH10Q9P2E7 1040 aa13.43□□□□□ -0.26
SENP6-209ENST00000485497 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
SENP6-209ENST00000485497 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
SENP6-209ENST00000485497 PPP1R15BQ5SWA1 713 aa13.39□□□□□ -0.27
SENP6-209ENST00000485497 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
SENP6-209ENST00000485497 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
SENP6-209ENST00000485497 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
SENP6-209ENST00000485497 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
SENP6-209ENST00000485497 DDX27Q96GQ7 796 aaKnown RBP13.36□□□□□ -0.27
SENP6-209ENST00000485497 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
SENP6-209ENST00000485497 MFSD10Q14728 455 aa13.35□□□□□ -0.27
SENP6-209ENST00000485497 PTCD2Q8WV60 388 aaKnown RBP13.35□□□□□ -0.27
SENP6-209ENST00000485497 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
SENP6-209ENST00000485497 ERBB3P21860 1342 aa13.34□□□□□ -0.27
SENP6-209ENST00000485497 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.286e-7■■■□□ 16.5
SENP6-209ENST00000485497 POTEB3A0JP26 581 aa13.3□□□□□ -0.28
SENP6-209ENST00000485497 POTEBQ6S5H4 581 aa13.3□□□□□ -0.28
SENP6-209ENST00000485497 TBC1D12O60347 775 aa13.29□□□□□ -0.28
SENP6-209ENST00000485497 NUDT7P0C024 238 aa13.29□□□□□ -0.28
SENP6-209ENST00000485497 VARS2Q5ST30 1063 aaKnown RBP13.28□□□□□ -0.28
SENP6-209ENST00000485497 OXER1Q8TDS5 423 aa13.27□□□□□ -0.29
SENP6-209ENST00000485497 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
SENP6-209ENST00000485497 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
SENP6-209ENST00000485497 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
SENP6-209ENST00000485497 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
SENP6-209ENST00000485497 ZNF687Q8N1G0 1237 aa13.18□□□□□ -0.3
SENP6-209ENST00000485497 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
SENP6-209ENST00000485497 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
SENP6-209ENST00000485497 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
SENP6-209ENST00000485497 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
SENP6-209ENST00000485497 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
SENP6-209ENST00000485497 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
SENP6-209ENST00000485497 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
SENP6-209ENST00000485497 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
SENP6-209ENST00000485497 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
SENP6-209ENST00000485497 EVI5O60447 810 aa13.11□□□□□ -0.31
SENP6-209ENST00000485497 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
SENP6-209ENST00000485497 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
SENP6-209ENST00000485497 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
SENP6-209ENST00000485497 PBX2P40425 430 aa13.07□□□□□ -0.32
SENP6-209ENST00000485497 E2F4Q16254 413 aa13.06□□□□□ -0.32
SENP6-209ENST00000485497 DPYSL4O14531 572 aa13.05□□□□□ -0.32
SENP6-209ENST00000485497 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
SENP6-209ENST00000485497 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
SENP6-209ENST00000485497 FOSBP53539 338 aa13.01□□□□□ -0.33
SENP6-209ENST00000485497 SPNS2Q8IVW8 549 aa13.01□□□□□ -0.33
SENP6-209ENST00000485497 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
SENP6-209ENST00000485497 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
SENP6-209ENST00000485497 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
SENP6-209ENST00000485497 LSM11P83369 360 aaKnown RBP eCLIP12.97□□□□□ -0.33
SENP6-209ENST00000485497 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
SENP6-209ENST00000485497 PDIA6Q15084 440 aa12.96□□□□□ -0.33
SENP6-209ENST00000485497 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
SENP6-209ENST00000485497 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
SENP6-209ENST00000485497 ANKRD13DQ6ZTN6 518 aa12.94□□□□□ -0.34
SENP6-209ENST00000485497 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
SENP6-209ENST00000485497 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
SENP6-209ENST00000485497 PHF14O94880 888 aa12.92□□□□□ -0.34
SENP6-209ENST00000485497 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
SENP6-209ENST00000485497 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
SENP6-209ENST00000485497 PTGER2P43116 358 aa12.91□□□□□ -0.34
SENP6-209ENST00000485497 PSEN2P49810 448 aa12.91□□□□□ -0.34
SENP6-209ENST00000485497 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
SENP6-209ENST00000485497 KCNK17Q96T54 332 aa12.91□□□□□ -0.34
SENP6-209ENST00000485497 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
SENP6-209ENST00000485497 PTPREP23469 700 aa12.89□□□□□ -0.35
SENP6-209ENST00000485497 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
SENP6-209ENST00000485497 EPAS1Q99814 870 aa12.88□□□□□ -0.35
SENP6-209ENST00000485497 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
SENP6-209ENST00000485497 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
SENP6-209ENST00000485497 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
SENP6-209ENST00000485497 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
SENP6-209ENST00000485497 TK2O00142 265 aa12.85□□□□□ -0.35
SENP6-209ENST00000485497 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
SENP6-209ENST00000485497 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
SENP6-209ENST00000485497 DDX12PQ92771 950 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms