RNA–Protein interactions for RNA: ENST00000484908.1

ATP6AP1-208, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 2

Gene ATP6AP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-208ENST00000484908 ZFYVE16Q7Z3T8 1539 aa29.3■■■□□ 2.28
ATP6AP1-208ENST00000484908 EFCAB2Q5VUJ9 269 aa29.29■■■□□ 2.28
ATP6AP1-208ENST00000484908 MADDQ8WXG6 1647 aa29.28■■■□□ 2.28
ATP6AP1-208ENST00000484908 POGZQ7Z3K3 1410 aa29.28■■■□□ 2.28
ATP6AP1-208ENST00000484908 CASKIN1Q8WXD9 1431 aa29.28■■■□□ 2.28
ATP6AP1-208ENST00000484908 PCF11O94913 1555 aaKnown RBP29.26■■■□□ 2.27
ATP6AP1-208ENST00000484908 YEATS2Q9ULM3 1422 aa29.25■■■□□ 2.27
ATP6AP1-208ENST00000484908 CCDC18Q5T9S5 1454 aa29.24■■■□□ 2.27
ATP6AP1-208ENST00000484908 ARHGAP5Q13017 1502 aa29.2■■■□□ 2.27
ATP6AP1-208ENST00000484908 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
ATP6AP1-208ENST00000484908 SIGLEC1Q9BZZ2 1709 aa29.18■■■□□ 2.26
ATP6AP1-208ENST00000484908 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
ATP6AP1-208ENST00000484908 CDC42BPBQ9Y5S2 1711 aa29.16■■■□□ 2.26
ATP6AP1-208ENST00000484908 ZNF518AQ6AHZ1 1483 aa29.15■■■□□ 2.26
ATP6AP1-208ENST00000484908 ATP10AO60312 1499 aa29.13■■■□□ 2.25
ATP6AP1-208ENST00000484908 PREX2Q70Z35 1606 aa29.12■■■□□ 2.25
ATP6AP1-208ENST00000484908 KDM5CP41229 1560 aa29.1■■■□□ 2.25
ATP6AP1-208ENST00000484908 C9orf84Q5VXU9 1444 aa29.1■■■□□ 2.25
ATP6AP1-208ENST00000484908 FER1L4A9Z1Z3 1794 aa29.06■■■□□ 2.24
ATP6AP1-208ENST00000484908 AFAP1Q8N556 730 aa29.06■■■□□ 2.24
ATP6AP1-208ENST00000484908 MLECQ14165 292 aa29.05■■■□□ 2.24
ATP6AP1-208ENST00000484908 CDC42BPAQ5VT25 1732 aa29.05■■■□□ 2.24
ATP6AP1-208ENST00000484908 ILDR1Q86SU0 546 aaPredicted RBP29.04■■■□□ 2.24
ATP6AP1-208ENST00000484908 ABCC1P33527 1531 aa29.03■■■□□ 2.24
ATP6AP1-208ENST00000484908 LMTK3Q96Q04 1460 aa29.02■■■□□ 2.24
ATP6AP1-208ENST00000484908 ARHGEF12Q9NZN5 1544 aa29.01■■■□□ 2.23
ATP6AP1-208ENST00000484908 ITSN2Q9NZM3 1697 aa29.01■■■□□ 2.23
ATP6AP1-208ENST00000484908 MLH3Q9UHC1 1453 aa28.99■■■□□ 2.23
ATP6AP1-208ENST00000484908 MYT1LQ9UL68 1186 aa28.99■■■□□ 2.23
ATP6AP1-208ENST00000484908 DIP2CQ9Y2E4 1556 aa28.99■■■□□ 2.23
ATP6AP1-208ENST00000484908 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
ATP6AP1-208ENST00000484908 TRAPPC8Q9Y2L5 1435 aa28.96■■■□□ 2.23
ATP6AP1-208ENST00000484908 PLPPR3Q6T4P5 718 aa28.96■■■□□ 2.23
ATP6AP1-208ENST00000484908 ABCA6Q8N139 1617 aa28.94■■■□□ 2.22
ATP6AP1-208ENST00000484908 GPATCH8Q9UKJ3 1502 aaKnown RBP28.92■■■□□ 2.22
ATP6AP1-208ENST00000484908 SAMD9LQ8IVG5 1584 aa28.89■■■□□ 2.22
ATP6AP1-208ENST00000484908 KIDINS220Q9ULH0 1771 aa28.88■■■□□ 2.21
ATP6AP1-208ENST00000484908 ZNF777Q9ULD5 760 aaPredicted RBP28.87■■■□□ 2.21
ATP6AP1-208ENST00000484908 MTUS2Q5JR59 1369 aa28.87■■■□□ 2.21
ATP6AP1-208ENST00000484908 AGLP35573 1532 aa28.86■■■□□ 2.21
ATP6AP1-208ENST00000484908 CEP162Q5TB80 1403 aa28.85■■■□□ 2.21
ATP6AP1-208ENST00000484908 SYCP2Q9BX26 1530 aa28.84■■■□□ 2.21
ATP6AP1-208ENST00000484908 HSPA2P54652 639 aa28.83■■■□□ 2.21
ATP6AP1-208ENST00000484908 CCNB3Q8WWL7 1395 aa28.83■■■□□ 2.21
ATP6AP1-208ENST00000484908 PREX1Q8TCU6 1659 aa28.81■■■□□ 2.2
ATP6AP1-208ENST00000484908 PLEKHH2Q8IVE3 1493 aa28.81■■■□□ 2.2
ATP6AP1-208ENST00000484908 CFDP1Q9UEE9 299 aaPredicted RBP28.81■■■□□ 2.2
ATP6AP1-208ENST00000484908 KIAA1107Q9UPP5 1409 aa28.8■■■□□ 2.2
ATP6AP1-208ENST00000484908 CEBPAP49715 358 aaPredicted RBP28.79■■■□□ 2.2
ATP6AP1-208ENST00000484908 SETD1BQ9UPS6 1966 aaKnown RBP28.79■■■□□ 2.2
ATP6AP1-208ENST00000484908 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
ATP6AP1-208ENST00000484908 HNRNPMP52272 730 aaKnown RBP eCLIP28.78■■■□□ 2.2
ATP6AP1-208ENST00000484908 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
ATP6AP1-208ENST00000484908 TIAM1Q13009 1591 aa28.73■■■□□ 2.19
ATP6AP1-208ENST00000484908 ESF1Q9H501 851 aaKnown RBP28.73■■■□□ 2.19
ATP6AP1-208ENST00000484908 C3P01024 1663 aa28.73■■■□□ 2.19
ATP6AP1-208ENST00000484908 ATP7AQ04656 1500 aa28.72■■■□□ 2.19
ATP6AP1-208ENST00000484908 INO80Q9ULG1 1556 aaPredicted RBP28.71■■■□□ 2.19
ATP6AP1-208ENST00000484908 FBXO41Q8TF61 875 aa28.7■■■□□ 2.18
ATP6AP1-208ENST00000484908 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
ATP6AP1-208ENST00000484908 UHRF1BP1Q6BDS2 1440 aa28.68■■■□□ 2.18
ATP6AP1-208ENST00000484908 SUPT6HQ7KZ85 1726 aaKnown RBP28.66■■■□□ 2.18
ATP6AP1-208ENST00000484908 PLXNC1O60486 1568 aa28.63■■■□□ 2.17
ATP6AP1-208ENST00000484908 A2MP01023 1474 aa28.63■■■□□ 2.17
ATP6AP1-208ENST00000484908 MROH2AA6NES4 1674 aa28.62■■■□□ 2.17
ATP6AP1-208ENST00000484908 ZNF644Q9H582 1327 aaPredicted RBP28.62■■■□□ 2.17
ATP6AP1-208ENST00000484908 MBD5Q9P267 1494 aa28.61■■■□□ 2.17
ATP6AP1-208ENST00000484908 ADGBQ8N7X0 1667 aa28.6■■■□□ 2.17
ATP6AP1-208ENST00000484908 NCOA2Q15596 1464 aa28.59■■■□□ 2.17
ATP6AP1-208ENST00000484908 LOC105371045A0A1W2PR82 267 aa28.58■■■□□ 2.17
ATP6AP1-208ENST00000484908 STRCQ7RTU9 1775 aa28.57■■■□□ 2.16
ATP6AP1-208ENST00000484908 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
ATP6AP1-208ENST00000484908 RTEL1-TNFRSF6BF6WH68 1400 aa28.55■■■□□ 2.16
ATP6AP1-208ENST00000484908 DMRT2Q9Y5R5 561 aa28.54■■■□□ 2.16
ATP6AP1-208ENST00000484908 NPATQ14207 1427 aa28.52■■■□□ 2.16
ATP6AP1-208ENST00000484908 ZMYM3Q14202 1370 aa28.52■■■□□ 2.16
ATP6AP1-208ENST00000484908 CLTCQ00610 1675 aaKnown RBP28.52■■■□□ 2.16
ATP6AP1-208ENST00000484908 CAMSAP2Q08AD1 1489 aa28.51■■■□□ 2.15
ATP6AP1-208ENST00000484908 CCDC141Q6ZP82 1450 aa28.5■■■□□ 2.15
ATP6AP1-208ENST00000484908 RSPH4AQ5TD94 716 aa28.49■■■□□ 2.15
ATP6AP1-208ENST00000484908 GGT6Q6P531 493 aa28.49■■■□□ 2.15
ATP6AP1-208ENST00000484908 LRRC9Q6ZRR7 1453 aa28.48■■■□□ 2.15
ATP6AP1-208ENST00000484908 PPP6R1Q9UPN7 881 aa28.48■■■□□ 2.15
ATP6AP1-208ENST00000484908 CERKQ8TCT0 537 aa28.47■■■□□ 2.15
ATP6AP1-208ENST00000484908 DHX29Q7Z478 1369 aaKnown RBP28.46■■■□□ 2.15
ATP6AP1-208ENST00000484908 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
ATP6AP1-208ENST00000484908 PTPRTO14522 1441 aa28.43■■■□□ 2.14
ATP6AP1-208ENST00000484908 ARHGEF5Q12774 1597 aa28.42■■■□□ 2.14
ATP6AP1-208ENST00000484908 NCOA1Q15788 1441 aa28.4■■■□□ 2.14
ATP6AP1-208ENST00000484908 PTPRKQ15262 1439 aa28.39■■■□□ 2.14
ATP6AP1-208ENST00000484908 CAMSAP1Q5T5Y3 1602 aa28.36■■■□□ 2.13
ATP6AP1-208ENST00000484908 MYO3AQ8NEV4 1616 aa28.36■■■□□ 2.13
ATP6AP1-208ENST00000484908 ZNF142P52746 1687 aaPredicted RBP28.36■■■□□ 2.13
ATP6AP1-208ENST00000484908 TSPY4P0CV99 314 aa28.36■■■□□ 2.13
ATP6AP1-208ENST00000484908 TSPY10P0CW01 314 aa28.36■■■□□ 2.13
ATP6AP1-208ENST00000484908 KANK4Q5T7N3 995 aaPredicted RBP28.35■■■□□ 2.13
ATP6AP1-208ENST00000484908 KIF3BO15066 747 aa28.34■■■□□ 2.13
ATP6AP1-208ENST00000484908 FAM135AQ9P2D6 1515 aa28.33■■■□□ 2.13
ATP6AP1-208ENST00000484908 CEP170BQ9Y4F5 1589 aaPredicted RBP28.32■■■□□ 2.12
ATP6AP1-208ENST00000484908 MIA2Q96PC5 1412 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms