RNA–Protein interactions for RNA: ENST00000484879.1

RB1-204, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-204ENST00000484879 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
RB1-204ENST00000484879 PTGER2P43116 358 aa13.91□□□□□ -0.18
RB1-204ENST00000484879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
RB1-204ENST00000484879 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
RB1-204ENST00000484879 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
RB1-204ENST00000484879 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
RB1-204ENST00000484879 ARSIQ5FYB1 569 aa13.83□□□□□ -0.2
RB1-204ENST00000484879 NLRP6P59044 892 aa13.82□□□□□ -0.2
RB1-204ENST00000484879 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
RB1-204ENST00000484879 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
RB1-204ENST00000484879 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
RB1-204ENST00000484879 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
RB1-204ENST00000484879 LSM11P83369 360 aaKnown RBP eCLIP13.72□□□□□ -0.21
RB1-204ENST00000484879 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.21
RB1-204ENST00000484879 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
RB1-204ENST00000484879 PBX2P40425 430 aa13.69□□□□□ -0.22
RB1-204ENST00000484879 KIF3CO14782 793 aa13.68□□□□□ -0.22
RB1-204ENST00000484879 STK24Q9Y6E0 443 aa13.66□□□□□ -0.22
RB1-204ENST00000484879 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
RB1-204ENST00000484879 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
RB1-204ENST00000484879 SLC34A2O95436 690 aa13.63□□□□□ -0.23
RB1-204ENST00000484879 NUDT7P0C024 238 aa13.61□□□□□ -0.23
RB1-204ENST00000484879 STK25O00506 426 aa13.58□□□□□ -0.24
RB1-204ENST00000484879 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
RB1-204ENST00000484879 PCDHGA4Q9Y5G9 962 aa13.58□□□□□ -0.24
RB1-204ENST00000484879 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
RB1-204ENST00000484879 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
RB1-204ENST00000484879 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
RB1-204ENST00000484879 HCSTQ9UBK5 93 aa13.52□□□□□ -0.25
RB1-204ENST00000484879 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
RB1-204ENST00000484879 ARHGAP33O14559 1287 aa13.48□□□□□ -0.25
RB1-204ENST00000484879 PLA2G2EQ9NZK7 142 aa13.48□□□□□ -0.25
RB1-204ENST00000484879 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
RB1-204ENST00000484879 ADGRD1Q6QNK2 874 aa13.46□□□□□ -0.25
RB1-204ENST00000484879 TK2O00142 265 aa13.42□□□□□ -0.26
RB1-204ENST00000484879 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
RB1-204ENST00000484879 PTCD2Q8WV60 388 aaKnown RBP13.4□□□□□ -0.26
RB1-204ENST00000484879 HRO43593 1189 aa13.35□□□□□ -0.27
RB1-204ENST00000484879 PPP1R37O75864 691 aa13.35□□□□□ -0.27
RB1-204ENST00000484879 RGL2O15211 777 aa13.34□□□□□ -0.27
RB1-204ENST00000484879 FOXK1P85037 733 aa13.32□□□□□ -0.28
RB1-204ENST00000484879 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
RB1-204ENST00000484879 PKD2Q13563 968 aa13.31□□□□□ -0.28
RB1-204ENST00000484879 TBC1D12O60347 775 aa13.3□□□□□ -0.28
RB1-204ENST00000484879 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
RB1-204ENST00000484879 PSEN2P49810 448 aa13.29□□□□□ -0.28
RB1-204ENST00000484879 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
RB1-204ENST00000484879 GPHNQ9NQX3 736 aaPredicted RBP13.28□□□□□ -0.28
RB1-204ENST00000484879 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
RB1-204ENST00000484879 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
RB1-204ENST00000484879 KCTD12Q96CX2 325 aaKnown RBP13.24□□□□□ -0.29
RB1-204ENST00000484879 DSG2Q14126 1118 aa13.2□□□□□ -0.3
RB1-204ENST00000484879 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
RB1-204ENST00000484879 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
RB1-204ENST00000484879 SLC4A5Q9BY07 1137 aa13.15□□□□□ -0.3
RB1-204ENST00000484879 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
RB1-204ENST00000484879 RGS20O76081 388 aa13.13□□□□□ -0.31
RB1-204ENST00000484879 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
RB1-204ENST00000484879 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
RB1-204ENST00000484879 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
RB1-204ENST00000484879 PTPN5P54829 565 aa13.08□□□□□ -0.32
RB1-204ENST00000484879 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
RB1-204ENST00000484879 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
RB1-204ENST00000484879 RYDENQ9NUL5 291 aaKnown RBP13.04□□□□□ -0.32
RB1-204ENST00000484879 PTPREP23469 700 aa13.03□□□□□ -0.32
RB1-204ENST00000484879 THSD4Q6ZMP0 1018 aa13.03□□□□□ -0.32
RB1-204ENST00000484879 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
RB1-204ENST00000484879 FOSBP53539 338 aa13.02□□□□□ -0.33
RB1-204ENST00000484879 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
RB1-204ENST00000484879 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
RB1-204ENST00000484879 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
RB1-204ENST00000484879 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
RB1-204ENST00000484879 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
RB1-204ENST00000484879 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
RB1-204ENST00000484879 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
RB1-204ENST00000484879 WNT2BQ93097 391 aa12.97□□□□□ -0.33
RB1-204ENST00000484879 A0A0G2JS52 829 aa12.96□□□□□ -0.33
RB1-204ENST00000484879 CHGAP10645 457 aaKnown RBP12.96□□□□□ -0.33
RB1-204ENST00000484879 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
RB1-204ENST00000484879 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
RB1-204ENST00000484879 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
RB1-204ENST00000484879 PDE4AP27815 886 aa12.92□□□□□ -0.34
RB1-204ENST00000484879 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
RB1-204ENST00000484879 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
RB1-204ENST00000484879 EVI5O60447 810 aa12.9□□□□□ -0.34
RB1-204ENST00000484879 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
RB1-204ENST00000484879 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
RB1-204ENST00000484879 RABGEF1Q9UJ41 708 aa12.83□□□□□ -0.36
RB1-204ENST00000484879 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
RB1-204ENST00000484879 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
RB1-204ENST00000484879 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
RB1-204ENST00000484879 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
RB1-204ENST00000484879 DDX27Q96GQ7 796 aaKnown RBP12.8□□□□□ -0.36
RB1-204ENST00000484879 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
RB1-204ENST00000484879 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
RB1-204ENST00000484879 LAPTM4BQ86VI4 370 aa12.77□□□□□ -0.37
RB1-204ENST00000484879 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
RB1-204ENST00000484879 MFSD10Q14728 455 aa12.75□□□□□ -0.37
RB1-204ENST00000484879 PCDHGA10Q9Y5H3 936 aa12.75□□□□□ -0.37
RB1-204ENST00000484879 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms