RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 NCOA2Q15596 1464 aa28.8■■■□□ 2.2
ERCC2-205ENST00000485403 GPATCH8Q9UKJ3 1502 aaKnown RBP28.8■■■□□ 2.2
ERCC2-205ENST00000485403 COL17A1Q9UMD9 1497 aaPredicted RBP28.79■■■□□ 2.2
ERCC2-205ENST00000485403 ARHGAP5Q13017 1502 aa28.77■■■□□ 2.2
ERCC2-205ENST00000485403 AKNAQ7Z591 1439 aa28.76■■■□□ 2.19
ERCC2-205ENST00000485403 CCNB3Q8WWL7 1395 aa28.75■■■□□ 2.19
ERCC2-205ENST00000485403 EFCAB2Q5VUJ9 269 aa28.74■■■□□ 2.19
ERCC2-205ENST00000485403 ITSN2Q9NZM3 1697 aa28.73■■■□□ 2.19
ERCC2-205ENST00000485403 ADGRL1O94910 1474 aa28.68■■■□□ 2.18
ERCC2-205ENST00000485403 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
ERCC2-205ENST00000485403 CFDP1Q9UEE9 299 aaPredicted RBP28.64■■■□□ 2.18
ERCC2-205ENST00000485403 SAMD9LQ8IVG5 1584 aa28.64■■■□□ 2.18
ERCC2-205ENST00000485403 RICTORQ6R327 1708 aa28.64■■■□□ 2.18
ERCC2-205ENST00000485403 ABCC1P33527 1531 aa28.64■■■□□ 2.18
ERCC2-205ENST00000485403 FRMPD1Q5SYB0 1578 aa28.64■■■□□ 2.17
ERCC2-205ENST00000485403 DENND4BO75064 1496 aaPredicted RBP28.63■■■□□ 2.17
ERCC2-205ENST00000485403 SCAPERQ9BY12 1400 aa28.62■■■□□ 2.17
ERCC2-205ENST00000485403 MYOM3Q5VTT5 1437 aa28.6■■■□□ 2.17
ERCC2-205ENST00000485403 RAPGEF3O95398 923 aa28.59■■■□□ 2.17
ERCC2-205ENST00000485403 POGZQ7Z3K3 1410 aa28.58■■■□□ 2.17
ERCC2-205ENST00000485403 ARHGEF12Q9NZN5 1544 aa28.58■■■□□ 2.16
ERCC2-205ENST00000485403 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
ERCC2-205ENST00000485403 KIAA1107Q9UPP5 1409 aa28.56■■■□□ 2.16
ERCC2-205ENST00000485403 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
ERCC2-205ENST00000485403 ZNF777Q9ULD5 760 aaPredicted RBP28.55■■■□□ 2.16
ERCC2-205ENST00000485403 ZMYM4Q5VZL5 1548 aa28.54■■■□□ 2.16
ERCC2-205ENST00000485403 SYCP2Q9BX26 1530 aa28.53■■■□□ 2.16
ERCC2-205ENST00000485403 ZNF518AQ6AHZ1 1483 aa28.53■■■□□ 2.16
ERCC2-205ENST00000485403 KDM5CP41229 1560 aa28.51■■■□□ 2.16
ERCC2-205ENST00000485403 ZNF644Q9H582 1327 aaPredicted RBP28.51■■■□□ 2.15
ERCC2-205ENST00000485403 CAMSAP2Q08AD1 1489 aa28.51■■■□□ 2.15
ERCC2-205ENST00000485403 TRAPPC8Q9Y2L5 1435 aa28.49■■■□□ 2.15
ERCC2-205ENST00000485403 MBD5Q9P267 1494 aa28.47■■■□□ 2.15
ERCC2-205ENST00000485403 FGD6Q6ZV73 1430 aa28.46■■■□□ 2.15
ERCC2-205ENST00000485403 MAGI2Q86UL8 1455 aa28.45■■■□□ 2.15
ERCC2-205ENST00000485403 AFAP1Q8N556 730 aa28.45■■■□□ 2.15
ERCC2-205ENST00000485403 HNRNPMP52272 730 aaKnown RBP eCLIP28.44■■■□□ 2.142e-7■■■■□ 22.9
ERCC2-205ENST00000485403 PTPN23Q9H3S7 1636 aa28.43■■■□□ 2.14
ERCC2-205ENST00000485403 TCOF1Q13428 1488 aaKnown RBP28.41■■■□□ 2.14
ERCC2-205ENST00000485403 ARHGEF40Q8TER5 1519 aa28.41■■■□□ 2.14
ERCC2-205ENST00000485403 ARHGEF5Q12774 1597 aa28.41■■■□□ 2.14
ERCC2-205ENST00000485403 HECW2Q9P2P5 1572 aa28.41■■■□□ 2.14
ERCC2-205ENST00000485403 MLH3Q9UHC1 1453 aa28.4■■■□□ 2.14
ERCC2-205ENST00000485403 ZFYVE16Q7Z3T8 1539 aa28.39■■■□□ 2.14
ERCC2-205ENST00000485403 YEATS2Q9ULM3 1422 aa28.37■■■□□ 2.13
ERCC2-205ENST00000485403 CCDC141Q6ZP82 1450 aa28.37■■■□□ 2.13
ERCC2-205ENST00000485403 KIDINS220Q9ULH0 1771 aa28.36■■■□□ 2.13
ERCC2-205ENST00000485403 RSPH4AQ5TD94 716 aa28.35■■■□□ 2.13
ERCC2-205ENST00000485403 INO80Q9ULG1 1556 aaPredicted RBP28.35■■■□□ 2.13
ERCC2-205ENST00000485403 SPAG9O60271 1321 aaKnown RBP28.3■■■□□ 2.12
ERCC2-205ENST00000485403 ATP7AQ04656 1500 aa28.3■■■□□ 2.12
ERCC2-205ENST00000485403 ABCA6Q8N139 1617 aa28.3■■■□□ 2.12
ERCC2-205ENST00000485403 DIP2CQ9Y2E4 1556 aa28.3■■■□□ 2.12
ERCC2-205ENST00000485403 DNMT1P26358 1616 aaKnown RBP28.28■■■□□ 2.12
ERCC2-205ENST00000485403 RTEL1-TNFRSF6BF6WH68 1400 aa28.28■■■□□ 2.12
ERCC2-205ENST00000485403 ATP10AO60312 1499 aa28.27■■■□□ 2.12
ERCC2-205ENST00000485403 CROCC2H7BZ55 1655 aa28.26■■■□□ 2.11
ERCC2-205ENST00000485403 MAST1Q9Y2H9 1570 aa28.26■■■□□ 2.11
ERCC2-205ENST00000485403 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
ERCC2-205ENST00000485403 ABCC5O15440 1437 aa28.24■■■□□ 2.11
ERCC2-205ENST00000485403 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
ERCC2-205ENST00000485403 C9orf84Q5VXU9 1444 aa28.23■■■□□ 2.11
ERCC2-205ENST00000485403 RRBP1Q9P2E9 1410 aaKnown RBP28.23■■■□□ 2.11
ERCC2-205ENST00000485403 SHANK2Q9UPX8 1470 aa28.23■■■□□ 2.11
ERCC2-205ENST00000485403 SIGLEC1Q9BZZ2 1709 aa28.23■■■□□ 2.11
ERCC2-205ENST00000485403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.23■■■□□ 2.11
ERCC2-205ENST00000485403 DAPK1P53355 1430 aa28.22■■■□□ 2.11
ERCC2-205ENST00000485403 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
ERCC2-205ENST00000485403 TSPY4P0CV99 314 aa28.2■■■□□ 2.1
ERCC2-205ENST00000485403 TSPY10P0CW01 314 aa28.2■■■□□ 2.1
ERCC2-205ENST00000485403 FAM50AQ14320 339 aaKnown RBP28.2■■■□□ 2.1
ERCC2-205ENST00000485403 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
ERCC2-205ENST00000485403 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
ERCC2-205ENST00000485403 AGLP35573 1532 aa28.13■■■□□ 2.09
ERCC2-205ENST00000485403 A2MP01023 1474 aa28.12■■■□□ 2.09
ERCC2-205ENST00000485403 BCORL1Q5H9F3 1711 aa28.1■■■□□ 2.09
ERCC2-205ENST00000485403 ARID4BQ4LE39 1312 aaPredicted RBP28.08■■■□□ 2.09
ERCC2-205ENST00000485403 ADGRL2O95490 1459 aa28.08■■■□□ 2.09
ERCC2-205ENST00000485403 PTPRKQ15262 1439 aa28.07■■■□□ 2.08
ERCC2-205ENST00000485403 DHX29Q7Z478 1369 aaKnown RBP28.06■■■□□ 2.08
ERCC2-205ENST00000485403 PCGF6Q9BYE7 350 aa28.05■■■□□ 2.08
ERCC2-205ENST00000485403 ADAMTSL3P82987 1691 aa28.05■■■□□ 2.08
ERCC2-205ENST00000485403 NCOA1Q15788 1441 aa28.03■■■□□ 2.08
ERCC2-205ENST00000485403 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
ERCC2-205ENST00000485403 ANKRD30AQ9BXX3 1397 aa28.02■■■□□ 2.08
ERCC2-205ENST00000485403 DUOX2Q9NRD8 1548 aa28.02■■■□□ 2.08
ERCC2-205ENST00000485403 KIF15Q9NS87 1388 aa28.01■■■□□ 2.07
ERCC2-205ENST00000485403 CHIC2Q9UKJ5 165 aa28.01■■■□□ 2.07
ERCC2-205ENST00000485403 ROCK1Q13464 1354 aa27.98■■■□□ 2.07
ERCC2-205ENST00000485403 EIF2AK4Q9P2K8 1649 aaKnown RBP27.96■■■□□ 2.07
ERCC2-205ENST00000485403 RRP7BPQ9NSQ0 103 aa27.96■■■□□ 2.07
ERCC2-205ENST00000485403 MADDQ8WXG6 1647 aa27.95■■■□□ 2.07
ERCC2-205ENST00000485403 ERBINQ96RT1 1412 aa27.94■■■□□ 2.06
ERCC2-205ENST00000485403 ITGAEP38570 1179 aa27.93■■■□□ 2.06
ERCC2-205ENST00000485403 FER1L4A9Z1Z3 1794 aa27.93■■■□□ 2.06
ERCC2-205ENST00000485403 MLECQ14165 292 aa27.92■■■□□ 2.06
ERCC2-205ENST00000485403 RNF17Q9BXT8 1623 aaKnown RBP27.9■■■□□ 2.06
ERCC2-205ENST00000485403 KIF3BO15066 747 aa27.88■■■□□ 2.05
ERCC2-205ENST00000485403 RIMS1Q86UR5 1692 aaKnown RBP27.87■■■□□ 2.05
ERCC2-205ENST00000485403 ANKRD50Q9ULJ7 1429 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms