RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	ARHGAP5	Q13017	1502 aa		12.2	□□□□□ -0.46
SFI1-223	ENST00000484806	GLI2	P10070	1586 aa		12.19	□□□□□ -0.46
SFI1-223	ENST00000484806	FAM50A	Q14320	339 aa	Known RBP	12.19	□□□□□ -0.46
SFI1-223	ENST00000484806	PCGF6	Q9BYE7	350 aa		12.19	□□□□□ -0.46
SFI1-223	ENST00000484806	CDC42BPB	Q9Y5S2	1711 aa		12.19	□□□□□ -0.46
SFI1-223	ENST00000484806	PLEKHH2	Q8IVE3	1493 aa		12.19	□□□□□ -0.46
SFI1-223	ENST00000484806	PLCH2	O75038	1416 aa		12.18	□□□□□ -0.46
SFI1-223	ENST00000484806	CAMSAP2	Q08AD1	1489 aa		12.17	□□□□□ -0.46
SFI1-223	ENST00000484806	DIP2B	Q9P265	1576 aa		12.17	□□□□□ -0.46
SFI1-223	ENST00000484806	CD109	Q6YHK3	1445 aa		12.15	□□□□□ -0.46
SFI1-223	ENST00000484806	EFCAB2	Q5VUJ9	269 aa		12.15	□□□□□ -0.46
SFI1-223	ENST00000484806	SENP3	Q9H4L4	574 aa	Predicted RBP	12.15	□□□□□ -0.46
SFI1-223	ENST00000484806	DNMT1	P26358	1616 aa	Known RBP	12.14	□□□□□ -0.47
SFI1-223	ENST00000484806	MAP3K4	Q9Y6R4	1608 aa		12.14	□□□□□ -0.47
SFI1-223	ENST00000484806	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.13	□□□□□ -0.47
SFI1-223	ENST00000484806	FANCA	O15360	1455 aa		12.13	□□□□□ -0.47
SFI1-223	ENST00000484806	ARHGEF5	Q12774	1597 aa		12.13	□□□□□ -0.47
SFI1-223	ENST00000484806	SAMD9L	Q8IVG5	1584 aa		12.13	□□□□□ -0.47
SFI1-223	ENST00000484806	KIAA1107	Q9UPP5	1409 aa		12.11	□□□□□ -0.47
SFI1-223	ENST00000484806	CROCC2	H7BZ55	1655 aa		12.11	□□□□□ -0.47
SFI1-223	ENST00000484806	TEX14	Q8IWB6	1497 aa		12.11	□□□□□ -0.47
SFI1-223	ENST00000484806	FAM69C	Q0P6D2	419 aa		12.11	□□□□□ -0.47
SFI1-223	ENST00000484806	RSPH4A	Q5TD94	716 aa		12.11	□□□□□ -0.47
SFI1-223	ENST00000484806	ABCC1	P33527	1531 aa		12.11	□□□□□ -0.47
SFI1-223	ENST00000484806	CCDC141	Q6ZP82	1450 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	NEO1	Q92859	1461 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	SHANK2	Q9UPX8	1470 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	KIF13A	Q9H1H9	1805 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	SYCP2	Q9BX26	1530 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	DAPK1	P53355	1430 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	ADGB	Q8N7X0	1667 aa		12.1	□□□□□ -0.47
SFI1-223	ENST00000484806	ITGAE	P38570	1179 aa		12.09	□□□□□ -0.47
SFI1-223	ENST00000484806	AKNA	Q7Z591	1439 aa		12.08	□□□□□ -0.48
SFI1-223	ENST00000484806	ADGRL1	O94910	1474 aa		12.08	□□□□□ -0.48
SFI1-223	ENST00000484806	TSPY4	P0CV99	314 aa		12.07	□□□□□ -0.48
SFI1-223	ENST00000484806	TSPY10	P0CW01	314 aa		12.07	□□□□□ -0.48
SFI1-223	ENST00000484806	ZNF644	Q9H582	1327 aa	Predicted RBP	12.07	□□□□□ -0.48
SFI1-223	ENST00000484806	TSPOAP1	O95153	1857 aa		12.06	□□□□□ -0.48
SFI1-223	ENST00000484806	ABCC5	O15440	1437 aa		12.06	□□□□□ -0.48
SFI1-223	ENST00000484806	ROCK1	Q13464	1354 aa		12.05	□□□□□ -0.48
SFI1-223	ENST00000484806	MAST1	Q9Y2H9	1570 aa		12.05	□□□□□ -0.48
SFI1-223	ENST00000484806	MBD5	Q9P267	1494 aa		12.05	□□□□□ -0.48
SFI1-223	ENST00000484806	C9orf84	Q5VXU9	1444 aa		12.04	□□□□□ -0.48
SFI1-223	ENST00000484806	GCC2	Q8IWJ2	1684 aa		12.04	□□□□□ -0.48
SFI1-223	ENST00000484806	ADGRL2	O95490	1459 aa		12.04	□□□□□ -0.48
SFI1-223	ENST00000484806	ZNF518A	Q6AHZ1	1483 aa		12.04	□□□□□ -0.48
SFI1-223	ENST00000484806	ANKRD30A	Q9BXX3	1397 aa		12.04	□□□□□ -0.48
SFI1-223	ENST00000484806	PPRC1	Q5VV67	1664 aa	Known RBP	12.03	□□□□□ -0.48
SFI1-223	ENST00000484806	HFM1	A2PYH4	1435 aa		12.03	□□□□□ -0.48
SFI1-223	ENST00000484806	SCAPER	Q9BY12	1400 aa		12.03	□□□□□ -0.48
SFI1-223	ENST00000484806	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
SFI1-223	ENST00000484806	ACIN1	Q9UKV3	1341 aa	Known RBP	12.03	□□□□□ -0.48
SFI1-223	ENST00000484806	SETD5	Q9C0A6	1442 aa		12.02	□□□□□ -0.49
SFI1-223	ENST00000484806	DENND4B	O75064	1496 aa	Predicted RBP	12.02	□□□□□ -0.49
SFI1-223	ENST00000484806	PLXNC1	O60486	1568 aa		12.01	□□□□□ -0.49
SFI1-223	ENST00000484806	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.01	□□□□□ -0.49
SFI1-223	ENST00000484806	PTPRK	Q15262	1439 aa		12.01	□□□□□ -0.49
SFI1-223	ENST00000484806	POGZ	Q7Z3K3	1410 aa		12.01	□□□□□ -0.49
SFI1-223	ENST00000484806	ARHGEF12	Q9NZN5	1544 aa		12.01	□□□□□ -0.49
SFI1-223	ENST00000484806	CHIC2	Q9UKJ5	165 aa		12	□□□□□ -0.49
SFI1-223	ENST00000484806	TRH	P20396	242 aa	Predicted RBP	11.99	□□□□□ -0.49
SFI1-223	ENST00000484806	SPAG9	O60271	1321 aa	Known RBP	11.99	□□□□□ -0.49
SFI1-223	ENST00000484806	TRAPPC8	Q9Y2L5	1435 aa		11.99	□□□□□ -0.49
SFI1-223	ENST00000484806	KDM5C	P41229	1560 aa		11.99	□□□□□ -0.49
SFI1-223	ENST00000484806	HECW2	Q9P2P5	1572 aa		11.98	□□□□□ -0.49
SFI1-223	ENST00000484806	INO80	Q9ULG1	1556 aa	Predicted RBP	11.98	□□□□□ -0.49
SFI1-223	ENST00000484806	ATP7A	Q04656	1500 aa		11.98	□□□□□ -0.49
SFI1-223	ENST00000484806	ZFYVE16	Q7Z3T8	1539 aa		11.98	□□□□□ -0.49
SFI1-223	ENST00000484806	NAIP	Q13075	1403 aa		11.98	□□□□□ -0.49
SFI1-223	ENST00000484806	NCOA1	Q15788	1441 aa		11.98	□□□□□ -0.49
SFI1-223	ENST00000484806	RICTOR	Q6R327	1708 aa		11.97	□□□□□ -0.49
SFI1-223	ENST00000484806	KIF15	Q9NS87	1388 aa		11.97	□□□□□ -0.49
SFI1-223	ENST00000484806	HRC	P23327	699 aa		11.97	□□□□□ -0.49
SFI1-223	ENST00000484806	RAB3GAP2	Q9H2M9	1393 aa		11.96	□□□□□ -0.49
SFI1-223	ENST00000484806	MYT1L	Q9UL68	1186 aa		11.96	□□□□□ -0.49
SFI1-223	ENST00000484806	DUOX2	Q9NRD8	1548 aa		11.96	□□□□□ -0.5
SFI1-223	ENST00000484806	PHF23	Q9BUL5	403 aa	Predicted RBP	11.95	□□□□□ -0.5
SFI1-223	ENST00000484806	RRP7BP	Q9NSQ0	103 aa		11.95	□□□□□ -0.5
SFI1-223	ENST00000484806	ZMYM4	Q5VZL5	1548 aa		11.95	□□□□□ -0.5
SFI1-223	ENST00000484806	MLH3	Q9UHC1	1453 aa		11.95	□□□□□ -0.5
SFI1-223	ENST00000484806	MAGI2	Q86UL8	1455 aa		11.94	□□□□□ -0.5
SFI1-223	ENST00000484806	ERBIN	Q96RT1	1412 aa		11.94	□□□□□ -0.5
SFI1-223	ENST00000484806	ANKRD50	Q9ULJ7	1429 aa		11.94	□□□□□ -0.5
SFI1-223	ENST00000484806	KIDINS220	Q9ULH0	1771 aa		11.93	□□□□□ -0.5
SFI1-223	ENST00000484806	AFAP1	Q8N556	730 aa		11.93	□□□□□ -0.5
SFI1-223	ENST00000484806	FRMPD1	Q5SYB0	1578 aa		11.92	□□□□□ -0.5
SFI1-223	ENST00000484806	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.91	□□□□□ -0.5
SFI1-223	ENST00000484806	KDM6B	O15054	1643 aa		11.89	□□□□□ -0.51
SFI1-223	ENST00000484806	RAPGEF3	O95398	923 aa		11.89	□□□□□ -0.51
SFI1-223	ENST00000484806	ABCA6	Q8N139	1617 aa		11.89	□□□□□ -0.51
SFI1-223	ENST00000484806	A2M	P01023	1474 aa		11.88	□□□□□ -0.51
SFI1-223	ENST00000484806	DIP2C	Q9Y2E4	1556 aa		11.88	□□□□□ -0.51
SFI1-223	ENST00000484806	ARHGEF40	Q8TER5	1519 aa		11.87	□□□□□ -0.51
SFI1-223	ENST00000484806	CCER1	Q8TC90	406 aa	Predicted RBP	11.87	□□□□□ -0.51
SFI1-223	ENST00000484806	DHX29	Q7Z478	1369 aa	Known RBP	11.87	□□□□□ -0.51
SFI1-223	ENST00000484806	TRIM52	Q96A61	297 aa		11.86	□□□□□ -0.51
SFI1-223	ENST00000484806	UNC13B	O14795	1591 aa		11.86	□□□□□ -0.51
SFI1-223	ENST00000484806	RERE	Q9P2R6	1566 aa		11.86	□□□□□ -0.51
SFI1-223	ENST00000484806	KDM5D	Q9BY66	1539 aa		11.86	□□□□□ -0.51
SFI1-223	ENST00000484806	CLSPN	Q9HAW4	1339 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms