RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 OCEL1Q9H607 264 aa9.55□□□□□ -0.88
TM9SF3-205ENST00000485093 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
TM9SF3-205ENST00000485093 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
TM9SF3-205ENST00000485093 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
TM9SF3-205ENST00000485093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.88
TM9SF3-205ENST00000485093 DPY19L2Q6NUT2 758 aa9.52□□□□□ -0.89
TM9SF3-205ENST00000485093 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
TM9SF3-205ENST00000485093 SNPHO15079 494 aa9.49□□□□□ -0.89
TM9SF3-205ENST00000485093 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
TM9SF3-205ENST00000485093 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
TM9SF3-205ENST00000485093 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
TM9SF3-205ENST00000485093 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
TM9SF3-205ENST00000485093 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
TM9SF3-205ENST00000485093 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
TM9SF3-205ENST00000485093 PLCG2P16885 1265 aa9.41□□□□□ -0.9
TM9SF3-205ENST00000485093 EMP3P54852 163 aa9.41□□□□□ -0.9
TM9SF3-205ENST00000485093 MICALL2Q8IY33 904 aa9.41□□□□□ -0.9
TM9SF3-205ENST00000485093 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
TM9SF3-205ENST00000485093 NCKAP5LQ9HCH0 1330 aa9.4□□□□□ -0.9
TM9SF3-205ENST00000485093 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
TM9SF3-205ENST00000485093 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
TM9SF3-205ENST00000485093 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
TM9SF3-205ENST00000485093 KIF3CO14782 793 aa9.38□□□□□ -0.91
TM9SF3-205ENST00000485093 MFSD10Q14728 455 aa9.36□□□□□ -0.91
TM9SF3-205ENST00000485093 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
TM9SF3-205ENST00000485093 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
TM9SF3-205ENST00000485093 GPHNQ9NQX3 736 aaPredicted RBP9.33□□□□□ -0.92
TM9SF3-205ENST00000485093 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
TM9SF3-205ENST00000485093 PDE4AP27815 886 aa9.3□□□□□ -0.92
TM9SF3-205ENST00000485093 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
TM9SF3-205ENST00000485093 FOXK1P85037 733 aa9.28□□□□□ -0.92
TM9SF3-205ENST00000485093 CAMK2BQ13554 666 aa9.28□□□□□ -0.92
TM9SF3-205ENST00000485093 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
TM9SF3-205ENST00000485093 C2orf72A6NCS6 295 aa9.25□□□□□ -0.93
TM9SF3-205ENST00000485093 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
TM9SF3-205ENST00000485093 DSG2Q14126 1118 aa9.24□□□□□ -0.93
TM9SF3-205ENST00000485093 DDX27Q96GQ7 796 aaKnown RBP9.21□□□□□ -0.94
TM9SF3-205ENST00000485093 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
TM9SF3-205ENST00000485093 G3V3G9 751 aa9.18□□□□□ -0.94
TM9SF3-205ENST00000485093 SLC34A2O95436 690 aa9.18□□□□□ -0.94
TM9SF3-205ENST00000485093 E2F4Q16254 413 aa9.18□□□□□ -0.94
TM9SF3-205ENST00000485093 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
TM9SF3-205ENST00000485093 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
TM9SF3-205ENST00000485093 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
TM9SF3-205ENST00000485093 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
TM9SF3-205ENST00000485093 EMILIN3Q9NT22 766 aa9.16□□□□□ -0.94
TM9SF3-205ENST00000485093 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
TM9SF3-205ENST00000485093 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
TM9SF3-205ENST00000485093 WDR70Q9NW82 654 aa9.15□□□□□ -0.94
TM9SF3-205ENST00000485093 KDM4FA0A1W2PPD8 638 aa9.13□□□□□ -0.95
TM9SF3-205ENST00000485093 HOXB3P14651 431 aaPredicted RBP9.13□□□□□ -0.95
TM9SF3-205ENST00000485093 PTCD2Q8WV60 388 aaKnown RBP9.13□□□□□ -0.95
TM9SF3-205ENST00000485093 OXER1Q8TDS5 423 aa9.12□□□□□ -0.95
TM9SF3-205ENST00000485093 P3H3Q8IVL6 736 aa9.11□□□□□ -0.95
TM9SF3-205ENST00000485093 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
TM9SF3-205ENST00000485093 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
TM9SF3-205ENST00000485093 GPR153Q6NV75 609 aa9.04□□□□□ -0.96
TM9SF3-205ENST00000485093 PTGER2P43116 358 aa9.03□□□□□ -0.96
TM9SF3-205ENST00000485093 PDIA6Q15084 440 aa9.03□□□□□ -0.96
TM9SF3-205ENST00000485093 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
TM9SF3-205ENST00000485093 ERBB3P21860 1342 aa9.02□□□□□ -0.97
TM9SF3-205ENST00000485093 DPYSL4O14531 572 aa9.01□□□□□ -0.97
TM9SF3-205ENST00000485093 BCANQ96GW7 911 aa9.01□□□□□ -0.97
TM9SF3-205ENST00000485093 TESPA1A2RU30 521 aaPredicted RBP9□□□□□ -0.97
TM9SF3-205ENST00000485093 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
TM9SF3-205ENST00000485093 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
TM9SF3-205ENST00000485093 DOK7Q18PE1 504 aa8.98□□□□□ -0.97
TM9SF3-205ENST00000485093 NISCHQ9Y2I1 1504 aa8.97□□□□□ -0.97
TM9SF3-205ENST00000485093 SEMA3EO15041 775 aa8.97□□□□□ -0.97
TM9SF3-205ENST00000485093 MAP3K9P80192 1104 aa8.96□□□□□ -0.98
TM9SF3-205ENST00000485093 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
TM9SF3-205ENST00000485093 TBC1D12O60347 775 aa8.94□□□□□ -0.98
TM9SF3-205ENST00000485093 EVI5O60447 810 aa8.94□□□□□ -0.98
TM9SF3-205ENST00000485093 ZNF687Q8N1G0 1237 aa8.94□□□□□ -0.98
TM9SF3-205ENST00000485093 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
TM9SF3-205ENST00000485093 ARSIQ5FYB1 569 aa8.93□□□□□ -0.98
TM9SF3-205ENST00000485093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
TM9SF3-205ENST00000485093 ZNF710Q8N1W2 664 aa8.93□□□□□ -0.98
TM9SF3-205ENST00000485093 MLLT3P42568 568 aaPredicted RBP8.92□□□□□ -0.98
TM9SF3-205ENST00000485093 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■□□□ 11.5
TM9SF3-205ENST00000485093 PLA2G2EQ9NZK7 142 aa8.92□□□□□ -0.98
TM9SF3-205ENST00000485093 OSBPP22059 807 aa8.89□□□□□ -0.99
TM9SF3-205ENST00000485093 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
TM9SF3-205ENST00000485093 NBR1Q14596 966 aa8.88□□□□□ -0.99
TM9SF3-205ENST00000485093 RIMBP2O15034 1052 aa8.87□□□□□ -0.99
TM9SF3-205ENST00000485093 NUDT7P0C024 238 aa8.87□□□□□ -0.99
TM9SF3-205ENST00000485093 FOSBP53539 338 aa8.87□□□□□ -0.99
TM9SF3-205ENST00000485093 PHF14O94880 888 aa8.86□□□□□ -0.99
TM9SF3-205ENST00000485093 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
TM9SF3-205ENST00000485093 JPH4Q96JJ6 628 aa8.84□□□□□ -0.99
TM9SF3-205ENST00000485093 LHX6Q9UPM6 363 aa8.84□□□□□ -0.99
TM9SF3-205ENST00000485093 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
TM9SF3-205ENST00000485093 EPAS1Q99814 870 aa8.82□□□□□ -1
TM9SF3-205ENST00000485093 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
TM9SF3-205ENST00000485093 DDX12PQ92771 950 aa8.81□□□□□ -1
TM9SF3-205ENST00000485093 GPR37O15354 613 aa8.8□□□□□ -1
TM9SF3-205ENST00000485093 RBM26Q5T8P6 1007 aaKnown RBP8.79□□□□□ -1
TM9SF3-205ENST00000485093 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
TM9SF3-205ENST00000485093 NPDC1Q9NQX5 325 aaPredicted RBP8.79□□□□□ -1
TM9SF3-205ENST00000485093 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms