RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 RAPGEF3O95398 923 aa22.17■■□□□ 1.14
SNX5-212ENST00000484809 PIAS4Q8N2W9 510 aaPredicted RBP22.17■■□□□ 1.14
SNX5-212ENST00000484809 DENND4BO75064 1496 aaPredicted RBP22.14■■□□□ 1.14
SNX5-212ENST00000484809 CDC42BPBQ9Y5S2 1711 aa22.13■■□□□ 1.13
SNX5-212ENST00000484809 ADGRL1O94910 1474 aa22.13■■□□□ 1.13
SNX5-212ENST00000484809 EFCAB2Q5VUJ9 269 aa22.1■■□□□ 1.13
SNX5-212ENST00000484809 CDC42BPAQ5VT25 1732 aa22.08■■□□□ 1.13
SNX5-212ENST00000484809 PREX2Q70Z35 1606 aa22.08■■□□□ 1.13
SNX5-212ENST00000484809 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.12
SNX5-212ENST00000484809 ZMYM4Q5VZL5 1548 aa22.07■■□□□ 1.12
SNX5-212ENST00000484809 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
SNX5-212ENST00000484809 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
SNX5-212ENST00000484809 POGZQ7Z3K3 1410 aa22.02■■□□□ 1.12
SNX5-212ENST00000484809 MTUS2Q5JR59 1369 aa22■■□□□ 1.11
SNX5-212ENST00000484809 MAGI2Q86UL8 1455 aa21.99■■□□□ 1.11
SNX5-212ENST00000484809 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
SNX5-212ENST00000484809 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
SNX5-212ENST00000484809 EHBP1L1Q8N3D4 1523 aa21.97■■□□□ 1.11
SNX5-212ENST00000484809 GPATCH8Q9UKJ3 1502 aaKnown RBP21.97■■□□□ 1.11
SNX5-212ENST00000484809 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
SNX5-212ENST00000484809 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
SNX5-212ENST00000484809 ABCC1P33527 1531 aa21.96■■□□□ 1.11
SNX5-212ENST00000484809 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
SNX5-212ENST00000484809 KDM5CP41229 1560 aa21.95■■□□□ 1.1
SNX5-212ENST00000484809 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
SNX5-212ENST00000484809 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
SNX5-212ENST00000484809 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
SNX5-212ENST00000484809 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
SNX5-212ENST00000484809 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
SNX5-212ENST00000484809 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
SNX5-212ENST00000484809 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
SNX5-212ENST00000484809 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
SNX5-212ENST00000484809 HECW2Q9P2P5 1572 aa21.9■■□□□ 1.1
SNX5-212ENST00000484809 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.09
SNX5-212ENST00000484809 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.09
SNX5-212ENST00000484809 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
SNX5-212ENST00000484809 ATP10AO60312 1499 aa21.87■■□□□ 1.09
SNX5-212ENST00000484809 CFDP1Q9UEE9 299 aaPredicted RBP21.86■■□□□ 1.09
SNX5-212ENST00000484809 ZNF777Q9ULD5 760 aaPredicted RBP21.86■■□□□ 1.09
SNX5-212ENST00000484809 MLH3Q9UHC1 1453 aa21.86■■□□□ 1.09
SNX5-212ENST00000484809 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
SNX5-212ENST00000484809 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
SNX5-212ENST00000484809 MADDQ8WXG6 1647 aa21.84■■□□□ 1.09
SNX5-212ENST00000484809 KIDINS220Q9ULH0 1771 aa21.84■■□□□ 1.09
SNX5-212ENST00000484809 C9orf84Q5VXU9 1444 aa21.83■■□□□ 1.09
SNX5-212ENST00000484809 DIP2CQ9Y2E4 1556 aa21.83■■□□□ 1.08
SNX5-212ENST00000484809 NCOA2Q15596 1464 aa21.83■■□□□ 1.08
SNX5-212ENST00000484809 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.08
SNX5-212ENST00000484809 PLEKHH2Q8IVE3 1493 aa21.83■■□□□ 1.08
SNX5-212ENST00000484809 KIAA1107Q9UPP5 1409 aa21.83■■□□□ 1.08
SNX5-212ENST00000484809 ABCA6Q8N139 1617 aa21.82■■□□□ 1.08
SNX5-212ENST00000484809 REREQ9P2R6 1566 aa21.8■■□□□ 1.08
SNX5-212ENST00000484809 MSH5O43196 834 aa21.8■■□□□ 1.08
SNX5-212ENST00000484809 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.08
SNX5-212ENST00000484809 MYT1LQ9UL68 1186 aa21.8■■□□□ 1.08
SNX5-212ENST00000484809 PTPRMP28827 1452 aa21.79■■□□□ 1.08
SNX5-212ENST00000484809 RIMS1Q86UR5 1692 aaKnown RBP21.78■■□□□ 1.08
SNX5-212ENST00000484809 FER1L4A9Z1Z3 1794 aa21.77■■□□□ 1.07
SNX5-212ENST00000484809 ZNF644Q9H582 1327 aaPredicted RBP21.76■■□□□ 1.07
SNX5-212ENST00000484809 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
SNX5-212ENST00000484809 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
SNX5-212ENST00000484809 MLECQ14165 292 aa21.73■■□□□ 1.07
SNX5-212ENST00000484809 MBD5Q9P267 1494 aa21.73■■□□□ 1.07
SNX5-212ENST00000484809 INO80Q9ULG1 1556 aaPredicted RBP21.73■■□□□ 1.07
SNX5-212ENST00000484809 ATP7AQ04656 1500 aa21.72■■□□□ 1.07
SNX5-212ENST00000484809 AGLP35573 1532 aa21.71■■□□□ 1.07
SNX5-212ENST00000484809 CAMSAP2Q08AD1 1489 aa21.69■■□□□ 1.06
SNX5-212ENST00000484809 APLP2Q06481 763 aa21.68■■□□□ 1.06
SNX5-212ENST00000484809 ADGBQ8N7X0 1667 aa21.65■■□□□ 1.06
SNX5-212ENST00000484809 MYOM3Q5VTT5 1437 aa21.64■■□□□ 1.05
SNX5-212ENST00000484809 CCDC141Q6ZP82 1450 aa21.63■■□□□ 1.05
SNX5-212ENST00000484809 ARHGEF5Q12774 1597 aa21.63■■□□□ 1.05
SNX5-212ENST00000484809 RTEL1-TNFRSF6BF6WH68 1400 aa21.63■■□□□ 1.05
SNX5-212ENST00000484809 PLXNC1O60486 1568 aa21.62■■□□□ 1.05
SNX5-212ENST00000484809 RSPH4AQ5TD94 716 aa21.62■■□□□ 1.05
SNX5-212ENST00000484809 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
SNX5-212ENST00000484809 A2MP01023 1474 aa21.61■■□□□ 1.05
SNX5-212ENST00000484809 SETD1BQ9UPS6 1966 aaKnown RBP21.58■■□□□ 1.05
SNX5-212ENST00000484809 C3P01024 1663 aa21.56■■□□□ 1.04
SNX5-212ENST00000484809 LMTK3Q96Q04 1460 aa21.54■■□□□ 1.04
SNX5-212ENST00000484809 TSPY4P0CV99 314 aa21.53■■□□□ 1.04
SNX5-212ENST00000484809 TSPY10P0CW01 314 aa21.53■■□□□ 1.04
SNX5-212ENST00000484809 CEBPAP49715 358 aaPredicted RBP21.53■■□□□ 1.04
SNX5-212ENST00000484809 PTPN23Q9H3S7 1636 aa21.53■■□□□ 1.04
SNX5-212ENST00000484809 MAST1Q9Y2H9 1570 aa21.52■■□□□ 1.04
SNX5-212ENST00000484809 MROH2AA6NES4 1674 aa21.52■■□□□ 1.04
SNX5-212ENST00000484809 DHX29Q7Z478 1369 aaKnown RBP21.51■■□□□ 1.03
SNX5-212ENST00000484809 CNTLNQ9NXG0 1405 aa21.51■■□□□ 1.03
SNX5-212ENST00000484809 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
SNX5-212ENST00000484809 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
SNX5-212ENST00000484809 CLTCQ00610 1675 aaKnown RBP21.48■■□□□ 1.03
SNX5-212ENST00000484809 FGD6Q6ZV73 1430 aa21.48■■□□□ 1.03
SNX5-212ENST00000484809 CROCC2H7BZ55 1655 aa21.47■■□□□ 1.03
SNX5-212ENST00000484809 TCOF1Q13428 1488 aaKnown RBP21.47■■□□□ 1.03
SNX5-212ENST00000484809 GGT6Q6P531 493 aa21.46■■□□□ 1.03
SNX5-212ENST00000484809 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
SNX5-212ENST00000484809 ZMYM3Q14202 1370 aa21.42■■□□□ 1.02
SNX5-212ENST00000484809 ABCC5O15440 1437 aa21.42■■□□□ 1.02
SNX5-212ENST00000484809 KIF3BO15066 747 aa21.41■■□□□ 1.02
SNX5-212ENST00000484809 SHANK2Q9UPX8 1470 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms