RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
TMEM40-208ENST00000485124 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
TMEM40-208ENST00000485124 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
TMEM40-208ENST00000485124 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
TMEM40-208ENST00000485124 PCF11O94913 1555 aaKnown RBP16.21■□□□□ 0.19
TMEM40-208ENST00000485124 CCDC18Q5T9S5 1454 aa16.21■□□□□ 0.19
TMEM40-208ENST00000485124 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
TMEM40-208ENST00000485124 SIGLEC1Q9BZZ2 1709 aa16.2■□□□□ 0.18
TMEM40-208ENST00000485124 ZNF518AQ6AHZ1 1483 aa16.2■□□□□ 0.18
TMEM40-208ENST00000485124 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
TMEM40-208ENST00000485124 KDM5CP41229 1560 aa16.18■□□□□ 0.18
TMEM40-208ENST00000485124 ATP10AO60312 1499 aa16.18■□□□□ 0.18
TMEM40-208ENST00000485124 LMTK3Q96Q04 1460 aa16.18■□□□□ 0.18
TMEM40-208ENST00000485124 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
TMEM40-208ENST00000485124 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
TMEM40-208ENST00000485124 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
TMEM40-208ENST00000485124 C9orf84Q5VXU9 1444 aa16.17■□□□□ 0.18
TMEM40-208ENST00000485124 CDC42BPBQ9Y5S2 1711 aa16.16■□□□□ 0.18
TMEM40-208ENST00000485124 PREX2Q70Z35 1606 aa16.16■□□□□ 0.18
TMEM40-208ENST00000485124 ARHGEF12Q9NZN5 1544 aa16.15■□□□□ 0.18
TMEM40-208ENST00000485124 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
TMEM40-208ENST00000485124 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
TMEM40-208ENST00000485124 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
TMEM40-208ENST00000485124 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
TMEM40-208ENST00000485124 ABCC1P33527 1531 aa16.11■□□□□ 0.17
TMEM40-208ENST00000485124 CDC42BPAQ5VT25 1732 aa16.1■□□□□ 0.17
TMEM40-208ENST00000485124 DIP2CQ9Y2E4 1556 aa16.09■□□□□ 0.17
TMEM40-208ENST00000485124 ITSN2Q9NZM3 1697 aa16.09■□□□□ 0.17
TMEM40-208ENST00000485124 AGLP35573 1532 aa16.07■□□□□ 0.16
TMEM40-208ENST00000485124 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
TMEM40-208ENST00000485124 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
TMEM40-208ENST00000485124 ABCA6Q8N139 1617 aa16.06■□□□□ 0.16
TMEM40-208ENST00000485124 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
TMEM40-208ENST00000485124 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
TMEM40-208ENST00000485124 MLECQ14165 292 aa16.04■□□□□ 0.16
TMEM40-208ENST00000485124 KIDINS220Q9ULH0 1771 aa16.03■□□□□ 0.16
TMEM40-208ENST00000485124 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.16
TMEM40-208ENST00000485124 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
TMEM40-208ENST00000485124 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
TMEM40-208ENST00000485124 PLEKHH2Q8IVE3 1493 aa15.99■□□□□ 0.15
TMEM40-208ENST00000485124 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
TMEM40-208ENST00000485124 C3P01024 1663 aa15.98■□□□□ 0.15
TMEM40-208ENST00000485124 CNTLNQ9NXG0 1405 aa15.97■□□□□ 0.15
TMEM40-208ENST00000485124 HSPA2P54652 639 aa15.97■□□□□ 0.15
TMEM40-208ENST00000485124 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
TMEM40-208ENST00000485124 SYCP2Q9BX26 1530 aa15.96■□□□□ 0.15
TMEM40-208ENST00000485124 MROH2AA6NES4 1674 aa15.95■□□□□ 0.14
TMEM40-208ENST00000485124 UHRF1BP1Q6BDS2 1440 aa15.95■□□□□ 0.14
TMEM40-208ENST00000485124 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
TMEM40-208ENST00000485124 INO80Q9ULG1 1556 aaPredicted RBP15.94■□□□□ 0.14
TMEM40-208ENST00000485124 MTUS2Q5JR59 1369 aa15.93■□□□□ 0.14
TMEM40-208ENST00000485124 ATP7AQ04656 1500 aa15.93■□□□□ 0.14
TMEM40-208ENST00000485124 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
TMEM40-208ENST00000485124 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
TMEM40-208ENST00000485124 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
TMEM40-208ENST00000485124 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
TMEM40-208ENST00000485124 CEBPAP49715 358 aaPredicted RBP15.92■□□□□ 0.14
TMEM40-208ENST00000485124 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
TMEM40-208ENST00000485124 SPAG9O60271 1321 aaKnown RBP15.92■□□□□ 0.14
TMEM40-208ENST00000485124 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
TMEM40-208ENST00000485124 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
TMEM40-208ENST00000485124 NPATQ14207 1427 aa15.9■□□□□ 0.14
TMEM40-208ENST00000485124 ADGBQ8N7X0 1667 aa15.89■□□□□ 0.13
TMEM40-208ENST00000485124 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
TMEM40-208ENST00000485124 CEP162Q5TB80 1403 aa15.89■□□□□ 0.13
TMEM40-208ENST00000485124 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
TMEM40-208ENST00000485124 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
TMEM40-208ENST00000485124 A2MP01023 1474 aa15.87■□□□□ 0.13
TMEM40-208ENST00000485124 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
TMEM40-208ENST00000485124 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
TMEM40-208ENST00000485124 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
TMEM40-208ENST00000485124 PTPRTO14522 1441 aa15.85■□□□□ 0.13
TMEM40-208ENST00000485124 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
TMEM40-208ENST00000485124 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
TMEM40-208ENST00000485124 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
TMEM40-208ENST00000485124 ZNF142P52746 1687 aaPredicted RBP15.82■□□□□ 0.12
TMEM40-208ENST00000485124 CLTCQ00610 1675 aaKnown RBP15.82■□□□□ 0.12
TMEM40-208ENST00000485124 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
TMEM40-208ENST00000485124 FAM135AQ9P2D6 1515 aa15.81■□□□□ 0.12
TMEM40-208ENST00000485124 RSPH4AQ5TD94 716 aa15.8■□□□□ 0.12
TMEM40-208ENST00000485124 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
TMEM40-208ENST00000485124 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
TMEM40-208ENST00000485124 MYO3AQ8NEV4 1616 aa15.78■□□□□ 0.12
TMEM40-208ENST00000485124 PLA2R1Q13018 1463 aa15.77■□□□□ 0.11
TMEM40-208ENST00000485124 IQSEC2Q5JU85 1478 aa15.77■□□□□ 0.11
TMEM40-208ENST00000485124 PTPRKQ15262 1439 aa15.77■□□□□ 0.11
TMEM40-208ENST00000485124 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
TMEM40-208ENST00000485124 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
TMEM40-208ENST00000485124 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
TMEM40-208ENST00000485124 ARHGEF5Q12774 1597 aa15.76■□□□□ 0.11
TMEM40-208ENST00000485124 CAMSAP2Q08AD1 1489 aa15.76■□□□□ 0.11
TMEM40-208ENST00000485124 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
TMEM40-208ENST00000485124 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
TMEM40-208ENST00000485124 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
TMEM40-208ENST00000485124 LTBP4Q8N2S1 1624 aa15.74■□□□□ 0.11
TMEM40-208ENST00000485124 GGT6Q6P531 493 aa15.73■□□□□ 0.11
TMEM40-208ENST00000485124 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
TMEM40-208ENST00000485124 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.11
TMEM40-208ENST00000485124 KDM5DQ9BY66 1539 aa15.71■□□□□ 0.11
TMEM40-208ENST00000485124 PKD2Q13563 968 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms