RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 SETD1BQ9UPS6 1966 aaKnown RBP6.92□□□□□ -1.3
CAPN8-210ENST00000484873 ABCA9Q8IUA7 1624 aa6.92□□□□□ -1.3
CAPN8-210ENST00000484873 TRAPPC8Q9Y2L5 1435 aa6.92□□□□□ -1.3
CAPN8-210ENST00000484873 ZMYM4Q5VZL5 1548 aa6.91□□□□□ -1.3
CAPN8-210ENST00000484873 CAMSAP1Q5T5Y3 1602 aa6.91□□□□□ -1.3
CAPN8-210ENST00000484873 SIGLEC1Q9BZZ2 1709 aa6.91□□□□□ -1.3
CAPN8-210ENST00000484873 NCKAP5LQ9HCH0 1330 aa6.91□□□□□ -1.3
CAPN8-210ENST00000484873 IGF1RP08069 1367 aa6.91□□□□□ -1.3
CAPN8-210ENST00000484873 CPS1P31327 1500 aa6.91□□□□□ -1.3
CAPN8-210ENST00000484873 SENP3Q9H4L4 574 aaPredicted RBP6.9□□□□□ -1.3
CAPN8-210ENST00000484873 PPP6R1Q9UPN7 881 aa6.9□□□□□ -1.3
CAPN8-210ENST00000484873 SETD1AO15047 1707 aaKnown RBP6.9□□□□□ -1.31
CAPN8-210ENST00000484873 FOXD1Q16676 465 aa6.89□□□□□ -1.31
CAPN8-210ENST00000484873 RICTORQ6R327 1708 aa6.88□□□□□ -1.31
CAPN8-210ENST00000484873 UGGT2Q9NYU1 1516 aa6.88□□□□□ -1.31
CAPN8-210ENST00000484873 PLA2R1Q13018 1463 aa6.88□□□□□ -1.31
CAPN8-210ENST00000484873 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
CAPN8-210ENST00000484873 ESF1Q9H501 851 aaKnown RBP6.88□□□□□ -1.31
CAPN8-210ENST00000484873 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
CAPN8-210ENST00000484873 ATP10AO60312 1499 aa6.87□□□□□ -1.31
CAPN8-210ENST00000484873 EHMT2Q96KQ7 1210 aa6.87□□□□□ -1.31
CAPN8-210ENST00000484873 ABCA8O94911 1581 aa6.86□□□□□ -1.31
CAPN8-210ENST00000484873 TCOF1Q13428 1488 aaKnown RBP6.85□□□□□ -1.31
CAPN8-210ENST00000484873 CARMIL1Q5VZK9 1371 aa6.85□□□□□ -1.31
CAPN8-210ENST00000484873 RAPGEF2Q9Y4G8 1499 aa6.85□□□□□ -1.31
CAPN8-210ENST00000484873 KIF27Q86VH2 1401 aa6.84□□□□□ -1.31
CAPN8-210ENST00000484873 ALKQ9UM73 1620 aa6.84□□□□□ -1.31
CAPN8-210ENST00000484873 FAM9AQ8IZU1 332 aaPredicted RBP6.84□□□□□ -1.31
CAPN8-210ENST00000484873 ZRANB1Q9UGI0 708 aa6.84□□□□□ -1.31
CAPN8-210ENST00000484873 SHANK2Q9UPX8 1470 aa6.84□□□□□ -1.31
CAPN8-210ENST00000484873 NPATQ14207 1427 aa6.84□□□□□ -1.32
CAPN8-210ENST00000484873 CFAP74Q9C0B2 1584 aa6.83□□□□□ -1.32
CAPN8-210ENST00000484873 RBM33Q96EV2 1170 aaKnown RBP6.83□□□□□ -1.32
CAPN8-210ENST00000484873 C3P01024 1663 aa6.83□□□□□ -1.32
CAPN8-210ENST00000484873 HECW1Q76N89 1606 aa6.83□□□□□ -1.32
CAPN8-210ENST00000484873 ATP10BO94823 1461 aa6.82□□□□□ -1.32
CAPN8-210ENST00000484873 CNTLNQ9NXG0 1405 aa6.82□□□□□ -1.32
CAPN8-210ENST00000484873 ARID3CA6NKF2 412 aa6.81□□□□□ -1.32
CAPN8-210ENST00000484873 TRIM52Q96A61 297 aa6.81□□□□□ -1.32
CAPN8-210ENST00000484873 GOLGA3Q08378 1498 aa6.8□□□□□ -1.32
CAPN8-210ENST00000484873 ZNF772Q68DY9 489 aaPredicted RBP6.79□□□□□ -1.32
CAPN8-210ENST00000484873 SCAPERQ9BY12 1400 aa6.78□□□□□ -1.32
CAPN8-210ENST00000484873 RNF17Q9BXT8 1623 aaKnown RBP6.78□□□□□ -1.32
CAPN8-210ENST00000484873 AGLP35573 1532 aa6.77□□□□□ -1.33
CAPN8-210ENST00000484873 LRRC7Q96NW7 1537 aa6.77□□□□□ -1.33
CAPN8-210ENST00000484873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.77□□□□□ -1.33
CAPN8-210ENST00000484873 RXRBP28702 533 aa6.77□□□□□ -1.33
CAPN8-210ENST00000484873 HNRNPUL2Q1KMD3 747 aaKnown RBP6.77□□□□□ -1.33
CAPN8-210ENST00000484873 CDK12Q9NYV4 1490 aaPredicted RBP6.77□□□□□ -1.33
CAPN8-210ENST00000484873 CEP170BQ9Y4F5 1589 aaPredicted RBP6.76□□□□□ -1.33
CAPN8-210ENST00000484873 ZNF142P52746 1687 aaPredicted RBP6.76□□□□□ -1.33
CAPN8-210ENST00000484873 SETBP1Q9Y6X0 1596 aa6.75□□□□□ -1.33
CAPN8-210ENST00000484873 ZMYM3Q14202 1370 aa6.75□□□□□ -1.33
CAPN8-210ENST00000484873 KCNA4P22459 653 aa6.75□□□□□ -1.33
CAPN8-210ENST00000484873 FAM135BQ49AJ0 1406 aa6.75□□□□□ -1.33
CAPN8-210ENST00000484873 VWDEQ8N2E2 1590 aa6.74□□□□□ -1.33
CAPN8-210ENST00000484873 REREQ9P2R6 1566 aa6.74□□□□□ -1.33
CAPN8-210ENST00000484873 MYT1LQ9UL68 1186 aa6.74□□□□□ -1.33
CAPN8-210ENST00000484873 MYO3AQ8NEV4 1616 aa6.74□□□□□ -1.33
CAPN8-210ENST00000484873 SUPT6HQ7KZ85 1726 aaKnown RBP6.73□□□□□ -1.33
CAPN8-210ENST00000484873 ZNF518AQ6AHZ1 1483 aa6.73□□□□□ -1.33
CAPN8-210ENST00000484873 PLEKHD1A6NEE1 506 aa6.72□□□□□ -1.33
CAPN8-210ENST00000484873 YY1P25490 414 aa6.72□□□□□ -1.33
CAPN8-210ENST00000484873 MEX3CQ5U5Q3 659 aaKnown RBP6.72□□□□□ -1.33
CAPN8-210ENST00000484873 SYNMO15061 1565 aa6.72□□□□□ -1.33
CAPN8-210ENST00000484873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.71□□□□□ -1.33
CAPN8-210ENST00000484873 JCADQ9P266 1359 aa6.71□□□□□ -1.33
CAPN8-210ENST00000484873 NEURL4Q96JN8 1562 aa6.71□□□□□ -1.34
CAPN8-210ENST00000484873 ANKLE2Q86XL3 938 aa6.71□□□□□ -1.34
CAPN8-210ENST00000484873 A2ML1A8K2U0 1454 aa6.71□□□□□ -1.34
CAPN8-210ENST00000484873 MROH2AA6NES4 1674 aa6.71□□□□□ -1.34
CAPN8-210ENST00000484873 DIP2CQ9Y2E4 1556 aa6.7□□□□□ -1.34
CAPN8-210ENST00000484873 CDK13Q14004 1512 aaKnown RBP6.7□□□□□ -1.34
CAPN8-210ENST00000484873 PLCH2O75038 1416 aa6.69□□□□□ -1.34
CAPN8-210ENST00000484873 NUTM2BA6NNL0 878 aaPredicted RBP6.69□□□□□ -1.34
CAPN8-210ENST00000484873 NUTM2EB1AL46 878 aaPredicted RBP6.69□□□□□ -1.34
CAPN8-210ENST00000484873 ADRA2BP18089 450 aa6.69□□□□□ -1.34
CAPN8-210ENST00000484873 NUTM2DQ5VT03 806 aaPredicted RBP6.69□□□□□ -1.34
CAPN8-210ENST00000484873 NUTM2AQ8IVF1 878 aaPredicted RBP6.69□□□□□ -1.34
CAPN8-210ENST00000484873 SPATA31A6Q5VVP1 1343 aa6.69□□□□□ -1.34
CAPN8-210ENST00000484873 ATAD2Q6PL18 1390 aa6.69□□□□□ -1.34
CAPN8-210ENST00000484873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.69□□□□□ -1.34
CAPN8-210ENST00000484873 LRP5O75197 1615 aa6.68□□□□□ -1.34
CAPN8-210ENST00000484873 NPHP4O75161 1426 aaPredicted RBP6.68□□□□□ -1.34
CAPN8-210ENST00000484873 POLR1AO95602 1720 aaPredicted RBP6.68□□□□□ -1.34
CAPN8-210ENST00000484873 SENP3-EIF4A1A0A087X0R7 540 aa6.68□□□□□ -1.34
CAPN8-210ENST00000484873 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
CAPN8-210ENST00000484873 AFAP1Q8N556 730 aa6.68□□□□□ -1.34
CAPN8-210ENST00000484873 KDM5CP41229 1560 aa6.68□□□□□ -1.34
CAPN8-210ENST00000484873 DNMT1P26358 1616 aaKnown RBP6.68□□□□□ -1.34
CAPN8-210ENST00000484873 MED14O60244 1454 aa6.67□□□□□ -1.34
CAPN8-210ENST00000484873 CCDC125Q86Z20 511 aa6.67□□□□□ -1.34
CAPN8-210ENST00000484873 MLH3Q9UHC1 1453 aa6.66□□□□□ -1.34
CAPN8-210ENST00000484873 RAPGEF6Q8TEU7 1601 aa6.66□□□□□ -1.34
CAPN8-210ENST00000484873 RGS12O14924 1447 aa6.66□□□□□ -1.34
CAPN8-210ENST00000484873 THEMISQ8N1K5 641 aaPredicted RBP6.65□□□□□ -1.34
CAPN8-210ENST00000484873 LRP6O75581 1613 aa6.65□□□□□ -1.35
CAPN8-210ENST00000484873 ABCA6Q8N139 1617 aa6.65□□□□□ -1.35
CAPN8-210ENST00000484873 RBM6P78332 1123 aaKnown RBP6.64□□□□□ -1.35
CAPN8-210ENST00000484873 FGD6Q6ZV73 1430 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms