RNA–Protein interactions for RNA: ENST00000485265.1

CTNNB1-214, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-214ENST00000485265 ST18O60284 1047 aa15.12■□□□□ 0.01
CTNNB1-214ENST00000485265 HOXB3P14651 431 aaPredicted RBP15.1■□□□□ 0.01
CTNNB1-214ENST00000485265 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
CTNNB1-214ENST00000485265 TMC2Q8TDI7 906 aa15.04■□□□□ -0
CTNNB1-214ENST00000485265 POTEMA6NI47 508 aa15.03■□□□□ -0
CTNNB1-214ENST00000485265 POTEGQ6S5H5 508 aa15.02■□□□□ -0
CTNNB1-214ENST00000485265 DOK7Q18PE1 504 aa15.01□□□□□ -0.01
CTNNB1-214ENST00000485265 ZBTB4Q9P1Z0 1013 aaPredicted RBP15□□□□□ -0.01
CTNNB1-214ENST00000485265 GPHNQ9NQX3 736 aaPredicted RBP14.98□□□□□ -0.01
CTNNB1-214ENST00000485265 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
CTNNB1-214ENST00000485265 CRISPLD2Q9H0B8 497 aa14.95□□□□□ -0.02
CTNNB1-214ENST00000485265 FOXK1P85037 733 aa14.94□□□□□ -0.02
CTNNB1-214ENST00000485265 ZNF710Q8N1W2 664 aa14.94□□□□□ -0.02
CTNNB1-214ENST00000485265 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
CTNNB1-214ENST00000485265 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
CTNNB1-214ENST00000485265 MARVELD3Q96A59 401 aa14.92□□□□□ -0.02
CTNNB1-214ENST00000485265 DSG2Q14126 1118 aa14.91□□□□□ -0.02
CTNNB1-214ENST00000485265 HOXB1P14653 301 aaPredicted RBP14.9□□□□□ -0.02
CTNNB1-214ENST00000485265 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
CTNNB1-214ENST00000485265 CADPS2Q86UW7 1296 aa14.9□□□□□ -0.02
CTNNB1-214ENST00000485265 ZSWIM6Q9HCJ5 1215 aa14.9□□□□□ -0.02
CTNNB1-214ENST00000485265 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
CTNNB1-214ENST00000485265 CFAP44Q96MT7 982 aa14.88□□□□□ -0.03
CTNNB1-214ENST00000485265 SLC34A2O95436 690 aa14.87□□□□□ -0.03
CTNNB1-214ENST00000485265 PLPP6Q8IY26 295 aa14.87□□□□□ -0.03
CTNNB1-214ENST00000485265 PDE4AP27815 886 aa14.86□□□□□ -0.03
CTNNB1-214ENST00000485265 EMP3P54852 163 aa14.85□□□□□ -0.03
CTNNB1-214ENST00000485265 ARSIQ5FYB1 569 aa14.82□□□□□ -0.04
CTNNB1-214ENST00000485265 PPP1R15BQ5SWA1 713 aa14.81□□□□□ -0.04
CTNNB1-214ENST00000485265 MFSD10Q14728 455 aa14.8□□□□□ -0.04
CTNNB1-214ENST00000485265 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
CTNNB1-214ENST00000485265 KHSRPQ92945 711 aaKnown RBP eCLIP14.79□□□□□ -0.04
CTNNB1-214ENST00000485265 PCDHGA4Q9Y5G9 962 aa14.78□□□□□ -0.04
CTNNB1-214ENST00000485265 PTCD2Q8WV60 388 aaKnown RBP14.77□□□□□ -0.05
CTNNB1-214ENST00000485265 DDX27Q96GQ7 796 aaKnown RBP14.77□□□□□ -0.05
CTNNB1-214ENST00000485265 POTEB3A0JP26 581 aa14.76□□□□□ -0.05
CTNNB1-214ENST00000485265 FAM205CA6NFA0 338 aa14.76□□□□□ -0.05
CTNNB1-214ENST00000485265 POTEBQ6S5H4 581 aa14.76□□□□□ -0.05
CTNNB1-214ENST00000485265 HS3ST6Q96QI5 342 aa14.75□□□□□ -0.05
CTNNB1-214ENST00000485265 PCDH10Q9P2E7 1040 aa14.75□□□□□ -0.05
CTNNB1-214ENST00000485265 CDAN1Q8IWY9 1227 aa14.72□□□□□ -0.05
CTNNB1-214ENST00000485265 NUDT7P0C024 238 aa14.71□□□□□ -0.05
CTNNB1-214ENST00000485265 ERBB3P21860 1342 aa14.7□□□□□ -0.06
CTNNB1-214ENST00000485265 OXER1Q8TDS5 423 aa14.69□□□□□ -0.06
CTNNB1-214ENST00000485265 KDM4FA0A1W2PPD8 638 aa14.68□□□□□ -0.06
CTNNB1-214ENST00000485265 VARS2Q5ST30 1063 aaKnown RBP14.66□□□□□ -0.06
CTNNB1-214ENST00000485265 UPF1Q92900 1129 aaKnown RBP eCLIP14.66□□□□□ -0.06
CTNNB1-214ENST00000485265 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
CTNNB1-214ENST00000485265 TBC1D12O60347 775 aa14.63□□□□□ -0.07
CTNNB1-214ENST00000485265 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
CTNNB1-214ENST00000485265 LHX6Q9UPM6 363 aa14.62□□□□□ -0.07
CTNNB1-214ENST00000485265 CAMK2BQ13554 666 aa14.61□□□□□ -0.07
CTNNB1-214ENST00000485265 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
CTNNB1-214ENST00000485265 PLCB2Q00722 1185 aa14.6□□□□□ -0.07
CTNNB1-214ENST00000485265 ZNF687Q8N1G0 1237 aa14.56□□□□□ -0.08
CTNNB1-214ENST00000485265 KRTAP3-3Q9BYR6 98 aa14.56□□□□□ -0.08
CTNNB1-214ENST00000485265 KRTAP3-2Q9BYR7 98 aa14.56□□□□□ -0.08
CTNNB1-214ENST00000485265 MAP3K9P80192 1104 aa14.51□□□□□ -0.09
CTNNB1-214ENST00000485265 PSDA5PKW4 1024 aaPredicted RBP14.49□□□□□ -0.09
CTNNB1-214ENST00000485265 EVI5O60447 810 aa14.49□□□□□ -0.09
CTNNB1-214ENST00000485265 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
CTNNB1-214ENST00000485265 WDR70Q9NW82 654 aa14.49□□□□□ -0.09
CTNNB1-214ENST00000485265 E2F4Q16254 413 aa14.47□□□□□ -0.09
CTNNB1-214ENST00000485265 DPYSL4O14531 572 aa14.45□□□□□ -0.1
CTNNB1-214ENST00000485265 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
CTNNB1-214ENST00000485265 PPP4R3BQ5MIZ7 849 aa14.41□□□□□ -0.1
CTNNB1-214ENST00000485265 PBX2P40425 430 aa14.39□□□□□ -0.11
CTNNB1-214ENST00000485265 FOSBP53539 338 aa14.39□□□□□ -0.11
CTNNB1-214ENST00000485265 ARIH1Q9Y4X5 557 aaPredicted RBP14.39□□□□□ -0.11
CTNNB1-214ENST00000485265 ZNF454Q8N9F8 522 aa14.38□□□□□ -0.11
CTNNB1-214ENST00000485265 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
CTNNB1-214ENST00000485265 SPNS2Q8IVW8 549 aa14.37□□□□□ -0.11
CTNNB1-214ENST00000485265 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
CTNNB1-214ENST00000485265 PDIA6Q15084 440 aa14.35□□□□□ -0.11
CTNNB1-214ENST00000485265 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
CTNNB1-214ENST00000485265 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
CTNNB1-214ENST00000485265 LSM11P83369 360 aaKnown RBP eCLIP14.33□□□□□ -0.12
CTNNB1-214ENST00000485265 PCDHGA10Q9Y5H3 936 aa14.31□□□□□ -0.12
CTNNB1-214ENST00000485265 SPDYE16A6NNV3 312 aaPredicted RBP14.3□□□□□ -0.12
CTNNB1-214ENST00000485265 PTGER2P43116 358 aa14.3□□□□□ -0.12
CTNNB1-214ENST00000485265 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
CTNNB1-214ENST00000485265 PSEN2P49810 448 aa14.29□□□□□ -0.12
CTNNB1-214ENST00000485265 KCNV2Q8TDN2 545 aa14.29□□□□□ -0.12
CTNNB1-214ENST00000485265 ZDHHC16Q969W1 377 aa14.29□□□□□ -0.12
CTNNB1-214ENST00000485265 PHF14O94880 888 aa14.28□□□□□ -0.12
CTNNB1-214ENST00000485265 ADAM33Q9BZ11 813 aa14.28□□□□□ -0.12
CTNNB1-214ENST00000485265 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.13
CTNNB1-214ENST00000485265 MMRN1Q13201 1228 aa14.26□□□□□ -0.13
CTNNB1-214ENST00000485265 DMRTA1Q5VZB9 504 aa14.26□□□□□ -0.13
CTNNB1-214ENST00000485265 KCNK17Q96T54 332 aa14.26□□□□□ -0.13
CTNNB1-214ENST00000485265 DDX12PQ92771 950 aa14.25□□□□□ -0.13
CTNNB1-214ENST00000485265 TYW1BQ6NUM6 668 aa14.24□□□□□ -0.13
CTNNB1-214ENST00000485265 ARHGEF1Q92888 912 aaKnown RBP14.23□□□□□ -0.13
CTNNB1-214ENST00000485265 PTPREP23469 700 aa14.21□□□□□ -0.13
CTNNB1-214ENST00000485265 FBXW7Q969H0 707 aa14.21□□□□□ -0.13
CTNNB1-214ENST00000485265 EPAS1Q99814 870 aa14.21□□□□□ -0.13
CTNNB1-214ENST00000485265 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
CTNNB1-214ENST00000485265 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
CTNNB1-214ENST00000485265 ADGRD1Q6QNK2 874 aa14.19□□□□□ -0.14
CTNNB1-214ENST00000485265 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms