RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
HLA-F-226ENST00000484704 RICTORQ6R327 1708 aa24.06■■□□□ 1.44
HLA-F-226ENST00000484704 FYCO1Q9BQS8 1478 aa24.06■■□□□ 1.44
HLA-F-226ENST00000484704 TTC37Q6PGP7 1564 aa24.05■■□□□ 1.44
HLA-F-226ENST00000484704 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
HLA-F-226ENST00000484704 LRRIQ1Q96JM4 1722 aa24.04■■□□□ 1.44
HLA-F-226ENST00000484704 TROQ12816 1431 aaPredicted RBP24.03■■□□□ 1.44
HLA-F-226ENST00000484704 RIMS1Q86UR5 1692 aaKnown RBP24.03■■□□□ 1.44
HLA-F-226ENST00000484704 KIF14Q15058 1648 aa24.02■■□□□ 1.44
HLA-F-226ENST00000484704 CFAP74Q9C0B2 1584 aa24.02■■□□□ 1.44
HLA-F-226ENST00000484704 SCAPERQ9BY12 1400 aa24■■□□□ 1.43
HLA-F-226ENST00000484704 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
HLA-F-226ENST00000484704 POGZQ7Z3K3 1410 aa23.98■■□□□ 1.43
HLA-F-226ENST00000484704 ZFYVE16Q7Z3T8 1539 aa23.98■■□□□ 1.43
HLA-F-226ENST00000484704 PLCH2O75038 1416 aa23.97■■□□□ 1.43
HLA-F-226ENST00000484704 ZMYM4Q5VZL5 1548 aa23.96■■□□□ 1.43
HLA-F-226ENST00000484704 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
HLA-F-226ENST00000484704 EFCAB2Q5VUJ9 269 aa23.94■■□□□ 1.42
HLA-F-226ENST00000484704 MAGI2Q86UL8 1455 aa23.94■■□□□ 1.42
HLA-F-226ENST00000484704 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
HLA-F-226ENST00000484704 ARHGAP5Q13017 1502 aa23.9■■□□□ 1.42
HLA-F-226ENST00000484704 ATP10AO60312 1499 aa23.87■■□□□ 1.41
HLA-F-226ENST00000484704 AFAP1Q8N556 730 aa23.87■■□□□ 1.41
HLA-F-226ENST00000484704 MTUS2Q5JR59 1369 aa23.87■■□□□ 1.41
HLA-F-226ENST00000484704 CERKQ8TCT0 537 aa23.85■■□□□ 1.41
HLA-F-226ENST00000484704 MYT1LQ9UL68 1186 aa23.82■■□□□ 1.4
HLA-F-226ENST00000484704 C9orf84Q5VXU9 1444 aa23.81■■□□□ 1.4
HLA-F-226ENST00000484704 ARHGEF12Q9NZN5 1544 aa23.8■■□□□ 1.4
HLA-F-226ENST00000484704 FER1L4A9Z1Z3 1794 aa23.8■■□□□ 1.4
HLA-F-226ENST00000484704 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
HLA-F-226ENST00000484704 ZNF777Q9ULD5 760 aaPredicted RBP23.78■■□□□ 1.4
HLA-F-226ENST00000484704 CDC42BPBQ9Y5S2 1711 aa23.78■■□□□ 1.4
HLA-F-226ENST00000484704 VPS8Q8N3P4 1428 aa23.77■■□□□ 1.4
HLA-F-226ENST00000484704 CCNB3Q8WWL7 1395 aa23.77■■□□□ 1.4
HLA-F-226ENST00000484704 EHBP1L1Q8N3D4 1523 aa23.75■■□□□ 1.39
HLA-F-226ENST00000484704 CDC42BPAQ5VT25 1732 aa23.74■■□□□ 1.39
HLA-F-226ENST00000484704 ZNF518AQ6AHZ1 1483 aa23.74■■□□□ 1.39
HLA-F-226ENST00000484704 CFDP1Q9UEE9 299 aaPredicted RBP23.71■■□□□ 1.39
HLA-F-226ENST00000484704 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
HLA-F-226ENST00000484704 APLP2Q06481 763 aa23.68■■□□□ 1.38
HLA-F-226ENST00000484704 KDM5CP41229 1560 aa23.68■■□□□ 1.38
HLA-F-226ENST00000484704 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
HLA-F-226ENST00000484704 TIAM1Q13009 1591 aa23.67■■□□□ 1.38
HLA-F-226ENST00000484704 ABCC1P33527 1531 aa23.66■■□□□ 1.38
HLA-F-226ENST00000484704 DIP2CQ9Y2E4 1556 aa23.65■■□□□ 1.38
HLA-F-226ENST00000484704 PREX1Q8TCU6 1659 aa23.65■■□□□ 1.38
HLA-F-226ENST00000484704 ITSN2Q9NZM3 1697 aa23.64■■□□□ 1.38
HLA-F-226ENST00000484704 DMRT2Q9Y5R5 561 aa23.64■■□□□ 1.37
HLA-F-226ENST00000484704 SUPT6HQ7KZ85 1726 aaKnown RBP23.64■■□□□ 1.37
HLA-F-226ENST00000484704 UHRF1BP1Q6BDS2 1440 aa23.63■■□□□ 1.37
HLA-F-226ENST00000484704 MLH3Q9UHC1 1453 aa23.62■■□□□ 1.37
HLA-F-226ENST00000484704 STRCQ7RTU9 1775 aa23.62■■□□□ 1.37
HLA-F-226ENST00000484704 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
HLA-F-226ENST00000484704 SAMD9LQ8IVG5 1584 aa23.61■■□□□ 1.37
HLA-F-226ENST00000484704 ABCA6Q8N139 1617 aa23.6■■□□□ 1.37
HLA-F-226ENST00000484704 HNRNPMP52272 730 aaKnown RBP eCLIP23.6■■□□□ 1.37
HLA-F-226ENST00000484704 SYCP2Q9BX26 1530 aa23.59■■□□□ 1.37
HLA-F-226ENST00000484704 ESF1Q9H501 851 aaKnown RBP23.59■■□□□ 1.37
HLA-F-226ENST00000484704 NCOA2Q15596 1464 aa23.59■■□□□ 1.37
HLA-F-226ENST00000484704 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
HLA-F-226ENST00000484704 REREQ9P2R6 1566 aa23.57■■□□□ 1.36
HLA-F-226ENST00000484704 SETD1BQ9UPS6 1966 aaKnown RBP23.55■■□□□ 1.36
HLA-F-226ENST00000484704 SPAG9O60271 1321 aaKnown RBP23.55■■□□□ 1.36
HLA-F-226ENST00000484704 AGLP35573 1532 aa23.54■■□□□ 1.36
HLA-F-226ENST00000484704 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
HLA-F-226ENST00000484704 KIAA1107Q9UPP5 1409 aa23.54■■□□□ 1.36
HLA-F-226ENST00000484704 C3P01024 1663 aa23.53■■□□□ 1.36
HLA-F-226ENST00000484704 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
HLA-F-226ENST00000484704 ZNF644Q9H582 1327 aaPredicted RBP23.52■■□□□ 1.36
HLA-F-226ENST00000484704 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
HLA-F-226ENST00000484704 PTPRTO14522 1441 aa23.5■■□□□ 1.35
HLA-F-226ENST00000484704 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
HLA-F-226ENST00000484704 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
HLA-F-226ENST00000484704 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.34
HLA-F-226ENST00000484704 ZMYM3Q14202 1370 aa23.45■■□□□ 1.34
HLA-F-226ENST00000484704 ATP7AQ04656 1500 aa23.44■■□□□ 1.34
HLA-F-226ENST00000484704 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
HLA-F-226ENST00000484704 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
HLA-F-226ENST00000484704 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
HLA-F-226ENST00000484704 LTBP4Q8N2S1 1624 aa23.41■■□□□ 1.34
HLA-F-226ENST00000484704 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
HLA-F-226ENST00000484704 CCDC141Q6ZP82 1450 aa23.39■■□□□ 1.34
HLA-F-226ENST00000484704 MBD5Q9P267 1494 aa23.39■■□□□ 1.34
HLA-F-226ENST00000484704 MYOM3Q5VTT5 1437 aa23.39■■□□□ 1.33
HLA-F-226ENST00000484704 INO80Q9ULG1 1556 aaPredicted RBP23.39■■□□□ 1.33
HLA-F-226ENST00000484704 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
HLA-F-226ENST00000484704 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
HLA-F-226ENST00000484704 GGT6Q6P531 493 aa23.38■■□□□ 1.33
HLA-F-226ENST00000484704 NPATQ14207 1427 aa23.37■■□□□ 1.33
HLA-F-226ENST00000484704 CAMSAP1Q5T5Y3 1602 aa23.36■■□□□ 1.33
HLA-F-226ENST00000484704 A2MP01023 1474 aa23.36■■□□□ 1.33
HLA-F-226ENST00000484704 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
HLA-F-226ENST00000484704 ZNF335Q9H4Z2 1342 aaPredicted RBP23.34■■□□□ 1.33
HLA-F-226ENST00000484704 RTEL1-TNFRSF6BF6WH68 1400 aa23.33■■□□□ 1.33
HLA-F-226ENST00000484704 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
HLA-F-226ENST00000484704 SOCS7O14512 581 aa23.32■■□□□ 1.32
HLA-F-226ENST00000484704 ARHGEF5Q12774 1597 aa23.31■■□□□ 1.32
HLA-F-226ENST00000484704 PTPRKQ15262 1439 aa23.3■■□□□ 1.32
HLA-F-226ENST00000484704 MROH2AA6NES4 1674 aa23.29■■□□□ 1.32
HLA-F-226ENST00000484704 CLTCQ00610 1675 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms